Literature DB >> 28786556

INSIDIA: A FIJI Macro Delivering High-Throughput and High-Content Spheroid Invasion Analysis.

Chiara Moriconi1, Valentina Palmieri2,3, Riccardo Di Santo2, Giusy Tornillo4, Massimiliano Papi2,3, Geoff Pilkington5, Marco De Spirito2, Mark Gumbleton1.   

Abstract

Time-series image capture of in vitro 3D spheroidal cancer models embedded within an extracellular matrix affords examination of spheroid growth and cancer cell invasion. However, a customizable, comprehensive and open source solution for the quantitative analysis of such spheroid images is lacking. Here, the authors describe INSIDIA (INvasion SpheroID ImageJ Analysis), an open-source macro implemented as a customizable software algorithm running on the FIJI platform, that enables high-throughput high-content quantitative analysis of spheroid images (both bright-field gray and fluorescent images) with the output of a range of parameters defining the spheroid "tumor" core and its invasive characteristics.
© 2017 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  FIJI; analysis; core; invasion; quantitation; spheroid

Mesh:

Substances:

Year:  2017        PMID: 28786556     DOI: 10.1002/biot.201700140

Source DB:  PubMed          Journal:  Biotechnol J        ISSN: 1860-6768            Impact factor:   4.677


  10 in total

1.  The importance of scoring recognition fitness in spheroid morphological analysis for robust label-free quality evaluation.

Authors:  Kazuhide Shirai; Hirohito Kato; Yuta Imai; Mayu Shibuta; Kei Kanie; Ryuji Kato
Journal:  Regen Ther       Date:  2020-05-14       Impact factor: 3.419

2.  Concentration-Dependent Pro- and Antitumor Activities of Quercetin in Human Melanoma Spheroids: Comparative Analysis of 2D and 3D Cell Culture Models.

Authors:  Harald Hundsberger; Anna Stierschneider; Victoria Sarne; Doris Ripper; Jasmin Schimon; Hans Peter Weitzenböck; Dominik Schild; Nico Jacobi; Andreas Eger; Josef Atzler; Christian T Klein; Christoph Wiesner
Journal:  Molecules       Date:  2021-01-30       Impact factor: 4.411

3.  Biobanked Glioblastoma Patient-Derived Organoids as a Precision Medicine Model to Study Inhibition of Invasion.

Authors:  Emilie Darrigues; Edward H Zhao; Annick De Loose; Madison P Lee; Michael J Borrelli; Robert L Eoff; Deni S Galileo; Narsimha R Penthala; Peter A Crooks; Analiz Rodriguez
Journal:  Int J Mol Sci       Date:  2021-10-03       Impact factor: 5.923

4.  Upregulation of Cathepsin X in Glioblastoma: Interplay with γ-Enolase and the Effects of Selective Cathepsin X Inhibitors.

Authors:  Bernarda Majc; Anamarija Habič; Metka Novak; Ana Rotter; Andrej Porčnik; Jernej Mlakar; Vera Župunski; Urša Pečar Fonović; Damijan Knez; Nace Zidar; Stanislav Gobec; Janko Kos; Tamara Lah Turnšek; Anja Pišlar; Barbara Breznik
Journal:  Int J Mol Sci       Date:  2022-02-04       Impact factor: 5.923

5.  Ex vivo propagation in a novel 3D high-throughput co-culture system for multiple myeloma.

Authors:  Johannes M Waldschmidt; Stefan J Fruttiger; Dagmar Wider; Johannes Jung; Andreas R Thomsen; Tanja N Hartmann; Justus Duyster; Martin J Hug; Kareem A Azab; Manfred Jung; Ralph Wäsch; Monika Engelhardt
Journal:  J Cancer Res Clin Oncol       Date:  2022-01-24       Impact factor: 4.322

6.  Iron and copper complexes with antioxidant activity as inhibitors of the metastatic potential of glioma cells.

Authors:  Joana F Guerreiro; Marco Antônio G B Gomes; Francesca Pagliari; Jeannette Jansen; Maria G Marafioti; Clelia Nistico; Rachel Hanley; Rafael O Costa; Sarah S Ferreira; Filipa Mendes; Christiane Fernandes; Adolfo Horn; Luca Tirinato; Joao Seco
Journal:  RSC Adv       Date:  2020-03-30       Impact factor: 4.036

7.  Integrating in vitro experiments with in silico approaches for Glioblastoma invasion: the role of cell-to-cell adhesion heterogeneity.

Authors:  M-E Oraiopoulou; E Tzamali; G Tzedakis; E Liapis; G Zacharakis; A Vakis; J Papamatheakis; V Sakkalis
Journal:  Sci Rep       Date:  2018-11-01       Impact factor: 4.379

8.  Graphene Quantum Dots' Surface Chemistry Modulates the Sensitivity of Glioblastoma Cells to Chemotherapeutics.

Authors:  Giordano Perini; Valentina Palmieri; Gabriele Ciasca; Marcello D'Ascenzo; Jacopo Gervasoni; Aniello Primiano; Monica Rinaldi; Daniela Fioretti; Chiara Prampolini; Federica Tiberio; Wanda Lattanzi; Ornella Parolini; Marco De Spirito; Massimiliano Papi
Journal:  Int J Mol Sci       Date:  2020-08-31       Impact factor: 5.923

9.  Inhibiting the Growth of 3D Brain Cancer Models with Bio-Coronated Liposomal Temozolomide.

Authors:  Giordano Perini; Francesca Giulimondi; Valentina Palmieri; Alberto Augello; Luca Digiacomo; Erica Quagliarini; Daniela Pozzi; Massimiliano Papi; Giulio Caracciolo
Journal:  Pharmaceutics       Date:  2021-03-12       Impact factor: 6.321

10.  INSIDIA 2.0 High-Throughput Analysis of 3D Cancer Models: Multiparametric Quantification of Graphene Quantum Dots Photothermal Therapy for Glioblastoma and Pancreatic Cancer.

Authors:  Giordano Perini; Enrico Rosa; Ginevra Friggeri; Lorena Di Pietro; Marta Barba; Ornella Parolini; Gabriele Ciasca; Chiara Moriconi; Massimiliano Papi; Marco De Spirito; Valentina Palmieri
Journal:  Int J Mol Sci       Date:  2022-03-16       Impact factor: 5.923

  10 in total

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