Literature DB >> 28766155

A facile synthesis of amide-based receptors under microwave conditions: investigation of their anion recognition properties by experimental and computational tools.

Gülşen Öztürk1, Salih Subari2, Sevil Şeker2, Mahmut Toğrul2, Şafak Özhan Kocakay2, Selami Ercan3, Necmettin Pirinççioğlu4.   

Abstract

Two novel amide-based receptors were synthesized under microwave irradiation. Their chemical structures were confirmed by IR, 1H NMR, 13C NMR, and elemental analysis. The binding properties of these amide-based receptors to various anions (H2PO4-, HSO4-, C6H5CO2-, CH3CO2-, ClO4-, F-, Cl-, and Br-) were examined by UV titration in THF at 20 °C. The results indicated that the receptors form 1:1 complexes with anions and they have the strongest affinity for fluoride (F-) among the anions considered. Molecular dynamics calculations by AMBER and quantum mechanical calculations performed at the B3LYP and M062X levels of theory using the 6-31 + g(d,p) basis set provided models for the complexation mode between the receptors and anions and yielded binding energies for the complexes. Graphical abstract The computed interaction mode of tripodals (1a and 1b) with fluoride.

Entities:  

Keywords:  Amides; Anions; B3LYP; DFT; M062X; Microwave; Molecular dynamics calculation; Recognition; Synthesis; Tripodals

Year:  2017        PMID: 28766155     DOI: 10.1007/s00894-017-3390-0

Source DB:  PubMed          Journal:  J Mol Model        ISSN: 0948-5023            Impact factor:   1.810


  16 in total

1.  Anion Recognition and Sensing: The State of the Art and Future Perspectives.

Authors:  Paul D. Beer; Philip A. Gale
Journal:  Angew Chem Int Ed Engl       Date:  2001-02-02       Impact factor: 15.336

2.  UCSF Chimera--a visualization system for exploratory research and analysis.

Authors:  Eric F Pettersen; Thomas D Goddard; Conrad C Huang; Gregory S Couch; Daniel M Greenblatt; Elaine C Meng; Thomas E Ferrin
Journal:  J Comput Chem       Date:  2004-10       Impact factor: 3.376

3.  Design of Density Functionals by Combining the Method of Constraint Satisfaction with Parametrization for Thermochemistry, Thermochemical Kinetics, and Noncovalent Interactions.

Authors:  Yan Zhao; Nathan E Schultz; Donald G Truhlar
Journal:  J Chem Theory Comput       Date:  2006-03       Impact factor: 6.006

4.  Exchange-correlation functional with broad accuracy for metallic and nonmetallic compounds, kinetics, and noncovalent interactions.

Authors:  Yan Zhao; Nathan E Schultz; D G Truhlar
Journal:  J Chem Phys       Date:  2005-10-22       Impact factor: 3.488

5.  What anions do to N-H-containing receptors.

Authors:  Valeria Amendola; David Esteban-Gómez; Luigi Fabbrizzi; Maurizio Licchelli
Journal:  Acc Chem Res       Date:  2006-05       Impact factor: 22.384

6.  Development of the Colle-Salvetti correlation-energy formula into a functional of the electron density.

Authors: 
Journal:  Phys Rev B Condens Matter       Date:  1988-01-15

7.  Quinoxaline-imidazolium receptors for unique sensing of pyrophosphate and acetate by charge transfer.

Authors:  N Jiten Singh; Eun Jin Jun; Kavitha Chellappan; Daniel Thangadurai; R Prakash Chandran; In-Chul Hwang; Juyoung Yoon; Kwang S Kim
Journal:  Org Lett       Date:  2007-02-01       Impact factor: 6.005

8.  Anion recognition by azophenol thiourea-based chromogenic sensors: a combined DFT and molecular dynamics investigation.

Authors:  Ming Wah Wong; Huifang Xie; Soo Tin Kwa
Journal:  J Mol Model       Date:  2012-07-31       Impact factor: 1.810

9.  Anion receptors containing thiazine-1,1-dioxide heterocycles as hydrogen bond donors.

Authors:  Hong-Bo Wang; James A Wisner; Michael C Jennings
Journal:  Beilstein J Org Chem       Date:  2010-05-19       Impact factor: 2.883

10.  Direct synthesis of amides from carboxylic acids and amines using B(OCH2CF3)3.

Authors:  Rachel M Lanigan; Pavel Starkov; Tom D Sheppard
Journal:  J Org Chem       Date:  2013-04-16       Impact factor: 4.354

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