Literature DB >> 28784790

Ancient DNA reveals the Arctic origin of Viking Age cod from Haithabu, Germany.

Bastiaan Star1, Sanne Boessenkool2, Agata T Gondek2, Elena A Nikulina3, Anne Karin Hufthammer4, Christophe Pampoulie5, Halvor Knutsen2,6,7, Carl André8, Heidi M Nistelberger2, Jan Dierking9, Christoph Petereit9, Dirk Heinrich10, Kjetill S Jakobsen2, Nils Chr Stenseth1,7, Sissel Jentoft2,7, James H Barrett11.   

Abstract

Knowledge of the range and chronology of historic trade and long-distance transport of natural resources is essential for determining the impacts of past human activities on marine environments. However, the specific biological sources of imported fauna are often difficult to identify, in particular if species have a wide spatial distribution and lack clear osteological or isotopic differentiation between populations. Here, we report that ancient fish-bone remains, despite being porous, brittle, and light, provide an excellent source of endogenous DNA (15-46%) of sufficient quality for whole-genome reconstruction. By comparing ancient sequence data to that of modern specimens, we determine the biological origin of 15 Viking Age (800-1066 CE) and subsequent medieval (1066-1280 CE) Atlantic cod (Gadus morhua) specimens from excavation sites in Germany, Norway, and the United Kingdom. Archaeological context indicates that one of these sites was a fishing settlement for the procurement of local catches, whereas the other localities were centers of trade. Fish from the trade sites show a mixed ancestry and are statistically differentiated from local fish populations. Moreover, Viking Age samples from Haithabu, Germany, are traced back to the North East Arctic Atlantic cod population that has supported the Lofoten fisheries of Norway for centuries. Our results resolve a long-standing controversial hypothesis and indicate that the marine resources of the North Atlantic Ocean were used to sustain an international demand for protein as far back as the Viking Age.

Entities:  

Keywords:  chromosomal inversion; fish bone; genomics; high-throughput sequencing; trade

Mesh:

Substances:

Year:  2017        PMID: 28784790      PMCID: PMC5576834          DOI: 10.1073/pnas.1710186114

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  58 in total

Review 1.  Historical overfishing and the recent collapse of coastal ecosystems.

Authors:  J B Jackson; M X Kirby; W H Berger; K A Bjorndal; L W Botsford; B J Bourque; R H Bradbury; R Cooke; J Erlandson; J A Estes; T P Hughes; S Kidwell; C B Lange; H S Lenihan; J M Pandolfi; C H Peterson; R S Steneck; M J Tegner; R R Warner
Journal:  Science       Date:  2001-07-27       Impact factor: 47.728

2.  Illumina sequencing library preparation for highly multiplexed target capture and sequencing.

Authors:  Matthias Meyer; Martin Kircher
Journal:  Cold Spring Harb Protoc       Date:  2010-06

3.  The genome sequence of Atlantic cod reveals a unique immune system.

Authors:  Bastiaan Star; Alexander J Nederbragt; Sissel Jentoft; Unni Grimholt; Martin Malmstrøm; Tone F Gregers; Trine B Rounge; Jonas Paulsen; Monica H Solbakken; Animesh Sharma; Ola F Wetten; Anders Lanzén; Roger Winer; James Knight; Jan-Hinnerk Vogel; Bronwen Aken; Oivind Andersen; Karin Lagesen; Ave Tooming-Klunderud; Rolf B Edvardsen; Kirubakaran G Tina; Mari Espelund; Chirag Nepal; Christopher Previti; Bård Ove Karlsen; Truls Moum; Morten Skage; Paul R Berg; Tor Gjøen; Heiner Kuhl; Jim Thorsen; Ketil Malde; Richard Reinhardt; Lei Du; Steinar D Johansen; Steve Searle; Sigbjørn Lien; Frank Nilsen; Inge Jonassen; Stig W Omholt; Nils Chr Stenseth; Kjetill S Jakobsen
Journal:  Nature       Date:  2011-08-10       Impact factor: 49.962

4.  Genome-wide ancestry of 17th-century enslaved Africans from the Caribbean.

Authors:  Hannes Schroeder; María C Ávila-Arcos; Anna-Sapfo Malaspinas; G David Poznik; Marcela Sandoval-Velasco; Meredith L Carpenter; José Víctor Moreno-Mayar; Martin Sikora; Philip L F Johnson; Morten Erik Allentoft; José Alfredo Samaniego; Jay B Haviser; Michael W Dee; Thomas W Stafford; Antonio Salas; Ludovic Orlando; Eske Willerslev; Carlos D Bustamante; M Thomas P Gilbert
Journal:  Proc Natl Acad Sci U S A       Date:  2015-03-09       Impact factor: 11.205

5.  Chromosomal inversion polymorphisms and adaptation.

Authors:  Ary A Hoffmann; Carla M Sgrò; Andrew R Weeks
Journal:  Trends Ecol Evol       Date:  2004-09       Impact factor: 17.712

6.  mapDamage2.0: fast approximate Bayesian estimates of ancient DNA damage parameters.

Authors:  Hákon Jónsson; Aurélien Ginolhac; Mikkel Schubert; Philip L F Johnson; Ludovic Orlando
Journal:  Bioinformatics       Date:  2013-04-23       Impact factor: 6.937

7.  Population structure and eigenanalysis.

Authors:  Nick Patterson; Alkes L Price; David Reich
Journal:  PLoS Genet       Date:  2006-12       Impact factor: 5.917

8.  Optimal Ancient DNA Yields from the Inner Ear Part of the Human Petrous Bone.

Authors:  Ron Pinhasi; Daniel Fernandes; Kendra Sirak; Mario Novak; Sarah Connell; Songül Alpaslan-Roodenberg; Fokke Gerritsen; Vyacheslav Moiseyev; Andrey Gromov; Pál Raczky; Alexandra Anders; Michael Pietrusewsky; Gary Rollefson; Marija Jovanovic; Hiep Trinhhoang; Guy Bar-Oz; Marc Oxenham; Hirofumi Matsumura; Michael Hofreiter
Journal:  PLoS One       Date:  2015-06-18       Impact factor: 3.240

9.  Three chromosomal rearrangements promote genomic divergence between migratory and stationary ecotypes of Atlantic cod.

Authors:  Paul R Berg; Bastiaan Star; Christophe Pampoulie; Marte Sodeland; Julia M I Barth; Halvor Knutsen; Kjetill S Jakobsen; Sissel Jentoft
Journal:  Sci Rep       Date:  2016-03-17       Impact factor: 4.379

10.  High potential for using DNA from ancient herring bones to inform modern fisheries management and conservation.

Authors:  Camilla F Speller; Lorenz Hauser; Dana Lepofsky; Jason Moore; Antonia T Rodrigues; Madonna L Moss; Iain McKechnie; Dongya Y Yang
Journal:  PLoS One       Date:  2012-11-30       Impact factor: 3.240

View more
  9 in total

1.  Possible adverse impact of contaminants on Atlantic cod population dynamics in coastal ecosystems.

Authors:  Kotaro Ono; Halvor Knutsen; Esben M Olsen; Anders Ruus; Dag Ø Hjermann; Nils Chr Stenseth
Journal:  Proc Biol Sci       Date:  2019-07-31       Impact factor: 5.349

2.  Tooth oxygen isotopes reveal Late Bronze Age origin of Mediterranean fish aquaculture and trade.

Authors:  Sisma-Ventura Guy; Tütken Thomas; Zohar Irit; Pack Andreas; Sivan Dorit; Lernau Omri; Gilboa Ayelet; Bar-Oz Guy
Journal:  Sci Rep       Date:  2018-09-20       Impact factor: 4.379

3.  Disentangling structural genomic and behavioural barriers in a sea of connectivity.

Authors:  Julia M I Barth; David Villegas-Ríos; Carla Freitas; Even Moland; Bastiaan Star; Carl André; Halvor Knutsen; Ian Bradbury; Jan Dierking; Christoph Petereit; David Righton; Julian Metcalfe; Kjetill S Jakobsen; Esben M Olsen; Sissel Jentoft
Journal:  Mol Ecol       Date:  2019-03-15       Impact factor: 6.185

4.  Stabilizing selection on Atlantic cod supergenes through a millennium of extensive exploitation.

Authors:  Marte Sodeland; Sissel Jentoft; Per Erik Jorde; Morten Mattingsdal; Jon Albretsen; Alf Ring Kleiven; Ann-Elin Wårøy Synnes; Sigurd Heiberg Espeland; Esben Moland Olsen; Carl Andrè; Nils Chr Stenseth; Halvor Knutsen
Journal:  Proc Natl Acad Sci U S A       Date:  2022-02-22       Impact factor: 12.779

5.  Supergene origin and maintenance in Atlantic cod.

Authors:  Michael Matschiner; Julia Maria Isis Barth; Ole Kristian Tørresen; Bastiaan Star; Helle Tessand Baalsrud; Marine Servane Ono Brieuc; Christophe Pampoulie; Ian Bradbury; Kjetill Sigurd Jakobsen; Sissel Jentoft
Journal:  Nat Ecol Evol       Date:  2022-02-17       Impact factor: 19.100

6.  Ancient DNA reveals a southern presence of the Northeast Arctic cod during the Holocene.

Authors:  Lourdes Martínez-García; Giada Ferrari; Anne Karin Hufthammer; Kjetill S Jakobsen; Sissel Jentoft; James H Barrett; Bastiaan Star
Journal:  Biol Lett       Date:  2022-05-04       Impact factor: 3.812

7.  The chronology of reindeer hunting on Norway's highest ice patches.

Authors:  Lars Pilø; Espen Finstad; Christopher Bronk Ramsey; Julian Robert Post Martinsen; Atle Nesje; Brit Solli; Vivian Wangen; Martin Callanan; James H Barrett
Journal:  R Soc Open Sci       Date:  2018-01-24       Impact factor: 2.963

8.  Ancient DNA reveals the chronology of walrus ivory trade from Norse Greenland.

Authors:  Bastiaan Star; James H Barrett; Agata T Gondek; Sanne Boessenkool
Journal:  Proc Biol Sci       Date:  2018-08-08       Impact factor: 5.349

9.  Metagenomic Shotgun Analyses Reveal Complex Patterns of Intra- and Interspecific Variation in the Intestinal Microbiomes of Codfishes.

Authors:  Even Sannes Riiser; Thomas H A Haverkamp; Srinidhi Varadharajan; Ørnulf Borgan; Kjetill S Jakobsen; Sissel Jentoft; Bastiaan Star
Journal:  Appl Environ Microbiol       Date:  2020-03-02       Impact factor: 4.792

  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.