Literature DB >> 28790186

Beyond icosahedral symmetry in packings of proteins in spherical shells.

Majid Mosayebi1,2, Deborah K Shoemark2,3, Jordan M Fletcher4, Richard B Sessions2,3, Noah Linden1, Derek N Woolfson5,3,4, Tanniemola B Liverpool1,2.   

Abstract

The formation of quasi-spherical cages from protein building blocks is a remarkable self-assembly process in many natural systems, where a small number of elementary building blocks are assembled to build a highly symmetric icosahedral cage. In turn, this has inspired synthetic biologists to design de novo protein cages. We use simple models, on multiple scales, to investigate the self-assembly of a spherical cage, focusing on the regularity of the packing of protein-like objects on the surface. Using building blocks, which are able to pack with icosahedral symmetry, we examine how stable these highly symmetric structures are to perturbations that may arise from the interplay between flexibility of the interacting blocks and entropic effects. We find that, in the presence of those perturbations, icosahedral packing is not the most stable arrangement for a wide range of parameters; rather disordered structures are found to be the most stable. Our results suggest that (i) many designed, or even natural, protein cages may not be regular in the presence of those perturbations and (ii) optimizing those flexibilities can be a possible design strategy to obtain regular synthetic cages with full control over their surface properties.

Entities:  

Keywords:  coarse-grained modeling; icosahedral symmetry; protein cage; protein design; self-assembly

Mesh:

Substances:

Year:  2017        PMID: 28790186      PMCID: PMC5576817          DOI: 10.1073/pnas.1706825114

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  44 in total

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Journal:  Nat Rev Mol Cell Biol       Date:  2006-01       Impact factor: 94.444

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Authors:  Sharon C Glotzer; Michael J Solomon
Journal:  Nat Mater       Date:  2007-08       Impact factor: 43.841

6.  Simulation studies of the self-assembly of cone-shaped particles.

Authors:  Ting Chen; Zhenli Zhang; Sharon C Glotzer
Journal:  Langmuir       Date:  2007-05-10       Impact factor: 3.882

7.  Elastic instability of a crystal growing on a curved surface.

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8.  Self-assembling cages from coiled-coil peptide modules.

Authors:  Jordan M Fletcher; Robert L Harniman; Frederick R H Barnes; Aimee L Boyle; Andrew Collins; Judith Mantell; Thomas H Sharp; Massimo Antognozzi; Paula J Booth; Noah Linden; Mervyn J Miles; Richard B Sessions; Paul Verkade; Derek N Woolfson
Journal:  Science       Date:  2013-04-11       Impact factor: 47.728

Review 9.  Self-assembling, protein-based intracellular bacterial organelles: emerging vehicles for encapsulating, targeting and delivering therapeutical cargoes.

Authors:  José L Corchero; Juan Cedano
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Authors:  Yang Hsia; Jacob B Bale; Shane Gonen; Dan Shi; William Sheffler; Kimberly K Fong; Una Nattermann; Chunfu Xu; Po-Ssu Huang; Rashmi Ravichandran; Sue Yi; Trisha N Davis; Tamir Gonen; Neil P King; David Baker
Journal:  Nature       Date:  2016-06-15       Impact factor: 49.962

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  9 in total

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7.  Anticancer Activity of Reconstituted Ribonuclease S-Decorated Artificial Viral Capsid.

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Review 8.  Connectability of protein cages.

Authors:  Karolina Majsterkiewicz; Yusuke Azuma; Jonathan G Heddle
Journal:  Nanoscale Adv       Date:  2020-05-18

9.  Bioinspired Silicification Reveals Structural Detail in Self-Assembled Peptide Cages.

Authors:  Johanna M Galloway; Laura Senior; Jordan M Fletcher; Joseph L Beesley; Lorna R Hodgson; Robert L Harniman; Judith M Mantell; Jennifer Coombs; Guto G Rhys; Wei-Feng Xue; Majid Mosayebi; Noah Linden; Tanniemola B Liverpool; Paul Curnow; Paul Verkade; Derek N Woolfson
Journal:  ACS Nano       Date:  2018-01-22       Impact factor: 15.881

  9 in total

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