Literature DB >> 28774651

Microarray profiling of circular RNAs and the potential regulatory role of hsa_circ_0071410 in the activated human hepatic stellate cell induced by irradiation.

Yuhan Chen1, Baoying Yuan1, Zhifeng Wu1, Yinying Dong1, Li Zhang1, Zhaochong Zeng2.   

Abstract

Radiation-induced liver fibrosis (RILF) is considered as a major complication of radiation therapy for liver cancer. Circular RNA (circRNA) has been recently identified as a functional noncoding RNA involving in various biological processes. However, the expression pattern and regulatory capacity of circRNA in the irradiated hepatic stellate cell (HSC), the main fibrogenic cell type, still remain unclear. A circRNA microarray was used to identify circRNA expression profiles in irradiated and normal HSC. Quantitative reverse transcription polymerase chain reaction (qRT-PCR) was performed to confirm the dysregulated circRNAs. Bioinformatic analyses including gene ontology (GO), KEGG pathway and circRNA/microRNA interaction network analysis were applied to predict the potential functions of circRNAs. Compared with the normal HSC, 179 circRNAs were found to be up-regulated and 630 circRNAs were down-regulated in irradiated HSC (fold change ≥2.0 and P<0.05). Six dysregulated circRNAs selected randomly were successfully verified by qRT-PCR. Bioinformatic analyses indicated that dysregulated circRNA might be involved in the cell response to irradiation and biological processes of hepatic fibrosis. Furthermore, inhibition of hsa_circ_0071410 increased the expression of miR-9-5p, resulting in the attenuation of irradiation induced HSC activation. In summary, this study revealed the expression profile and potential function of differentially expressed circRNAs in irradiated HSC, which provides novel clues for RILF study.
Copyright © 2017 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Circular RNA; Hepatic fibrosis; Hepatic stellate cell; Irradiation; Microarray

Mesh:

Substances:

Year:  2017        PMID: 28774651     DOI: 10.1016/j.gene.2017.07.078

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  28 in total

1.  Circular RNA 101368/miR-200a axis modulates the migration of hepatocellular carcinoma through HMGB1/RAGE signaling.

Authors:  Shaling Li; Huimin Gu; Yan Huang; Qian Peng; Rongrong Zhou; Panpan Yi; Ruochan Chen; Zebing Huang; Xingwang Hu; Yun Huang; Daolin Tang
Journal:  Cell Cycle       Date:  2018-10-22       Impact factor: 4.534

2.  Differential expression and bioinformatic analysis of circRNA in nonalcoholic steatohepatitis cirrhosis.

Authors:  Yuexin Fan; Yang Zheng; Jiahui Wang; Tiejian Zhao; Tianjian Liang
Journal:  Int J Clin Exp Pathol       Date:  2020-11-01

3.  The integrative regulatory network of circRNA and microRNA in keloid scarring.

Authors:  Jingpei Shi; Shuluan Yao; Pan Chen; Yuan Yang; Mengjiao Qian; Yi Han; Nan Wang; Yu Zhao; Yongjing He; Lechun Lyu; Di Lu
Journal:  Mol Biol Rep       Date:  2019-10-14       Impact factor: 2.316

4.  Circ_0008500 Knockdown Improves Radiosensitivity and Inhibits Tumorigenesis in Breast Cancer Through the miR-758-3p/PFN2 Axis.

Authors:  Deyou Kong; Dongxing Shen; Zhikun Liu; Jun Zhang; Jian Zhang; Cuizhi Geng
Journal:  J Mammary Gland Biol Neoplasia       Date:  2022-03-03       Impact factor: 2.673

Review 5.  [Role of circular RNAs in immune-related diseases].

Authors:  Weijie Zhan; Tao Yan; Jiawen Gao; Minkai Song; Ting Wang; Fei Lin; Haiyu Zhou; Li Li; Chao Zhang
Journal:  Nan Fang Yi Ke Da Xue Xue Bao       Date:  2022-02-20

6.  CircRNA protein tyrosine phosphatase receptor type a suppresses proliferation and induces apoptosis of lung adenocarcinoma cells via regulation of microRNA-582-3p.

Authors:  Jixin Jiang; Hui Ge; Jie Yang; Yunfei Qiao; Xingxiang Xu; Yanming Geng
Journal:  Bioengineered       Date:  2022-05       Impact factor: 6.832

Review 7.  Circular RNA as a Novel Biomarker and Therapeutic Target for HCC.

Authors:  Hongwu Meng; Ruowen Niu; Cheng Huang; Jun Li
Journal:  Cells       Date:  2022-06-17       Impact factor: 7.666

8.  Microarray profiles reveal that circular RNA hsa_circ_0007385 functions as an oncogene in non-small cell lung cancer tumorigenesis.

Authors:  Ming-Ming Jiang; Zhi-Tao Mai; Shan-Zhi Wan; Yu-Min Chi; Xin Zhang; Bao-Hua Sun; Qing-Guo Di
Journal:  J Cancer Res Clin Oncol       Date:  2018-01-25       Impact factor: 4.553

9.  Identification of Potentially Functional CircRNA-miRNA-mRNA Regulatory Network in Hepatocellular Carcinoma by Integrated Microarray Analysis.

Authors:  Xiaoming Lin; Yuhan Chen
Journal:  Med Sci Monit Basic Res       Date:  2018-04-30

Review 10.  Circular RNAs in immune responses and immune diseases.

Authors:  Xu Chen; Tian Yang; Wei Wang; Wenjin Xi; Tianze Zhang; Qi Li; Angang Yang; Tao Wang
Journal:  Theranostics       Date:  2019-01-01       Impact factor: 11.556

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