Literature DB >> 28774648

Low frequency oscillating gradient spin-echo sequences improve sensitivity to axon diameter: An experimental study in viable nerve tissue.

Lebina S Kakkar1, Oscar F Bennett2, Bernard Siow3, Simon Richardson3, Andrada Ianuş2, Tom Quick4, David Atkinson5, James B Phillips6, Ivana Drobnjak2.   

Abstract

Mapping axon diameters within the central and peripheral nervous system could play an important role in our understanding of nerve pathways, and help diagnose and monitor an array of neurological disorders. Numerous diffusion MRI methods have been proposed for imaging axon diameters, most of which use conventional single diffusion encoding (SDE) spin echo sequences. However, a growing number of studies show that oscillating gradient spin echo (OGSE) sequences can provide additional advantages over conventional SDE sequences. Recent theoretical results suggest that this is especially the case in realistic scenarios, such as when fibres have unknown or dispersed orientation. In the present study, we adopt the ActiveAx approach to experimentally investigate the extent of these advantages by comparing the performances of SDE and trapezoidal OGSE in viable nerve tissue. We optimise SDE and OGSE ActiveAx protocols for a rat peripheral nerve tissue and test their performance using Monte Carlo simulations and a 800 mT/m gradient strength pre-clinical imaging experiment. The imaging experiment uses excised sciatic nerve from a rat's leg placed in a MRI compatible viable isolated tissue (VIT) maintenance chamber, which keeps the tissue in a viable physiological state that preserves the structural complexity of the nerve and enables lengthy scan times. We compare model estimates to histology, which we perform on the nerve post scanning. Optimisation produces a three-shell SDE and OGSE ActiveAx protocol, with the OGSE protocol consisting of one SDE sequence and two low-frequency oscillating gradient waveform sequences. Both simulation and imaging results show that the OGSE ActiveAx estimates of the axon diameter index have a higher accuracy and a higher precision compared to those from SDE. Histology estimates of the axon diameter index in our nerve tissue samples are 4-5.8 μm and these are excellently matched with the OGSE estimates 4.2-6.5 μm, while SDE overestimates at 5.2-8 μm for the same sample. We found OGSE estimates to be more precise with on average a 0.5 μm standard deviation compared to the SDE estimates which have a 2 μm standard deviation. When testing the robustness of the estimates when the number of the diffusion gradient directions reduces, we found that both OGSE and SDE estimates are affected, however OGSE is more robust to these changes than the SDE. Overall, these results suggest, quantitatively and in in vivo conditions, that low-frequency OGSE sequences may provide improved accuracy of axon diameter mapping compared to standard SDE sequences.
Copyright © 2017 The Authors. Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Axon diameter; Diffusion imaging; Oscillating gradient spin echo; Pulsed gradient spin echo; Single diffusion encoding; Viable tissue

Mesh:

Year:  2017        PMID: 28774648     DOI: 10.1016/j.neuroimage.2017.07.060

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  9 in total

1.  Toward faster inference of micron-scale axon diameters using Monte Carlo simulations.

Authors:  Morgan Mercredi; Melanie Martin
Journal:  MAGMA       Date:  2018-03-07       Impact factor: 2.310

Review 2.  Connectome 2.0: Developing the next-generation ultra-high gradient strength human MRI scanner for bridging studies of the micro-, meso- and macro-connectome.

Authors:  Susie Y Huang; Thomas Witzel; Boris Keil; Alina Scholz; Mathias Davids; Peter Dietz; Elmar Rummert; Rebecca Ramb; John E Kirsch; Anastasia Yendiki; Qiuyun Fan; Qiyuan Tian; Gabriel Ramos-Llordén; Hong-Hsi Lee; Aapo Nummenmaa; Berkin Bilgic; Kawin Setsompop; Fuyixue Wang; Alexandru V Avram; Michal Komlosh; Dan Benjamini; Kulam Najmudeen Magdoom; Sudhir Pathak; Walter Schneider; Dmitry S Novikov; Els Fieremans; Slimane Tounekti; Choukri Mekkaoui; Jean Augustinack; Daniel Berger; Alexander Shapson-Coe; Jeff Lichtman; Peter J Basser; Lawrence L Wald; Bruce R Rosen
Journal:  Neuroimage       Date:  2021-08-28       Impact factor: 7.400

3.  Towards microstructure fingerprinting: Estimation of tissue properties from a dictionary of Monte Carlo diffusion MRI simulations.

Authors:  Gaëtan Rensonnet; Benoît Scherrer; Gabriel Girard; Aleksandar Jankovski; Simon K Warfield; Benoît Macq; Jean-Philippe Thiran; Maxime Taquet
Journal:  Neuroimage       Date:  2018-09-30       Impact factor: 6.556

4.  A simple estimate of axon size with diffusion MRI.

Authors:  Kevin D Harkins; Christian Beaulieu; Junzhong Xu; John C Gore; Mark D Does
Journal:  Neuroimage       Date:  2020-12-08       Impact factor: 6.556

5.  Test-retest reproducibility of in vivo oscillating gradient and microscopic anisotropy diffusion MRI in mice at 9.4 Tesla.

Authors:  Naila Rahman; Kathy Xu; Mohammad Omer; Matthew D Budde; Arthur Brown; Corey A Baron
Journal:  PLoS One       Date:  2021-11-05       Impact factor: 3.240

6.  Relevance of time-dependence for clinically viable diffusion imaging of the spinal cord.

Authors:  Francesco Grussu; Andrada Ianuş; Carmen Tur; Ferran Prados; Torben Schneider; Enrico Kaden; Sébastien Ourselin; Ivana Drobnjak; Hui Zhang; Daniel C Alexander; Claudia A M Gandini Wheeler-Kingshott
Journal:  Magn Reson Med       Date:  2018-09-05       Impact factor: 4.668

7.  Towards a 'resolution limit' for DW-MRI tumor microstructural models: A simulation study investigating the feasibility of distinguishing between microstructural changes.

Authors:  Damien J McHugh; Penny L Hubbard Cristinacce; Josephine H Naish; Geoffrey J M Parker
Journal:  Magn Reson Med       Date:  2018-10-19       Impact factor: 4.668

8.  Time-dependent diffusion in undulating thin fibers: Impact on axon diameter estimation.

Authors:  Jan Brabec; Samo Lasič; Markus Nilsson
Journal:  NMR Biomed       Date:  2019-12-23       Impact factor: 4.044

9.  Time-dependent diffusion MRI probes cerebellar microstructural alterations in a mouse model of Down syndrome.

Authors:  Dan Wu; Yi Zhang; Bei Cheng; Susumu Mori; Roger H Reeves; Feng J Gao
Journal:  Brain Commun       Date:  2021-04-05
  9 in total

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