| Literature DB >> 28790400 |
Saadat Kamran1,2, Naveed Akhtar3,4, Ayman Alboudi5, Kainat Kamran6, Arsalan Ahmad7, Jihad Inshasi5, Abdul Salam3, Ashfaq Shuaib3,8, Uvais Qidwai9.
Abstract
The prediction of infarction volume after stroke onset depends on the shape of the growth dynamics of the infarction. To understand growth patterns that predict lesion volume changes, we studied currently available models described in literature and compared the models with Adaptive Neuro-Fuzzy Inference System [ANFIS], a method previously unused in the prediction of infarction growth and infarction volume (IV). We included 67 patients with malignant middle cerebral artery [MMCA] stroke who underwent decompressive hemicraniectomy. All patients had at least three cranial CT scans prior to the surgery. The rate of growth and volume of infarction measured on the third CT was predicted with ANFIS without statistically significant difference compared to the ground truth [P = 0.489]. This was not possible with linear, logarithmic or exponential methods. ANFIS was able to predict infarction volume [IV3] over a wide range of volume [163.7-600 cm3] and time [22-110 hours]. The cross correlation [CRR] indicated similarity between the ANFIS-predicted IV3 and original data of 82% for ANFIS, followed by logarithmic 70%, exponential 63% and linear 48% respectively. Our study shows that ANFIS is superior to previously defined methods in the prediction of infarction growth rate (IGR) with reasonable accuracy, over wide time and volume range.Entities:
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Year: 2017 PMID: 28790400 PMCID: PMC5548812 DOI: 10.1038/s41598-017-08044-4
Source DB: PubMed Journal: Sci Rep ISSN: 2045-2322 Impact factor: 4.379
Data used for training ANFIS and testing for all methods used.
| Training data n = 41 | Test data n = 26 | P value | |
|---|---|---|---|
| Age | 50.95 ± 13.11 | 56.19 ± 12.023 | 0.105 |
| Gender | 34[82.9%] | 24[92.3%] | 0.465 |
| Diabetes | 12[29.3%] | 9[34.6%] | 0.646 |
| Hypertension | 22[53.7%] | 19[73.1%] | 0.112 |
| Dyslipidemia | 12[29.35] | 12[46.2%] | 0.160 |
| Coronary artery disease | 7[17.1%] | 5[19.2%] | 0.822 |
| Congestive Heart Failure | 4[9.8%] | 2[7.7%] | 0.773 |
| Infarct Volume 1st CT cm3 | 73.26 ± 76.30 | 75.08 ± 58.67 | 0.291 |
| Infarct Volume 2nd CT cm3 | 250.94 ± 114.55 | 218.62 ± 79.36 | 0.020 |
| Infarct Volume 3rd CT cm3 | 352.65 ± 108.18 | — | |
| Time 1st CT hours | 6.39 ± 6.76 | 5.15 ± 5.77 | 0.569 |
| Time 2nd CT hours | 37.26 ± 24.48 | 28.27 ± 29.97 | 0.615 |
| Time 3rd CT hours | 74.11 ± 54.37 | 64.24 ± 68.01 | 0.947 |
| 1st IGR ml/hr | 5.61 ± 3.07 | 6.74 ± 3.61 | 0.428 |
| 2nd IGR ml/hr | 8.33 ± 6.75 | 9.46 ± 7.94 | 0.888 |
| 3rd IGR ml/hr | 4.94 ± 7.15 | — |
Values are mean with percentage, mean age with standard deviation.
Individual patient data of third infarct volume, original and predicted by various methods at time of CT3, CORR Cross correlation, and high order variability of predicted values by various methods used for IV3 prediction.
| Age | Risk Factor | Vessel Occlusion | Original volume | ANFIS | Linear Model | Logarithmic Model | Exponential Model | Time to CT3 |
|---|---|---|---|---|---|---|---|---|
| 66 | DM, CAD | MCA | 326.32 | 307.32 | 126.19 | 272.7 | 82.15 | 21.3 |
| 38 | HTN | MCA | 348.82 | 407.58 | 205.59 | 334.54 | 236.17 | 48.3 |
| 53 | HTN, DyL | ICA, MCA, ACA | 650 | 600.84 | 506.22 | 445.11 | 360.03 | 64.3 |
| 74 | HTN | ICA, MCA, ACA | 306.2 | 267.07 | 107.35 | 209.95 | 192.48 | 73.5 |
| 48 | HTN, DyL, CAD | ICA, MCA, ACA | 194.7 | 213.98 | 49.57 | 124.43 | 23.34 | 26.3 |
| 54 | HTN | ICA, MCA, ACA | 374.72 | 364.5 | 351.02 | 297.75 | 234.02 | 65.5 |
| 65 | DM, HTN, DyL, CAD | ICA, MCA, ACA | 272.4 | 249.16 | 123.23 | 265.25 | 59.31 | 56.3 |
| 52 | HTN, DM, DyL, CAD, CHF | MCA | 288.92 | 172.52 | 146.65 | 197.32 | 190.42 | 373.15 |
| 69 | HTN, DM, DyL | MCA | 390.48 | 327.67 | 163.19 | 242.27 | 196.09 | 49 |
| 54 | HTN, DyL | MCA | 336 | 372.48 | 531.1 | 266.35 | 235.62 | 110 |
| 82 | HTN | ICA, MCA, ACA | 135 | 163.7 | 305.96 | 120.35 | 56.9 | 50.5 |
| 52 | DM, HTN, DyL | ICA, MCA, ACA | 281.11 | 295.89 | 309.57 | 246.23 | 206.05 | 81.4 |
| 50 | DM, DyL | MCA | 406.38 | 352.34 | 252.12 | 274.78 | 123.86 | 37 |
| 60 | DM, HTN | MCA | 321.21 | 352.98 | 348.33 | 387.2 | 73.91 | 22 |
| 54 | HTN | ICA, MCA, ACA | 374.6 | 359.26 | 134.17 | 227.37 | 173.83 | 48.3 |
| 41 | DyL | ICA, MCA, ACA | 437.5 | 465.99 | 163.76 | 396.31 | 229.25 | 49.3 |
| 67 | CHF | MCA | 279.22 | 348.29 | 386.31 | 303.61 | 182.61 | 49 |
| 34 | None | MCA | 387.53 | 365.76 | 181.65 | 330.65 | 266.04 | 73 |
| 53 | HTN, DyL | MCA | 281.4 | 313.21 | 215.17 | 248.03 | 124.74 | 35.3 |
| 60 | DM, HTN | MCA | 479 | 268.16 | 663 | 236.89 | 35.04 | 32.4 |
| 35 | None | ICA, MCA, ACA | 217.44 | 266.79 | 198.55 | 262.16 | 132.69 | 42.36 |
| 51 | DM, DyL | MCA | 131.8 | 167.91 | 84.61 | 69.47 | 26.06 | 32.45 |
| 60 | HTN, CAD | MCA | 492.34 | 368.07 | 284.84 | 226.06 | 206.55 | 125 |
| 35 | HTN | MCA | 326.6 | 361.09 | 428.09 | 287.98 | 206.48 | 60.05 |
| 61 | DM, HTN, DyL | MCA | 220 | 244.11 | 68.78 | 121.23 | 102.56 | 53.4 |
| 60 | HTN | ICA, MCA, ACA | 372.6 | 318.78 | 211.04 | 357.78 | 146.5 | 29.35 |
| P Value | 1.00 | 0.32 | 0.01 | 0.00 | 0.00 | |||
| Skewness | 0.57 | 0.69 | 0.96 | −0.13 | 0.13 | |||
| Kurtosis | 4.03 | 4.49 | 3.32 | 2.92 | 2.60 | |||
| CORR | 1.00 | 0.82 | 0.48 | 0.70 | 0.63 |
Infarct volume is in cm3, Time CT3 in hours. DM-diabetes mellitus, HTN-hypertension, DyL-dyslipidemia, CAD-coronary artery disease, CHF-congestive heart failure, ICA-internal carotid artery, MCA-middle cerebral artery, ACA-anterior cerebral artery.
Figure 1Comparison of mean squared of prediction error showing less errors by ANFIS compared to other prediction methods.
Figure 2Typical constrained data set with dynamic values.
Figure 3ANFIS structure and functioning explanation, superimposed on neurons to show the similarity between ANFIS and neuronal network structure and function.
Figure 4Final decision surface built by covering all the implications of the input data space. (a) 3D surface view, and (b) View from top [contour view]. X-axis represents IGR1 input; Y-axis IGR2 input while the output IGR3 is shown on the z-axis based on the above rules.