| Literature DB >> 28769662 |
Yi-Qin Liu1, Qing-Song Gao1, Hong-Wei Chen1.
Abstract
Seven new species of the Scaptodrosophila brunnea species group are described from east Asia: S. maculatasp. n., S. melanogastersp. n., S. nigricostatasp. n., S. nigripectasp. n., S. obscuratasp. n., S. protenipenissp. n. and S. rhinasp. n. Three known species, S. parabrunnea (Tsacas & Chassagnard), S. pressobrunnea (Tsacas & Chassagnard) and S. scutellimargo (Duda) are redescribed. A key to all the examined species in the brunnea group is provided. Species delimitations have been improved by integrating the DNA sequences with morphological information. The intra- and interspecific pairwise p-distances (proportional distance) are summarized. Some nucleotide sites with fixed status in the alignment of the COI sequences (664 nucleotide sites in length) are used as "pure" molecular diagnostic characters to delineate species in the brunnea group.Entities:
Keywords: China; DNA barcoding; Scaptodrosophila brunnea species group; integrated taxonomy
Year: 2017 PMID: 28769662 PMCID: PMC5523211 DOI: 10.3897/zookeys.671.11275
Source DB: PubMed Journal: Zookeys ISSN: 1313-2970 Impact factor: 1.546
Specimens of the brunnea group used for DNA barcoding.
| Species | Sex | BOLD Process ID | GenBank accession number | Collection site |
|---|---|---|---|---|
|
| ♂ |
|
| Menglun, Mengla, Yunnan, China |
|
| ♂ |
|
| Nonggang, Chongzuo, Guangxi, China |
|
| ♀ |
|
| Nonggang, Chongzuo, Guangxi, China |
|
| ♂ |
|
| Jianfengling, Ledong, Hainan, China |
|
| ♂ |
|
| Iriomote Is., Okinawa, Japan |
|
| ♀ |
|
| Longdong, Guangzhou, Guangdong, China |
|
| ♂ |
|
| Liuxihe, Conghua, Guangdong, China |
|
| ♂ |
|
| Wangtianshu, Mengla, Yunnan, China |
|
| ♂ |
|
| Wangtianshu, Mengla, Yunnan, China |
|
| ♂ |
|
| Wangtianshu, Mengla, Yunnan, China |
|
| ♂ |
|
| Menglun, Mengla, Yunnan, China |
|
| ♀ |
| Jianfengling, Ledong, Hainan, China | |
|
| ♂ |
|
| Menglun, Mengla, Yunnan, China |
|
| ♂ |
|
| Menglun, Mengla, Yunnan, China |
|
| ♂ |
|
| Wangtianshu, Mengla, Yunnan, China |
|
| ♂ |
|
| Wangtianshu, Mengla, Yunnan, China |
|
| ♀ |
| Menglun, Mengla, Yunnan, China | |
|
| ♀ |
| Wangtianshu, Mengla, Yunnan, China | |
|
| ♂ |
|
| Baihualing, Baoshan, Yunnan, China |
|
| ♂ |
|
| Baihualing, Baoshan, Yunnan, China |
|
| ♂ |
|
| Hesong, Menghai, Yunnan, China |
|
| ♂ |
|
| Hesong, Menghai, Yunnan, China |
|
| ♂ |
|
| Menglun, Mengla, Yunnan, China |
|
| ♀ |
| Hesong, Menghai, Yunnan, China | |
|
| ♂ |
|
| Baihualing, Baoshan, Yunnan, China |
|
| ♂ |
|
| Baihualing, Baoshan, Yunnan, China |
|
| ♂ |
|
| Wangtianshu, Mengla, Yunnan, China |
|
| ♀ |
| Baihualing, Baoshan, Yunnan, China | |
|
| ♂ |
|
| Wangtianshu, Mengla, Yunnan, China |
|
| ♂ |
|
| Wangtianshu, Mengla, Yunnan, China |
|
| ♂ |
|
| Wangtianshu, Mengla, Yunnan, China |
|
| ♂ |
|
| Wangtianshu, Mengla, Yunnan, China |
|
| ♂ |
|
| Wangtianshu, Mengla, Yunnan, China |
|
| ♂ |
|
| Menglun, Mengla, Yunnan, China |
|
| ♀ |
|
| Menglun, Mengla, Yunnan, China |
|
| ♂ |
|
| Menglun, Mengla, Yunnan, China |
|
| ♂ |
|
| Hesong, Menghai, Yunnan, China |
|
| ♂ |
|
| Baihualing, Baoshan, Yunnan, China |
|
| ♂ |
|
| Hesong, Menghai, Yunnan, China |
|
| ♂ |
|
| Hesong, Menghai, Yunnan, China |
|
| ♀ |
| Hesong, Menghai, Yunnan, China | |
|
| ♂ |
|
| Menglun, Mengla, Yunnan, China |
|
| ♂ |
|
| Baihualing, Baoshan, Yunnan, China |
|
| ♀ |
| Menglun, Mengla, Yunnan, China |
Summary of intra- and interspecific genetic distances in the brunnea group.
| Species | N | Intraspecific genetic distances | Interspecific genetic distances |
|---|---|---|---|
| Min. / Max. / Mean ± SD | Min./ Max./ Mean ± SD | ||
|
| 1 | NA | 0.033/ 0.130/ 0.106 ± 0.031 |
|
| 2 | NA | 0.053/ 0.125/ 0.103 ± 0.026 |
|
| 9 | 0.002/ 0.024/ 0.009 ± 0.006 | 0.053/ 0.123/ 0.100 ± 0.014 |
|
| 6 | 0.000/ 0.005/ 0.002 ± 0.002 | 0.033/ 0.125/ 0.107 ± 0.015 |
|
| 6 | 0.000/ 0.027/ 0.017 ± 0.009 | 0.048/ 0.130/ 0.104 ± 0.019 |
|
| 4 | 0.002/ 0.008/ 0.005 ± 0.002 | 0.087/ 0.123/ 0.103 ± 0.008 |
|
| 3 | 0.003/ 0.008/ 0.005 ± 0.002 | 0.083/ 0.123/ 0.103 ± 0.009 |
|
| 6 | 0.000/ 0.009/ 0.005 ± 0.003 | 0.087/ 0.123/ 0.108 ± 0.010 |
|
| 4 | 0.000/ 0.003/ 0.002 ± 0.001 | 0.048/ 0.128/ 0.100 ± 0.020 |
|
| 3 | 0.000/ 0.003/ 0.002 ± 0.002 | 0.083/ 0.117/ 0.103 ± 0.013 |
N – the numbers of COI sequences involved in distance calculation; Min. – minimum; Max. – maximum; SD – standard deviation; NA – no applicable.
Figure 1.Neighbor-joining (NJ) tree of the brunnea group. The numbers around the nodes are bootstrap percentages (BP). BP values lower than 50 are not shown.
Figure 2.Diagnostic nucleotide sites in the alignment of COI sequences of the brunnea group. Numbers at the top show the positions of the sites in the COI alignment (660 bp in length). Shaded sites are diagnostic for each species. Hyphens (-) indicate missing data.
Figure 3.Head, mesonotum, scutellum, pleura and abdomen of male. A–D E–H . Scale bars 1 mm.
Figure 7.Head, mesonotum, scutellum, pleura and abdomen of male. A–D sp. n. E–H sp. n. Scale bars 1 mm.
Figure 8.(Tsacas & Chassagnard, 1976). A, B epandrium (epand), surstylus (sur) and cercus (cerc) (lateral and posterior views) C, D hypandrium (hypd), parameres (pm), gonopods (gon), aedeagus (aed) and aedeagal apodeme (aed a) (ventral and lateral views). Scale bars 0.1 mm.
Figure 17.sp. n. A, B epandrium, surstylus and cercus (lateral and posterior views) C, D hypandrium, parameres, gonopods, aedeagus and aedeagal apodeme (ventral and lateral views) E oviscapt (lateral view). Scale bars 0.1 mm.
Figure 9.(Tsacas & Chassagnard, 1976). A, B epandrium, surstylus and cercus (lateral and posterior views) C, D hypandrium, parameres, gonopods, aedeagus and aedeagal apodeme (ventral and lateral views) E oviscapt (lateral view). Scale bars 0.1 mm.
Figure 13.sp. n. A, B epandrium, surstylus and cercus (lateral and posterior views) C, D hypandrium, parameres, gonopods, aedeagus and aedeagal apodeme (ventral and lateral views) E oviscapt (lateral view). Scale bars 0.1 mm.
Figure 15sp. n. A, B epandrium, surstylus and cercus (lateral and posterior views) C, D hypandrium, parameres, gonopods, aedeagus and aedeagal apodeme (ventral and lateral views) E oviscapt (lateral view). Scale bars 0.1 mm.
Figure 4.Head, mesonotum, scutellum, pleura and abdomen of male. A–D E–H sp. n. Scale bars 1 mm.
Figure 10.(Duda, 1924). A, B epandrium, surstylus and cercus (lateral and posterior views) C, D hypandrium, parameres, gonopods, aedeagus and aedeagal apodeme (ventral and lateral views) E oviscapt (lateral view). Scale bars 0.1 mm.
Figure 11.sp. n. A, B epandrium, surstylus and cercus (lateral and posterior views) C, D hypandrium, parameres, gonopods, aedeagus and aedeagal apodeme (ventral and lateral views) E oviscapt (lateral view). Scale bars 0.1 mm.
Figure 5.Head, mesonotum, scutellum, pleura and abdomen of male. A–D sp. n. E–H sp. n. Scale bars 1 mm.
Figure 12.sp. n. A, B epandrium, surstylus and cercus (lateral and posterior views) C, D hypandrium, parameres, gonopods, aedeagus and aedeagal apodeme (ventral and lateral views) E oviscapt (lateral view). Scale bars 0.1 mm.
Figure 6.Head, mesonotum, scutellum, pleura and abdomen of male. A–D sp. n. E–H sp. n. Scale bars 1 mm.
Figure 14.sp. n. A, B epandrium, surstylus and cercus (lateral and posterior views) C, D hypandrium, parameres, gonopods, aedeagus and aedeagal apodeme (ventral and lateral views). Scale bars 0.1 mm.
Figure 16.sp. n. A, B epandrium, surstylus and cercus (lateral and posterior views) C, D hypandrium, parameres, gonopods, aedeagus and aedeagal apodeme (ventral and lateral views) E oviscapt (lateral view). Scale bars 0.1 mm.
| 1 | Body brown; carina large; arista exceptionally large, with 4–5 curved long dorsal branches and 3 ventral branches in addition to terminal bifurcation (Figs |
|
| 2 | Hypandrium lacking pubescence medially (Figs |
|
| – | Hypandrium pubescent medially (Figs |
|
| 3 | Mesonotum yellowish brown, with four brown longitudinal stripes sublaterally (Fig. |
|
| – | Mesonotum yellowish brown, lacking longitudinal stripe (Fig. |
|
| 4 | Aedeagus pubescent ventrally (Figs |
|
| – | Aedeagus lacking pubescence (Figs |
|
| 5 | Mesonotum brown, with two yellowish brown longitudinal stripes submedially (Fig. |
|
| – | Mesonotum yellowish brown, with three or four longitudinal stripes (Figs |
|
| 6 | Mesonotum yellowish brown, with four brown longitudinal stripes (Fig. |
|
| – | Mesonotum yellowish brown, with three dark brown longitudinal stripes medially and sublaterally (Fig. |
|
| 7 | Mesonotum yellowish brown, with a brownish longitudinal stripe (Fig. |
|
| – | Mesonotum brown, with two or three brownish longitudinal stripes (Figs |
|
| 8 | Mesonotum with a longitudinal stripe on 1/3 posterior (Fig. |
|
| – | Mesonotum yellowish brown, with a brown longitudinal stripe medially (Fig. |
|
| 9 | Mesonotum brown, with three yellowish brown longitudinal stripes (Fig. |
|
| – | Mesonotum brown, with two yellowish brown longitudinal stripes (Figs |
|
| 10 | Frons brown and glossy (Fig. |
|
| – | Frons brownish and dull (Fig. |
|