Literature DB >> 28809003

Preparation of Disease-Related Protein Assemblies for Single Particle Electron Microscopy.

A Cameron Varano1,2, Naoe Harafuji3,4, William Dearnaley1, Lisa Guay-Woodford3,4, Deborah F Kelly5,6.   

Abstract

Electron microscopy (EM) is a rapidly growing area of structural biology that permits us to decode biological assemblies at the nanoscale. To examine biological materials for single particle EM analysis, purified assemblies must be obtained using biochemical separation techniques. Here, we describe effective methodologies for isolating histidine (his)-tagged protein assemblies from the nucleus of disease-relevant cell lines. We further demonstrate how isolated assemblies are visualized using single particle EM techniques and provide representative results for each step in the process.

Entities:  

Keywords:  Electron microscopy; Fibrocystin; Histidine tag; Recombinant proteins; Single particle analysis

Mesh:

Substances:

Year:  2017        PMID: 28809003      PMCID: PMC5609838          DOI: 10.1007/978-1-4939-7201-2_12

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  9 in total

Review 1.  Retrospective on the early development of cryoelectron microscopy of macromolecules and a prospective on opportunities for the future.

Authors:  Kenneth A Taylor; Robert M Glaeser
Journal:  J Struct Biol       Date:  2008-06-19       Impact factor: 2.867

2.  SPIDER and WEB: processing and visualization of images in 3D electron microscopy and related fields.

Authors:  J Frank; M Radermacher; P Penczek; J Zhu; Y Li; M Ladjadj; A Leith
Journal:  J Struct Biol       Date:  1996 Jan-Feb       Impact factor: 2.867

3.  Autosomal recessive polycystic kidney disease: the prototype of the hepato-renal fibrocystic diseases.

Authors:  Lisa M Guay-Woodford
Journal:  J Pediatr Genet       Date:  2014

4.  Intragenic motifs regulate the transcriptional complexity of Pkhd1/PKHD1.

Authors:  Ravindra Boddu; Chaozhe Yang; Amber K O'Connor; Robert Curtis Hendrickson; Braden Boone; Xiangqin Cui; Miguel Garcia-Gonzalez; Peter Igarashi; Luiz F Onuchic; Gregory G Germino; Lisa M Guay-Woodford
Journal:  J Mol Med (Berl)       Date:  2014-07-03       Impact factor: 4.599

5.  Polycystin-2 expression is regulated by a PC2-binding domain in the intracellular portion of fibrocystin.

Authors:  Ingyu Kim; Cunxi Li; Dan Liang; Xing-Zhen Chen; Robert J Coffy; Jie Ma; Ping Zhao; Guanqing Wu
Journal:  J Biol Chem       Date:  2008-09-09       Impact factor: 5.157

6.  An osmotically tolerant inner medullary collecting duct cell line from an SV40 transgenic mouse.

Authors:  M I Rauchman; S K Nigam; E Delpire; S R Gullans
Journal:  Am J Physiol       Date:  1993-09

7.  A Bayesian view on cryo-EM structure determination.

Authors:  Sjors H W Scheres
Journal:  J Mol Biol       Date:  2011-11-12       Impact factor: 5.469

8.  A Molecular Toolkit to Visualize Native Protein Assemblies in the Context of Human Disease.

Authors:  Brian L Gilmore; Carly E Winton; Andrew C Demmert; Justin R Tanner; Sam Bowman; Vasilea Karageorge; Kaya Patel; Zhi Sheng; Deborah F Kelly
Journal:  Sci Rep       Date:  2015-09-23       Impact factor: 4.379

9.  A microchip platform for structural oncology applications.

Authors:  Carly E Winton; Brian L Gilmore; Andrew C Demmert; Vasilea Karageorge; Zhi Sheng; Deborah F Kelly
Journal:  NPJ Breast Cancer       Date:  2016-06-15
  9 in total

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