Literature DB >> 28759388

Genomic approaches to accelerate cancer interception.

Jennifer Beane1, Joshua D Campbell1, Julian Lel1, Jessica Vick1, Avrum Spira2.   

Abstract

Although major advances have been reported in the last decade in the treatment of late-stage cancer with targeted and immune-based therapies, there is a crucial unmet need to develop new approaches to improve the prevention and early detection of cancer. Advances in genomics and computational biology offer unprecedented opportunities to understand the earliest molecular events associated with carcinogenesis, enabling novel strategies to intercept the development of invasive cancers. This Series paper will highlight emerging big data genomic approaches with the potential to accelerate advances in cancer prevention, screening, and early detection across various tumour types, and the challenges inherent in the development of these tools for clinical use. Through coordinated multicentre consortia, these genomic approaches are likely to transform the landscape of cancer interception in the coming years.
Copyright © 2017 Elsevier Ltd. All rights reserved.

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Year:  2017        PMID: 28759388      PMCID: PMC6020676          DOI: 10.1016/S1470-2045(17)30373-X

Source DB:  PubMed          Journal:  Lancet Oncol        ISSN: 1470-2045            Impact factor:   41.316


  93 in total

Review 1.  A compendium of genome-wide associations for cancer: critical synopsis and reappraisal.

Authors:  John P A Ioannidis; Peter Castaldi; Evangelos Evangelou
Journal:  J Natl Cancer Inst       Date:  2010-05-26       Impact factor: 13.506

Review 2.  Applying what we know to accelerate cancer prevention.

Authors:  Graham A Colditz; Kathleen Y Wolin; Sarah Gehlert
Journal:  Sci Transl Med       Date:  2012-03-28       Impact factor: 17.956

3.  Detection of circulating tumor DNA in early- and late-stage human malignancies.

Authors:  Chetan Bettegowda; Mark Sausen; Rebecca J Leary; Isaac Kinde; Yuxuan Wang; Nishant Agrawal; Bjarne R Bartlett; Hao Wang; Brandon Luber; Rhoda M Alani; Emmanuel S Antonarakis; Nilofer S Azad; Alberto Bardelli; Henry Brem; John L Cameron; Clarence C Lee; Leslie A Fecher; Gary L Gallia; Peter Gibbs; Dung Le; Robert L Giuntoli; Michael Goggins; Michael D Hogarty; Matthias Holdhoff; Seung-Mo Hong; Yuchen Jiao; Hartmut H Juhl; Jenny J Kim; Giulia Siravegna; Daniel A Laheru; Calogero Lauricella; Michael Lim; Evan J Lipson; Suely Kazue Nagahashi Marie; George J Netto; Kelly S Oliner; Alessandro Olivi; Louise Olsson; Gregory J Riggins; Andrea Sartore-Bianchi; Kerstin Schmidt; le-Ming Shih; Sueli Mieko Oba-Shinjo; Salvatore Siena; Dan Theodorescu; Jeanne Tie; Timothy T Harkins; Silvio Veronese; Tian-Li Wang; Jon D Weingart; Christopher L Wolfgang; Laura D Wood; Dongmei Xing; Ralph H Hruban; Jian Wu; Peter J Allen; C Max Schmidt; Michael A Choti; Victor E Velculescu; Kenneth W Kinzler; Bert Vogelstein; Nickolas Papadopoulos; Luis A Diaz
Journal:  Sci Transl Med       Date:  2014-02-19       Impact factor: 17.956

Review 4.  Review of the Gene-Environment Interaction Literature in Cancer: What Do We Know?

Authors:  Naoko I Simonds; Armen A Ghazarian; Camilla B Pimentel; Sheri D Schully; Gary L Ellison; Elizabeth M Gillanders; Leah E Mechanic
Journal:  Genet Epidemiol       Date:  2016-04-07       Impact factor: 2.135

5.  Going with the flow: from circulating tumor cells to DNA.

Authors:  Francois-Clement Bidard; Britta Weigelt; Jorge S Reis-Filho
Journal:  Sci Transl Med       Date:  2013-10-16       Impact factor: 17.956

6.  Multitarget stool DNA testing for colorectal-cancer screening.

Authors:  Thomas F Imperiale; David F Ransohoff; Steven H Itzkowitz; Theodore R Levin; Philip Lavin; Graham P Lidgard; David A Ahlquist; Barry M Berger
Journal:  N Engl J Med       Date:  2014-03-19       Impact factor: 91.245

7.  Tumor evolution. High burden and pervasive positive selection of somatic mutations in normal human skin.

Authors:  Iñigo Martincorena; Amit Roshan; Moritz Gerstung; Peter Ellis; Peter Van Loo; Stuart McLaren; David C Wedge; Anthony Fullam; Ludmil B Alexandrov; Jose M Tubio; Lucy Stebbings; Andrew Menzies; Sara Widaa; Michael R Stratton; Philip H Jones; Peter J Campbell
Journal:  Science       Date:  2015-05-22       Impact factor: 47.728

8.  A meta-analysis of genome-wide association studies to identify prostate cancer susceptibility loci associated with aggressive and non-aggressive disease.

Authors:  Ali Amin Al Olama; Zsofia Kote-Jarai; Fredrick R Schumacher; Fredrik Wiklund; Sonja I Berndt; Sara Benlloch; Graham G Giles; Gianluca Severi; David E Neal; Freddie C Hamdy; Jenny L Donovan; David J Hunter; Brian E Henderson; Michael J Thun; Michael Gaziano; Edward L Giovannucci; Afshan Siddiq; Ruth C Travis; David G Cox; Federico Canzian; Elio Riboli; Timothy J Key; Gerald Andriole; Demetrius Albanes; Richard B Hayes; Johanna Schleutker; Anssi Auvinen; Teuvo L J Tammela; Maren Weischer; Janet L Stanford; Elaine A Ostrander; Cezary Cybulski; Jan Lubinski; Stephen N Thibodeau; Daniel J Schaid; Karina D Sorensen; Jyotsna Batra; Judith A Clements; Suzanne Chambers; Joanne Aitken; Robert A Gardiner; Christiane Maier; Walther Vogel; Thilo Dörk; Hermann Brenner; Tomonori Habuchi; Sue Ingles; Esther M John; Joanne L Dickinson; Lisa Cannon-Albright; Manuel R Teixeira; Radka Kaneva; Hong-Wei Zhang; Yong-Jie Lu; Jong Y Park; Kathleen A Cooney; Kenneth R Muir; Daniel A Leongamornlert; Edward Saunders; Malgorzata Tymrakiewicz; Nadiya Mahmud; Michelle Guy; Koveela Govindasami; Lynne T O'Brien; Rosemary A Wilkinson; Amanda L Hall; Emma J Sawyer; Tokhir Dadaev; Jonathan Morrison; David P Dearnaley; Alan Horwich; Robert A Huddart; Vincent S Khoo; Christopher C Parker; Nicholas Van As; Christopher J Woodhouse; Alan Thompson; Tim Dudderidge; Chris Ogden; Colin S Cooper; Artitaya Lophatonanon; Melissa C Southey; John L Hopper; Dallas English; Jarmo Virtamo; Loic Le Marchand; Daniele Campa; Rudolf Kaaks; Sara Lindstrom; W Ryan Diver; Susan Gapstur; Meredith Yeager; Angela Cox; Mariana C Stern; Roman Corral; Markus Aly; William Isaacs; Jan Adolfsson; Jianfeng Xu; S Lilly Zheng; Tiina Wahlfors; Kimmo Taari; Paula Kujala; Peter Klarskov; Børge G Nordestgaard; M Andreas Røder; Ruth Frikke-Schmidt; Stig E Bojesen; Liesel M FitzGerald; Suzanne Kolb; Erika M Kwon; Danielle M Karyadi; Torben Falck Orntoft; Michael Borre; Antje Rinckleb; Manuel Luedeke; Kathleen Herkommer; Andreas Meyer; Jürgen Serth; James R Marthick; Briony Patterson; Dominika Wokolorczyk; Amanda Spurdle; Felicity Lose; Shannon K McDonnell; Amit D Joshi; Ahva Shahabi; Pedro Pinto; Joana Santos; Ana Ray; Thomas A Sellers; Hui-Yi Lin; Robert A Stephenson; Craig Teerlink; Heiko Muller; Dietrich Rothenbacher; Norihiko Tsuchiya; Shintaro Narita; Guang-Wen Cao; Chavdar Slavov; Vanio Mitev; Stephen Chanock; Henrik Gronberg; Christopher A Haiman; Peter Kraft; Douglas F Easton; Rosalind A Eeles
Journal:  Hum Mol Genet       Date:  2012-10-12       Impact factor: 6.150

9.  ASPirin Intervention for the REDuction of colorectal cancer risk (ASPIRED): a study protocol for a randomized controlled trial.

Authors:  David A Drew; Samantha M Chin; Katherine K Gilpin; Melanie Parziale; Emily Pond; Madeline M Schuck; Kathleen Stewart; Meaghan Flagg; Crystal A Rawlings; Vadim Backman; Peter J Carolan; Daniel C Chung; Francis P Colizzo; Matthew Freedman; Manish Gala; John J Garber; Curtis Huttenhower; Dmitriy Kedrin; Hamed Khalili; Douglas S Kwon; Sanford D Markowitz; Ginger L Milne; Norman S Nishioka; James M Richter; Hemant K Roy; Kyle Staller; Molin Wang; Andrew T Chan
Journal:  Trials       Date:  2017-02-01       Impact factor: 2.279

10.  Circulating tumor cells predict survival in early average-to-high risk breast cancer patients.

Authors:  Brigitte Rack; Christian Schindlbeck; Julia Jückstock; Ulrich Andergassen; Philip Hepp; Thomas Zwingers; Thomas W P Friedl; Ralf Lorenz; Hans Tesch; Peter A Fasching; Tanja Fehm; Andreas Schneeweiss; Werner Lichtenegger; Matthias W Beckmann; Klaus Friese; Klaus Pantel; Wolfgang Janni
Journal:  J Natl Cancer Inst       Date:  2014-05-15       Impact factor: 13.506

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  16 in total

Review 1.  Defining Impaired Respiratory Health. A Paradigm Shift for Pulmonary Medicine.

Authors:  Paul A Reyfman; George R Washko; Mark T Dransfield; Avrum Spira; MeiLan K Han; Ravi Kalhan
Journal:  Am J Respir Crit Care Med       Date:  2018-08-15       Impact factor: 21.405

2.  Constructing a novel prognostic signature of tumor driver genes for breast cancer.

Authors:  Liqiang Zhou; Yali Yi; Chuan Liu; Zhiqing Chen
Journal:  Am J Transl Res       Date:  2022-07-15       Impact factor: 3.940

3.  Considerations of biomarker application for cancer continuum in the era of precision medicine.

Authors:  Rayjean J Hung; Elham Khodayari Moez; Shana J Kim; Sanjeev Budhathoki; Jennifer D Brooks
Journal:  Curr Epidemiol Rep       Date:  2022-07-09

4.  Female-specific association among I, J and K mitochondrial genetic haplogroups and cancer: A longitudinal cohort study.

Authors:  Claudio Luchini; Alessia Nottegar; Alberto Vaona; Brendon Stubbs; Jacopo Demurtas; Stefania Maggi; Nicola Veronese
Journal:  Cancer Genet       Date:  2018-04-11

Review 5.  When Tissue is an Issue the Liquid Biopsy is Nonissue: A Review.

Authors:  July Rodríguez; Jenny Avila; Christian Rolfo; Alejandro Ruíz-Patiño; Alessandro Russo; Luisa Ricaurte; Camila Ordóñez-Reyes; Oscar Arrieta; Zyanya Lucia Zatarain-Barrón; Gonzalo Recondo; Andrés F Cardona
Journal:  Oncol Ther       Date:  2021-03-10

6.  Era of the Fourth Industrial Revolution and the Urologists' Journey to Navigating Big Omics Data.

Authors:  Jayoung Kim
Journal:  Int Neurourol J       Date:  2018-07-31       Impact factor: 3.038

7.  Molecular subtyping reveals immune alterations associated with progression of bronchial premalignant lesions.

Authors:  Jennifer E Beane; Sarah A Mazzilli; Joshua D Campbell; Grant Duclos; Kostyantyn Krysan; Christopher Moy; Catalina Perdomo; Michael Schaffer; Gang Liu; Sherry Zhang; Hanqiao Liu; Jessica Vick; Samjot S Dhillon; Suso J Platero; Steven M Dubinett; Christopher Stevenson; Mary E Reid; Marc E Lenburg; Avrum E Spira
Journal:  Nat Commun       Date:  2019-04-23       Impact factor: 14.919

8.  Cancer Classification at the Crossroads.

Authors:  Antonino Carbone
Journal:  Cancers (Basel)       Date:  2020-04-15       Impact factor: 6.639

Review 9.  Bio-Nanocarriers for Lung Cancer Management: Befriending the Barriers.

Authors:  Shruti Rawal; Mayur Patel
Journal:  Nanomicro Lett       Date:  2021-06-12

10.  Whole exome sequencing identifies mTOR and KEAP1 as potential targets for radiosensitization of HNSCC cells refractory to EGFR and β1 integrin inhibition.

Authors:  Erik Klapproth; Ellen Dickreuter; Falk Zakrzewski; Michael Seifert; Andreas Petzold; Andreas Dahl; Evelin Schröck; Barbara Klink; Nils Cordes
Journal:  Oncotarget       Date:  2018-04-06
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