Literature DB >> 28793213

Critical Influence of Cosolutes and Surfaces on the Assembly of Serpin-Derived Amyloid Fibrils.

Michael W Risør1, Dennis W Juhl2, Morten Bjerring2, Joachim Mathiesen3, Jan J Enghild4, Niels C Nielsen2, Daniel E Otzen5.   

Abstract

Many proteins and peptides self-associate into highly ordered and structurally similar amyloid cross-β aggregates. This fibrillation is critically dependent on properties of the protein and the surrounding environment that alter kinetic and thermodynamic equilibria. Here, we report on dominating surface and solution effects on the fibrillogenic behavior and amyloid assembly of the C-36 peptide, a circulating bioactive peptide from the α1-antitrypsin serine protease inhibitor. C-36 converts from an unstructured peptide to mature amyloid twisted-ribbon fibrils over a few hours when incubated on polystyrene plates under physiological conditions through a pathway dominated by surface-enhanced nucleation. In contrast, in plates with nonbinding surfaces, slow bulk nucleation takes precedence over surface catalysis and leads to fibrillar polymorphism. Fibrillation is strongly ion-sensitive, underlining the interplay between hydrophilic and hydrophobic forces in molecular self-assembly. The addition of exogenous surfaces in the form of silica glass beads and polyanionic heparin molecules potently seeds the amyloid conversion process. In particular, heparin acts as an interacting template that rapidly forces β-sheet aggregation of C-36 to distinct amyloid species within minutes and leads to a more homogeneous fibril population according to solid-state NMR analysis. Heparin's template effect highlights its role in amyloid seeding and homogeneous self-assembly, which applies both in vitro and in vivo, where glycosaminoglycans are strongly associated with amyloid deposits. Our study illustrates the versatile thermodynamic landscape of amyloid formation and highlights how different experimental conditions direct C-36 into distinct macromolecular structures.
Copyright © 2017 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2017        PMID: 28793213      PMCID: PMC5549687          DOI: 10.1016/j.bpj.2017.06.030

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  131 in total

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Authors:  Richard W McLaughlin; Janelle K De Stigter; Laura A Sikkink; Elizabeth M Baden; Marina Ramirez-Alvarado
Journal:  Protein Sci       Date:  2006-06-02       Impact factor: 6.725

2.  The core of Ure2p prion fibrils is formed by the N-terminal segment in a parallel cross-β structure: evidence from solid-state NMR.

Authors:  Dmitry S Kryndushkin; Reed B Wickner; Robert Tycko
Journal:  J Mol Biol       Date:  2011-04-08       Impact factor: 5.469

3.  An analytical solution to the kinetics of breakable filament assembly.

Authors:  Tuomas P J Knowles; Christopher A Waudby; Glyn L Devlin; Samuel I A Cohen; Adriano Aguzzi; Michele Vendruscolo; Eugene M Terentjev; Mark E Welland; Christopher M Dobson
Journal:  Science       Date:  2009-12-11       Impact factor: 47.728

4.  Optimized co-solute paramagnetic relaxation enhancement for the rapid NMR analysis of a highly fibrillogenic peptide.

Authors:  Nur Alia Oktaviani; Michael W Risør; Young-Ho Lee; Rik P Megens; Djurre H de Jong; Renee Otten; Ruud M Scheek; Jan J Enghild; Niels Chr Nielsen; Takahisa Ikegami; Frans A A Mulder
Journal:  J Biomol NMR       Date:  2015-03-28       Impact factor: 2.835

5.  On the Hofmeister effect: fluctuations at the protein-water interface and the surface tension.

Authors:  Ferenc Bogár; Ferenc Bartha; Zoltán Násztor; László Fábián; Balázs Leitgeb; András Dér
Journal:  J Phys Chem B       Date:  2014-07-10       Impact factor: 2.991

6.  Electrodynamics of lipid membrane interactions in the presence of zwitterionic buffers.

Authors:  Megan M Koerner; Luis A Palacio; Johnnie W Wright; Kelly S Schweitzer; Bruce D Ray; Horia I Petrache
Journal:  Biophys J       Date:  2011-07-20       Impact factor: 4.033

7.  Accelerated alpha-synuclein fibrillation in crowded milieu.

Authors:  Vladimir N Uversky; Elisa M Cooper; Kiowa S Bower; Jie Li; Anthony L Fink
Journal:  FEBS Lett       Date:  2002-03-27       Impact factor: 4.124

8.  The "CPC clip motif": a conserved structural signature for heparin-binding proteins.

Authors:  Marc Torrent; M Victòria Nogués; David Andreu; Ester Boix
Journal:  PLoS One       Date:  2012-08-06       Impact factor: 3.240

9.  A generic mechanism of emergence of amyloid protofilaments from disordered oligomeric aggregates.

Authors:  Stefan Auer; Filip Meersman; Christopher M Dobson; Michele Vendruscolo
Journal:  PLoS Comput Biol       Date:  2008-11-14       Impact factor: 4.475

10.  Nucleation of protein fibrillation by nanoparticles.

Authors:  Sara Linse; Celia Cabaleiro-Lago; Wei-Feng Xue; Iseult Lynch; Stina Lindman; Eva Thulin; Sheena E Radford; Kenneth A Dawson
Journal:  Proc Natl Acad Sci U S A       Date:  2007-05-07       Impact factor: 11.205

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  8 in total

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Authors:  Germán Rivas; Allen P Minton
Journal:  Biophys Rev       Date:  2017-12-12

2.  Mechanism of Fibril and Soluble Oligomer Formation in Amyloid Beta and Hen Egg White Lysozyme Proteins.

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Journal:  J Phys Chem B       Date:  2019-06-27       Impact factor: 2.991

3.  Conservation of the Amyloid Interactome Across Diverse Fibrillar Structures.

Authors:  Dennis Wilkens Juhl; Michael Wulff Risør; Carsten Scavenius; Casper Bøjer Rasmussen; Daniel Otzen; Niels Chr Nielsen; Jan J Enghild
Journal:  Sci Rep       Date:  2019-03-07       Impact factor: 4.379

4.  Alpha 1 Antitrypsin is an Inhibitor of the SARS-CoV-2-Priming Protease TMPRSS2.

Authors:  Nurit P Azouz; Andrea M Klingler; Victoria Callahan; Ivan V Akhrymuk; Katarina Elez; Lluís Raich; Brandon M Henry; Justin L Benoit; Stefanie W Benoit; Frank Noé; Kylene Kehn-Hall; Marc E Rothenberg
Journal:  Pathog Immun       Date:  2021-04-26

5.  The Environment Is a Key Factor in Determining the Anti-Amyloid Efficacy of EGCG.

Authors:  Tomas Sneideris; Andrius Sakalauskas; Rebecca Sternke-Hoffmann; Alessia Peduzzo; Mantas Ziaunys; Alexander K Buell; Vytautas Smirnovas
Journal:  Biomolecules       Date:  2019-12-11

6.  The Reversible Non-covalent Aggregation Into Fibers of PGLa and Magainin 2 Preserves Their Antimicrobial Activity and Synergism.

Authors:  Dennis Wilkens Juhl; Elise Glattard; Morane Lointier; Panos Bampilis; Burkhard Bechinger
Journal:  Front Cell Infect Microbiol       Date:  2020-09-30       Impact factor: 5.293

7.  Alpha 1 Antitrypsin is an Inhibitor of the SARS-CoV-2-Priming Protease TMPRSS2.

Authors:  Nurit P Azouz; Andrea M Klingler; Victoria Callahan; Ivan V Akhrymuk; Katarina Elez; Lluís Raich; Brandon M Henry; Justin L Benoit; Stefanie W Benoit; Frank Noé; Kylene Kehn-Hall; Marc E Rothenberg
Journal:  bioRxiv       Date:  2020-10-07

8.  Effect of 1-Ethyl-3-methylimidazolium Tetrafluoroborate and Acetate Ionic Liquids on Stability and Amyloid Aggregation of Lysozyme.

Authors:  Diana Fedunova; Andrea Antosova; Jozef Marek; Vladimir Vanik; Erna Demjen; Zuzana Bednarikova; Zuzana Gazova
Journal:  Int J Mol Sci       Date:  2022-01-11       Impact factor: 5.923

  8 in total

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