Literature DB >> 28796617

Segmentation of 3-D High-Frequency Ultrasound Images of Human Lymph Nodes Using Graph Cut With Energy Functional Adapted to Local Intensity Distribution.

Jen-Wei Kuo, Jonathan Mamou, Yao Wang, Emi Saegusa-Beecroft, Junji Machi, Ernest J Feleppa.   

Abstract

Previous studies by our group have shown that 3-D high-frequency quantitative ultrasound (QUS) methods have the potential to differentiate metastatic lymph nodes (LNs) from cancer-free LNs dissected from human cancer patients. To successfully perform these methods inside the LN parenchyma (LNP), an automatic segmentation method is highly desired to exclude the surrounding thin layer of fat from QUS processing and accurately correct for ultrasound attenuation. In high-frequency ultrasound images of LNs, the intensity distribution of LNP and fat varies spatially because of acoustic attenuation and focusing effects. Thus, the intensity contrast between two object regions (e.g., LNP and fat) is also spatially varying. In our previous work, nested graph cut (GC) demonstrated its ability to simultaneously segment LNP, fat, and the outer phosphate-buffered saline bath even when some boundaries are lost because of acoustic attenuation and focusing effects. This paper describes a novel approach called GC with locally adaptive energy to further deal with spatially varying distributions of LNP and fat caused by inhomogeneous acoustic attenuation. The proposed method achieved Dice similarity coefficients of 0.937±0.035 when compared with expert manual segmentation on a representative data set consisting of 115 3-D LN images obtained from colorectal cancer patients.

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Mesh:

Year:  2017        PMID: 28796617      PMCID: PMC5913754          DOI: 10.1109/TUFFC.2017.2737948

Source DB:  PubMed          Journal:  IEEE Trans Ultrason Ferroelectr Freq Control        ISSN: 0885-3010            Impact factor:   2.725


  9 in total

1.  What energy functions can be minimized via graph cuts?

Authors:  Vladimir Kolmogorov; Ramin Zabih
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2004-02       Impact factor: 6.226

2.  A robust graph-based segmentation method for breast tumors in ultrasound images.

Authors:  Qing-Hua Huang; Su-Ying Lee; Long-Zhong Liu; Min-Hua Lu; Lian-Wen Jin; An-Hua Li
Journal:  Ultrasonics       Date:  2011-08-25       Impact factor: 2.890

3.  Local optimization based segmentation of spatially-recurring, multi-region objects with part configuration constraints.

Authors:  Masoud S Nosrati; Ghassan Hamarneh
Journal:  IEEE Trans Med Imaging       Date:  2014-05-12       Impact factor: 10.048

4.  Nested Graph Cut for Automatic Segmentation of High-Frequency Ultrasound Images of the Mouse Embryo.

Authors:  Jen-wei Kuo; Jonathan Mamou; Orlando Aristizábal; Xuan Zhao; Jeffrey A Ketterling; Yao Wang
Journal:  IEEE Trans Med Imaging       Date:  2015-09-09       Impact factor: 10.048

5.  Three-dimensional high-frequency backscatter and envelope quantification of cancerous human lymph nodes.

Authors:  Jonathan Mamou; Alain Coron; Michael L Oelze; Emi Saegusa-Beecroft; Masaki Hata; Paul Lee; Junji Machi; Eugene Yanagihara; Pascal Laugier; Ernest J Feleppa
Journal:  Ultrasound Med Biol       Date:  2011-03       Impact factor: 2.998

6.  Local Transverse-Slice-Based Level-Set Method for Segmentation of 3-D High-Frequency Ultrasonic Backscatter From Dissected Human Lymph Nodes.

Authors:  Alain Coron; Jonathan Mamou; Emi Saegusa-Beecroft; Tadashi Yamaguchi; Eugene Yanagihara; Junji Machi; S Lori Bridal; Ernest Joseph Feleppa
Journal:  IEEE Trans Biomed Eng       Date:  2016-09-28       Impact factor: 4.538

7.  Three-dimensional high-frequency characterization of cancerous lymph nodes.

Authors:  Jonathan Mamou; Alain Coron; Masaki Hata; Junji Machi; Eugene Yanagihara; Pascal Laugier; Ernest J Feleppa
Journal:  Ultrasound Med Biol       Date:  2010-02-04       Impact factor: 2.998

8.  Three-dimensional quantitative ultrasound for detecting lymph node metastases.

Authors:  Emi Saegusa-Beecroft; Junji Machi; Jonathan Mamou; Masaki Hata; Alain Coron; Eugene T Yanagihara; Tadashi Yamaguchi; Michael L Oelze; Pascal Laugier; Ernest J Feleppa
Journal:  J Surg Res       Date:  2013-01-08       Impact factor: 2.192

Review 9.  Lymph node staging in colorectal cancer: old controversies and recent advances.

Authors:  Annika Resch; Cord Langner
Journal:  World J Gastroenterol       Date:  2013-12-14       Impact factor: 5.742

  9 in total
  1 in total

1.  Identification of spatially variable genes with graph cuts.

Authors:  Ke Zhang; Wanwan Feng; Peng Wang
Journal:  Nat Commun       Date:  2022-09-19       Impact factor: 17.694

  1 in total

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