Literature DB >> 28808667

Process Information and Evolution.

Erick Chastain1, Cameron Smith2.   

Abstract

Universal Semantic Communication (USC) is a theory that models communication among agents without the assumption of a fixed protocol. We demonstrate a connection, via a concept we refer to as process information, between a special case of USC and evolutionary processes. In this context, one agent attempts to interpret a potentially arbitrary signal produced within its environment. Sources of this effective signal can be modeled as a single alternative agent. Given a set of common underlying concepts that may be symbolized differently by different sources in the environment, any given entity must be able to correlate intrinsic information with input it receives from the environment in order to accurately interpret the ambient signal and ultimately coordinate its own actions. This scenario encapsulates a class of USC problems that provides insight into the semantic aspect of a model of evolution proposed by Rivoire and Leibler. Through this connection, we show that evolution corresponds to a means of solving a special class of USC problems, can be viewed as a special case of the Multiplicative Weights Updates algorithm, and that infinite population selection with no mutation and no recombination conforms to the Rivoire-Leibler model. Finally, using process information we show that evolving populations implicitly internalize semantic information about their respective environments.

Entities:  

Keywords:  Algorithms; Biological information theory; Evolution (biology); Genetics; Information theory; Learning systems; Semantics

Year:  2016        PMID: 28808667      PMCID: PMC5553987          DOI: 10.1109/TMBMC.2017.2655024

Source DB:  PubMed          Journal:  IEEE Trans Mol Biol Multiscale Commun        ISSN: 2332-7804


  7 in total

1.  A theory of pragmatic information and its application to the quasi-species model of biological evolution.

Authors:  Edward D Weinberger
Journal:  Biosystems       Date:  2002 Aug-Sep       Impact factor: 1.973

2.  Functional information: Molecular messages.

Authors:  Jack W Szostak
Journal:  Nature       Date:  2003-06-12       Impact factor: 49.962

3.  Phenotypic diversity, population growth, and information in fluctuating environments.

Authors:  Edo Kussell; Stanislas Leibler
Journal:  Science       Date:  2005-08-25       Impact factor: 47.728

4.  Algorithms, games, and evolution.

Authors:  Erick Chastain; Adi Livnat; Christos Papadimitriou; Umesh Vazirani
Journal:  Proc Natl Acad Sci U S A       Date:  2014-06-16       Impact factor: 11.205

Review 5.  Cellular noise and information transmission.

Authors:  Andre Levchenko; Ilya Nemenman
Journal:  Curr Opin Biotechnol       Date:  2014-06-09       Impact factor: 9.740

6.  A model for the generation and transmission of variations in evolution.

Authors:  Olivier Rivoire; Stanislas Leibler
Journal:  Proc Natl Acad Sci U S A       Date:  2014-04-24       Impact factor: 11.205

Review 7.  Selforganization of matter and the evolution of biological macromolecules.

Authors:  M Eigen
Journal:  Naturwissenschaften       Date:  1971-10
  7 in total

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