Rachel M Lanigan1, Pavel Starkov, Tom D Sheppard. 1. Department of Chemistry, University College London, Christopher Ingold Laboratories, 20 Gordon St, London, WC1H 0AJ, UK.
Abstract
B(OCH2CF3)3, prepared from readily available B2O3 and 2,2,2-trifluoroethanol, is as an effective reagent for the direct amidation of a variety of carboxylic acids with a broad range of amines. In most cases, the amide products can be purified by a simple filtration procedure using commercially available resins, with no need for aqueous workup or chromatography. The amidation of N-protected amino acids with both primary and secondary amines proceeds effectively, with very low levels of racemization. B(OCH2CF3)3 can also be used for the formylation of a range of amines in good to excellent yield, via transamidation of dimethylformamide.
B(OCH2CF3)3, prepared from readily available B2O3 and 2,2,2-trifluoroethanol, is as an effective reagent for the direct amidation of a variety of carboxylic acids with a broad range of amines. In most cases, the amide products can be purified by a simple filtration procedure using commercially available resins, with no need for aqueous workup or chromatography. The amidation of N-protected amino acids with both primary and secondary amines proceeds effectively, with very low levels of racemization. B(OCH2CF3)3 can also be used for the formylation of a range of amines in good to excellent yield, via transamidation of dimethylformamide.
The amide bond is widely
prevalent in both naturally occurring
and synthetic compounds. It is increasingly important in pharmaceutical
chemistry, being present in 25% of available drugs, with amidation
reactions being among the most commonly used reactions in medicinal
chemistry. There is considerable interest in the development of new
approaches to direct amidation,[1,2] and organizations such
as the ACS Green Chemistry Institute Pharmaceutical Roundtable have
indicated that amide bond formation is one of the most important reactions
used in industry for which better reagents are required.[3] Although there are a large range of reagents
and strategies for amide bond formation available,[4] few can really be considered ideal. Currently there is
a focus on the development of novel, atom-economical, benign methods
for amidation, and there have been many recent developments in this
field. An important consideration here is the ease with which the
reagent or catalyst can be separated from the resulting product. Direct
thermal amide formation from amines and carboxylic acids has been
reported using toluene as the reaction solvent[5] or using radiofrequency heating under neat conditions,[6] and this reagent-free approach is practical in
many cases, but the substrate scope is quite limited. Alternatively,
a number of metal-based catalytic systems have also been reported,
with recent examples including the use of Ti(OPr)4,[7] Cp2ZrCl2,[5] and ZrCl4[5,8] under strictly anhydrous dehydrating conditions.
Boron mediated amidation reactions have attracted considerable attention,[9−12] and boronic acids have been shown to be effective catalysts for
direct amide formation from carboxylic acids and amines.[9] In general, boronic acid catalyzed amidation
reactions require the removal of water from the reaction either by
a dehydrating agent such as molecular sieves or by azeotropic reflux.
The reactions also typically require relatively dilute reaction conditions.
Stoichiometric boron reagents for amidation often require anhydrous
conditions and/or an excess of either the acid or the amine, however.[10−12] While many of these boron-mediated processes are promising, to date
the substrate scope is limited to relatively activated systems.We have recently reported that simple borate esters are effective
reagents for the direct synthesis of amides from carboxylic acids
or primary amides.[13] Although commercially
available B(OMe)3 was useful for amidation in some cases,
the 2,2,2-trifluoroethanol-derived ester B(OCH2CF3)3 gave consistently higher conversions and was applicable
to a much wider range of substrates. The use of B(OCH2CF3)3 as an amidation reagent is operationally simple,
as the reaction can be carried out open to the air with equimolar
quantities of acid andamine in a solvent in which most amines and
acids are readily soluble (MeCN). In all of the examples examined,
the thermal background yield of amide was found to be low in comparison
to that obtained in the presence of the borate ester.Herein,
we report a method for the large-scale preparation of B(OCH2CF3)3 from readily available B2O3 and a full study of the scope and limitations of B(OCH2CF3)3 as a direct amidation reagent.
We also describe its application to the formylation of amines by transamidation
of DMF. Importantly, a solid phase purification procedure has been
developed that enables the amide products to be obtained without aqueous
workup or chromatography.
Results and Discussion
Preparation of the B(OCH2CF3)3 Reagent
In our initial
work, we prepared B(OCH2CF3)3 by
reaction of 2,2,2-trifluoroethanol
with BBr3 at low temperature (Scheme 1). This gave B(OCH2CF3)3 in excellent
yield after purification by distillation. However, BBr3 is somewhat expensive and can be difficult to handle because of
the fact that it readily hydrolyzes on contact with moisture. We therefore
sought an alternative method for preparing the amidation reagent.
The synthesis of B(OCH2CF3)3 has
been previously reported from boric acid[14] and from B2O3.[15] We found the latter procedure to be particularly straightforward
on multigram scale. Simply heating a suspension of B2O3 in 2,2,2-trifluoroethanol for 24 h, followed by distillation,
gave the borate ester in 33–48% yield on 25–50 g scale,
and up to 28% of the trifluoroethanol could be recovered and recycled.
Although this procedure is lower yielding in comparison to our original
approach, B2O3 is considerably cheaper than
BBr3 and the reaction is not particularly moisture-sensitive.
The B(OCH2CF3)3 reagent can be stored
at room temperature under inert atmosphere for at least four months
without any observable deterioration.
Scheme 1
Synthesis of B(OCH2CF3)3 from (a)
BBr3 and (b) B2O3
Development of a Solid Phase Workup Procedure
and Evaluation
of Other Borates
In order to explore different workup procedures
and reagents, the amidation of phenylacetic acid with benzylamine
was selected as a test reaction (Table 1).
After the amidation reaction, the reaction mixture contains the amide
product, borate-ester derived byproducts, and potentially some unreacted
amine and/or carboxylic acid. In our preliminary report, the amidation
reactions were purified by acid and base washes to remove these impurities.[13] Under our original conditions (2 equiv of borate,
15 h, 80 °C), the amide was obtained in 91% yield (entry 1).
The reaction time could be reduced from 15 to 5 h with only a small
decrease in yield (entry 2). We explored an alternative solid phase
workup for the amidation reactions involving treatment of the crude
reaction mixture with three commercially available resins (Amberlyst
acidic, basic and Amberlite boron scavenger resins), followed by MgSO4, and then filtration/evaporation (Figure 1). This provided the amide product in a comparable yield and
purity to the aqueous workup (entry 3). This procedure is more convenient
for general use and could potentially be used to enable automation
of the reaction.
Table 1
Comparison of Boron Reagents and Workup
Procedures
entry
reagent
time [h]
yield [%]a
1
B(OCH2CF3)3
15
91b
2
B(OCH2CF3)3
5
88b
3
B(OCH2CF3)3
5
87c
4
B(OMe)3
5
69c
5
B(OMe)3
15
92b
6
B2O3
5
15b
7
1
5
72c
8
1
15
81c
9
none
15
18b
Isolated yield.
Aqueous
workup procedure.
Solid
phase workup procedure.
Figure 1
Solid phase
workup of amidation reactions.
Isolated yield.Aqueous
workup procedure.Solid
phase workup procedure.Solid phase
workup of amidation reactions.We subsequently compared different boron reagents under these
conditions.
Trimethyl borate was effective for amidation (entries 4 and 5), but
a longer reaction time was required in order to obtain a good yield.
B2O3 itself showed low reactivity in the amidation
reaction with only 15% yield after a 5 h reaction time (entry 6).
Commercially available trimethoxyboroxine 1 is reported
to be a stronger Lewis acid than both B(OMe)3 and B(OCH2CF3)3 but did not offer any significant
advantage in the amidation reaction (entry 7).[14] Interestingly, the reaction with 1 did not
lead to comparable conversions even after a 15 h reaction time (entry
8). This may be due to the fact that 1 can more readily
form oligomeric species such as B2O3 upon heating,
and such species are much less active in the amidation reaction. It
should be noted that the thermal reaction in the absence of any reagent
gave only an 18% yield of the amide. In our preliminary communicaton[13] we determined the thermal reaction yield for
the 15 other amidation reactions studied to be <9%. This clearly
demonstrates the importance of the borate ester in mediating the amidation
reaction.
Scope of the Amidation Reactions
The full scope of
the amidation reactions was explored with a wide range of amines and
carboxylic acids. To evaluate the amine scope, the preparation of
phenylactetamides (Figure 2, 2a–2x) from phenylacetic acid was explored using
our standard reaction conditions (2 equiv of B(OCH2CF3)3, MeCN, 80 °C). Primary amines including
benzylamines (2a–2d), simple aliphatic
amines (2e) and even functionalized examples (2f–2h) could be coupled in good yield. A range
of cyclic secondary amines also underwent amidation efficiently, including
several medicinally relevant examples (2i–2m). The hydrochloride salt of dimethylamine underwent amidation
in good yield when two or more equivalents of the hydrochloride salt
were employed (2n) in combination with 2 equiv of Hünig’s
base. The acyclic secondary aminedibenzylamine showed poor reactivity,
however (2o), and a significant quantity of the secondary N-benzyl amide 2a was obtained, indicating
that partial cleavage of one of the benzyl units had occurred. Less
nucleophilic systems such as anilines (2p–2u) and tert-butylamine (2v)
could also be coupled, but higher reaction temperatures were needed
in some cases in order to obtain reasonable yields. Extremely unreactive
systems such as 2-pyridylamine (2u) gave only very low
yields of the coupling product and adamantylamine (2w) and 2-mercaptoaniline (2x) did not undergo amidation
at all.
Figure 2
Scope of phenylacetamide synthesis with different amines. All reactions
were carried out at 80 °C for 5 h, and the solid phase workup
procedure was used unless otherwise stated. (a) Aqueous workup procedure;
(b) 80 °C for 15 h; (c) 100 °C for 15 h in a sealed tube;
(d) purified by column chromatography; (e) from 1 equiv of Me2NH·HCl, 1 equiv of DIPEA; (f) from 2 equiv of Me2NH·HCl, 2 equiv of DIPEA; (g) from 3 equiv of Me2NH·HCl, 3 equiv of DIPEA; (h) 6% of 2a was
also isolated; (i) 100 °C for 24 h in a sealed tube.
Scope of phenylacetamide synthesis with different amines. All reactions
were carried out at 80 °C for 5 h, and the solid phase workup
procedure was used unless otherwise stated. (a) Aqueous workup procedure;
(b) 80 °C for 15 h; (c) 100 °C for 15 h in a sealed tube;
(d) purified by column chromatography; (e) from 1 equiv of Me2NH·HCl, 1 equiv of DIPEA; (f) from 2 equiv of Me2NH·HCl, 2 equiv of DIPEA; (g) from 3 equiv of Me2NH·HCl, 3 equiv of DIPEA; (h) 6% of 2a was
also isolated; (i) 100 °C for 24 h in a sealed tube.The preparation of N-benzylamides
(Figure 3, 3a–3v) was explored
using our standard conditions in order to evaluate the carboxylic
acid scope. A range of N-benzyl-2-arylacetamides
(2a, 3a–3i) were obtained
in very good yield including α-substituted (3b)
and heteroaromatic acids (3h). A simple aliphatic acid
(3j) and N-Boc sarcosine (3k) also underwent amidation effectively. Carboxylic acids with conjugated
alkyne (3l) and alkene groups (3m–3o) could be coupled efficiently, but more hindered examples
required a higher reaction temperature (3n). More hindered
aliphatic systems including trifluoroacetic acid (3p)
and pivalic acid (3q) could also be coupled effectively
by using a higher reaction temperature. Benzoic acids (3r–3v) were also relatively unreactive and required
higher reaction temperatures in order for reasonable conversions to
be obtained.
Figure 3
Scope of N-benzylamide synthesis using
different
carboxylic acids. All reactions were carried out at 80 °C for
5 h, and the solid phase workup procedure was used unless otherwise
stated. (a) Aqueous workup procedure; (b) 80 °C for 15 h; (c)
100 °C for 15 h in a sealed tube.
Scope of N-benzylamide synthesis using
different
carboxylic acids. All reactions were carried out at 80 °C for
5 h, and the solid phase workup procedure was used unless otherwise
stated. (a) Aqueous workup procedure; (b) 80 °C for 15 h; (c)
100 °C for 15 h in a sealed tube.The coupling of a selection of other combinations of acids
and
amines (Figure 4, 4a–4g) was explored, and yields were generally consistent with
our observations of the relative reactivity of amines/acids outlined
above. Thus, aliphatic amine/acid combinations (4a–4d) generally gave reasonable yields of the amide, even with
fairly volatile components (4a, 4b). Less
reactive picolinic acid underwent amidation in relatively good yield
with glycine methyl ester (4e). The reaction of a fairly
nucleophilic aniline with an unsaturated acid also proceeded in good
yield (4f). Pleasingly, we were also able to prepare
paracetamol (4g) in moderate yield by coupling acetic
acid with 4-hydroxyaniline. Interestingly, monoamidation of a dicarboxylic
acid could also be achieved in 53% yield (4h). In the
majority of cases, the amides 2–4 could be purified by the solid phase workup procedure, with the
exception of amides containing strongly basic (2i, 2j, 2t, 2u, 4e) or
acidic (4h) groups, which generally required chromatographic
purification.
Figure 4
Further scope of the amidation reaction. All reactions
were carried
out at 80 °C for 15 h and purified by solid phase workup unless
otherwise stated. (a) Aqueous workup procedure; (b) 80 °C for
5 h; (c) purified by column chromatography.
Further scope of the amidation reaction. All reactions
were carried
out at 80 °C for 15 h and purified by solid phase workup unless
otherwise stated. (a) Aqueous workup procedure; (b) 80 °C for
5 h; (c) purified by column chromatography.Lactam formation could also be achieved effectively (Figure 5, 5a–5c). The background
reaction for formation of six- (5a) and seven-membered
(5b) lactams from simple thermal condensation was low
in comparison to that observed in the presence of B(OCH2CF3)3. Lactamization of Boc-l-ornithine
(5c) proceeded in 84% yield.
Figure 5
Lactamization reactions.
All reactions were carried out at 80 °C
for 5 h unless otherwise stated and purified by solid phase workup.
(a) Yield without B(OCH2CF3)3; (b)
100 °C for 5 h in a sealed tube; (c) 80 °C for 15 h; (d)
[α]D25 −9.5 (c 1.22, MeOH) [lit.[16] [α]D20 −10.6 (c 1.22, MeOH)].
Lactamization reactions.
All reactions were carried out at 80 °C
for 5 h unless otherwise stated and purified by solid phase workup.
(a) Yield without B(OCH2CF3)3; (b)
100 °C for 5 h in a sealed tube; (c) 80 °C for 15 h; (d)
[α]D25 −9.5 (c 1.22, MeOH) [lit.[16] [α]D20 −10.6 (c 1.22, MeOH)].To evaluate the amidation reaction on larger scales,
both a secondary
(4c) and a tertiary amide (2k) were prepared
using gram quantities of material (Scheme 2). Although in both cases a slight reduction in yield was observed,
more than 1 g of each amide could be synthesized in less than 15 mL
of MeCN. In each case, the product was purified using the solid phase
workup, without the need for aqueous workup or column chromatography.
For comparison, the same reaction to give 1 g of 4c using
a boronic acid catalyst would require ca. 70 mL of solvent.[9i]
Scheme 2
Gram Scale Amidation Reactions
Coupling of Acids with
an Adjacent Chiral Center
The
amidation of carboxylic acids bearing a chiral center at the α-position
is of high importance, and the coupling of α-amino acids is
of particular significance. While there are many methods for achieving
such couplings, the fact that B(OCH2CF3)3-mediated amidation reactions
can be easily purified by a solid phase workup might offer greater
convenience. The successful amidation of amino acids using boronic
acid catalysts or other boron-based amidation reagents has not been
reported to date. We therefore wished to explore the application of
B(OCH2CF3)3 to the coupling of a
selection of amino acids bearing commonly used nitrogen protecting
groups to determine whether the corresponding amides could be obtained
without racemization (Figure 6).
Figure 6
Coupling of acids containing
adjacent chiral centers. All reactions
were carried out at 80 °C for 15 h unless otherwise stated and
purified by solid phase workup. (a) 80 °C for 8 h; (b) 100 °C
for 24 h in a sealed tube; (c) er measured after conversion to the N-benzoyl amide derivative; (d) 100 °C for 8 h in a
sealed tube; (e) 80 °C for 5 h.
The
coupling of a range of protected amino acids with benzylamine proceeded
in good yield (6a–6e) including both
Boc (6a–6d) and Cbz (6e) protected examples. In most cases no significant racemization was
observed (6a, 6b, 6d). Where
small levels of racemization were observed, this could be reduced
significantly by decreasing the reaction time, albeit at the expense
of product yield (6b, 6c). The synthesis
of prolinamide 6d is notable, as derivatives of this
compound have been used as organocatalysts in a variety of reactions.[17] Dipeptides (6f, 6g) could also be obtained in moderate yield, by coupling of two suitably
protected amino acids with no observable formation of diastereomeric
products. Dipeptides 6f and 6g have previously
been synthesized via carbodiimide coupling,[18−21] but purification by aqueous workup,
recrystallization or chromatography was required.Pleasingly,
amino acids could also be coupled with cyclic secondary
amines (6h–6l) in reasonable yield,
and these couplings also proceeded with relatively low levels of racemization.
The synthesis of amides6h–6j has
been reported using a range of different coupling reagents,[22−30] but the enantiomeric purity of the products was not directly determined
in any of these cases. The preparation of benzamides 6k and 6l has never been previously reported. The preparation
of N-benzylamide 6m was achieved in
excellent yield with negligible racemization. The coupling of amino
acids with acyclic secondary amines was unsuccessful (6n, 6o).The above reactions serve to illustrate
the scope of the B(OCH2CF3)3 reagent
for the coupling of acids
bearing adjacent chiral centers. Commonly used nitrogen protecting
groups (Boc, Cbz) are tolerated under the reaction conditions, and
very little racemization is observed in many cases despite the high
temperatures employed. Where racemization does occur, it can be reduced
significantly by shortening the reaction time. Notably, the coupling
of amino acids with secondary amines using conventional coupling reagents
is often a considerable challenge, and an aqueous work up and/or chromatographic
purification is generally required. Our method therefore offers a
potentially valuable approach to tertiary amino acid amides, as it
furnishes pure products in reasonable yield with high enantiopurity,
following a simple solid phase workup.Coupling of acids containing
adjacent chiral centers. All reactions
were carried out at 80 °C for 15 h unless otherwise stated and
purified by solid phase workup. (a) 80 °C for 8 h; (b) 100 °C
for 24 h in a sealed tube; (c) er measured after conversion to the N-benzoyl amide derivative; (d) 100 °C for 8 h in a
sealed tube; (e) 80 °C for 5 h.
Transamidation of DMF using B(OCH2CF3)3
In our preliminary communication, we reported the
transamidation of a limited selection of primary amides using B(OCH2CF3)3. Since this report, a number of
alternative catalysts and reagents for transamidation reactions have
been reported including hydroxylamine hydrochloride,[31] Cp2ZrCl2,[32] Cu(OAc)2,[33] PhI(OAc)2,[34] boric acid,[35] CeO2[36] and l-proline.[37] In many cases these reagents are cheap and readily available, and
the reactions have a wide substrate scope. On this basis, it therefore
seemed that the potential application of B(OCH2CF3)3 as a reagent for transamidation of primary amides is
somewhat limited. However, during our initial solvent screen for the
direct amidation of carboxylic acids, we observed that B(OCH2CF3)3 was highly effective for the transamidation
of DMF. With this in mind, we opted to investigate the scope of this
reaction. Recent literature methods for the N-formylation
of amines include HCONH2/NaOMe,[38] HCONH2/NH2OH·HCl,[31] HCONH2/Cp2ZrCl2,[32] HCO2H in the presence of protic ionic
liquids,[39] and HCO2H/HCO2Na.[40] All of these methods require
high temperatures, anhydrous conditions and purification by column
chromatography. The direct transamidation of DMF has recently been
achieved with boric acid,[35] PhI(OAc)2,[34]l-proline,[37] and imidazole,[41] but
at high temperatures,[34,35] with extended reaction times,[34,35,41] and/or with purification by column
chromatography.[41] We therefore anticipated
that B(OCH2CF3)3-mediated transamidation
of DMF may provide a useful formylation method, especially if the
products could be readily purified by solid phase workup.The
formylation of benzylamine was used as a model for optimization (Table 2). First, we confirmed that the background reaction,
observed when the amine was heated in DMF at 100 °C in the absence
of B(OCH2CF3)3, was negligible (entry
1). In neat DMF with 2 equiv of B(OCH2CF3)3, a 41% yield of formamide was obtained (entry 2). Surprisingly,
the reaction was more effective with small quantities of DMF in acetonitrile
as solvent (entries 3–9). Although reasonable yields were obtained
with as little as 1 equiv of DMF (entry 3), the use of 10 equiv was
found to be optimal (entry 8). The reaction temperature could be lowered
to 80 °C without a detrimental effect on yield, and the pure
formamide could be obtained in good yield after solid phase workup
and evaporation (entry 10). Formylation of benzylamine could also
be achieved with similar efficiency using formamide (88% yield) and N-methylformamide (94%). However, DMF is considerably cheaper
and easier to separate from the formamide product than these alternative
formyl donors.
Table 2
Formylation Optimizationa
entry
DMF [equiv]
yield [%]b
1
neatc
11
2
neatd
41
3
1
60
4
2
62
5
3
66
6
4
72
7
5
74
8
10
98
9
15
92
10e
10
95
Product isolated by solid phase
workup followed by column chromatography unless otherwise stated.
Isolated yield.
DMF (0.5 M) as solvent, no B(OCH2CF3)3.
DMF (0.5 M) as solvent.
80 °C, solid phase workup followed
by evaporation of DMF, no column chromatography required.
Product isolated by solid phase
workup followed by column chromatography unless otherwise stated.Isolated yield.DMF (0.5 M) as solvent, no B(OCH2CF3)3.DMF (0.5 M) as solvent.80 °C, solid phase workup followed
by evaporation of DMF, no column chromatography required.The scope of this reaction was evaluated
on a range of amines (Table 3). Aromatic and
aliphatic amines underwent formylation
in moderate to excellent yield (7a–7f). Amines with α-substituents such as α-methylbenzylamine
gave the corresponding formamide in excellent yield (7d). The volatile N-butylformamide (7g) could be obtained in good yield as calculated by 1H
NMR, but a significant loss of the product was observed during isolation.
Less nucleophilic systems such as aniline and related derivatives
(7h, 7i) were formylated in relatively low
yield. Secondary amines (7i, 7j) could also
be formylated, although higher temperatures were required to obtain
better yields.
Table 3
Formylation of Amines with DMF
Isolated yield.
Yield measured using mesitylene
as an internal standard.
100 °C for 5 h in a sealed
tube.
Isolated yield.Yield measured using mesitylene
as an internal standard.100 °C for 5 h in a sealed
tube.
Conclusion
A convenient
synthesis of B(OCH2CF3)3 from readily
available bulk chemicals has been reported,
and the full scope of its application in direct amidation reactions
has been explored. A wide range of acids and amines containing varying
functionalities can be successfully used in B(OCH2CF3)3-mediated amidation reactions, and the pure amide
products can be isolated following an operationally simple solid phase
workup procedure using commercially available resins, avoiding the
need for aqueous workup or chromatographic purification. The amidation
of a series of N-protected amino acids with both
primary and secondary amines has been successfully demonstrated, and
the products were obtained with high enantiopurity. The formylation
of a series of primary and secondary amines via transamidation of
DMF was also successfully achieved.
Experimental
Section
General Methods
All solvents and chemicals were used
as supplied unless otherwise indicated. Reactions in MeCN at 100 °C
were performed in a sealed (screw cap) carousel tube. All resins were
washed with CH2Cl2 and dried under a vacuum
prior to use. Column chromatography was carried out using silica gel,
and analytical thin layer chromatography was carried out using aluminum-backed
silica plates. Components were visualized using combinations of UV
(254 nm) and potassium permanganate. [α] values are given in 10–1 deg cm2 g–1, concentration (c) in g per
100 mL. 1H NMR spectra were recorded at 300, 400, 500,
or 600 MHz in the stated solvent using residual protic solvent CDCl3 (δ = 7.26 ppm, s), DMSO (δ = 2.56 ppm, qn) or
MeOD (δ = 4.87, s and 3.31, quintet) as the internal standard.
Chemical shifts are quoted in ppm using the following abbreviations:
s, singlet; d, doublet; t, triplet; q, quartet; qn, quintet; m, multiplet;
br, broad or a combination of these. The coupling constants (J) are measured in Hertz. 13C NMR spectra were
recorded at 75, 100, 125, or 150 MHz in the stated solvent using the
central reference of CDCl3 (δ = 77.0 ppm, t), DMSO
(δ = 39.52 ppm, septet) or MeOD (δ = 49.15 ppm, septet)
as the internal standard. Chemical shifts are reported to the nearest
0.1 ppm. Mass spectrometry data were collected on either TOF or magnetic
sector analyzers. The ionization method is reported in the experimental
data. The data for amides 2a, 2d, 2e, 2g, 2h, 3j, 3l, 3o, 3q, 3r, 4a, 4b, 4d, 4f and 6b was reported in our preliminary communication.[13]
Tris-(2,2,2-trifluoroethyl) borate[13]
25 g Scale
A suspension of B2O3 (25.6 g, 0.37 mol) in 2,2,2-trifluoroethanol
(53 mL, 0.73 mol) was
stirred at 80 °C for 8 h. The reaction mixture was then filtered
to remove excess boric anhydride. The filtrate was purified by distillation
to give B(OCH2CF3)3 as a clear liquid
(36.0 g, 117 mmol, 48%).
50 g Scale (With CF3CH2OH Recovery)
A suspension of B2O3 (48.1
g, 0.69 mol) in
2,2,2-trifluoroethanol (100 mL, 1.37 mol) was stirred at 80 °C
for 24 h. The reaction mixture was then filtered to remove excess
boric anhydride. The filtrate was purified by distillation to give
B(OCH2CF3)3 as a clear liquid (46.3
g, 150 mmol, 33%). 2,2,2-Trifluoroethanol (38.4 g, 28%) was recovered
during the distillation: bp 122–125 °C (760 Torr) [lit.[13] 120–123 °C (760 Torr)]; νmax (film/cm–1) 3165 (C–H), 1441 (C–F),
1376 (B–O), 1156 (C–O); δH (300 MHz,
CDCl3) 4.24 (q, J 8.3 6H); δC (75 MHz, CDCl3) 61.8 (q, J 36.5),
123.2 (q, J 276); δF (282 MHz, CDCl3) −77.06; Found (CI) [M + H]+ 309.0334 C6H7O3F9B, requires 309.0344.
General Procedure for Amidation of Carboxylic acids
All
reactions were performed on a 1 mmol scale. B(OCH2CF3)3 (2.0 mmol, 2 equiv) was added to a solution
of acid (1.0 mmol, 1 equiv) and amine (1.0 mmol, 1 equiv) in MeCN
(2 mL, 0.5 M). The reaction mixture was stirred at the indicated temperature
(80 °C, or 100 °C in a sealed tube) for the indicated time
(5–24 h).
Solid Phase Workup
After the indicated
time, the reaction
mixture was diluted with CH2Cl2 or EtOAc (3
mL) and water (0.5 mL). Amberlyst A-26(OH) (150 mg), Amberlyst 15
(150 mg) and Amberlite IRA743 (150 mg) were added to the reaction
mixture, and it was stirred for 30 min. MgSO4 was added
to the reaction mixture, which was then filtered, the solids were
washed three times with CH2Cl2 or EtOAc, and
the filtrate was concentrated in vacuo to yield the amide product.For amides 2i, 2j, 2t, 2u and 4e, Amberlyst 15 was not used. In these
cases, the product was separated from any excess amine by column chromatography.
Aqueous Workup Procedure
After the reaction was complete,
the solvent was removed under reduced pressure. The residue was redissolved
in CH2Cl2 (15 mL) and washed with aqueous solutions
of NaHCO3 (15 mL, 1 M) and HCl (15 mL, 1 M), dried over
MgSO4, filtered and concentrated under reduced pressure
to give the amide product.
General Procedure for the
Formylation of Amines with DMF
All reactions were performed
on a 1 mmol scale. B(OCH2CF3)3 (2.0
mmol, 2 equiv) was added to a solution
of amine (1.0 mmol, 1 equiv) and DMF (10.0 mmol, 10 equiv) in MeCN
(2 mL, 0.5 M). The reaction mixture was stirred at 80 °C for
5 h. After 5 h, the reaction mixture was diluted with CH2Cl2 or EtOAc (3 mL) and water (0.5 mL). Amberlyst 15 (150
mg) and Amberlite IRA743 (150 mg) were added to the reaction mixture,
and it was stirred for 30 min. The reaction mixture was dried over
MgSO4 and then filtered, the solids were washed three times
with CH2Cl2 or EtOAc, and the filtrate was diluted
with toluene (10 mL) and then concentrated in vacuo repeatedly (5
times) to yield the clean product.
B(OCH2CF3)3 (621.8 mg,
2.02 mmol, 2 equiv) was added to a solution of phenylene diacetic
acid (192 mg, 0.99 mmol, 1 equiv) and benzylamine (0.11 mL, 1.01 mmol,
1 equiv) in MeCN (2 mL, 0.5 M). The reaction mixture was stirred at
80 °C for 5 h. After 5 h the solvent was removed in vacuo, and
the residue was diluted in Et2O (20 mL), washed with NaHCO3 (20 mL, 1 M), and extracted with Et2O (3 ×
20 mL). The aqueous layer was acidifed with HCl (1 M) and extracted
with CH2Cl2 (3 × 20 mL). The organic layer
was dried over MgSO4 and concentrated in vacuo to yield
the product as a white solid (146 mg, 0.52 mmol, 52%): mp 163–166
°C (CH2Cl2); νmax (solid/cm–1) 3284 (N–H/O–H), 3030, 3060 (C–H),
1699 (C=O), 1632 (C=O); δH (600 MHz,
DMSO-d6) 3.45 (s, 2H), 3.53 (s, 2H), 4.26
(d, J 6.0, 2H), 7.16–7.19 (m, 2H), 7.20–7.25
(m, 5H), 7.29–7.32 (m, 2H), 8.55 (br t, J 5.6,
1H), 12.31 (br s, 1H); δC (150 MHz, DMSO-d6) 40.3, 42.0, 42,2, 126.8, 127.3, 128.3, 128.9,
129.3, 133.1, 134.7, 139.5, 170.2, 172.8; Found (EI) [M + H]+ 284.1279 C17H18O3N, requires 284.1287.
Authors: Esther C Y Woon; Marina Demetriades; Eleanor A L Bagg; WeiShen Aik; Svetlana M Krylova; Jerome H Y Ma; MunChiang Chan; Louise J Walport; David W Wegman; Kevin N Dack; Michael A McDonough; Sergey N Krylov; Christopher J Schofield Journal: J Med Chem Date: 2012-02-22 Impact factor: 7.446
Authors: Sergey Arkhipenko; Marco T Sabatini; Andrei S Batsanov; Valerija Karaluka; Tom D Sheppard; Henry S Rzepa; Andrew Whiting Journal: Chem Sci Date: 2018-01-02 Impact factor: 9.825
Authors: Marco T Sabatini; Valerija Karaluka; Rachel M Lanigan; Lee T Boulton; Matthew Badland; Tom D Sheppard Journal: Chemistry Date: 2018-04-30 Impact factor: 5.236
Authors: Bojana R Vasiljević; Edward T Petri; Sofija S Bekić; Andjelka S Ćelić; Ljubica M Grbović; Ksenija J Pavlović Journal: RSC Med Chem Date: 2020-11-19