| Literature DB >> 28757675 |
Liliya Skvortsova1, Anastasia Perfelyeva1, Elmira Khussainova1, Alma Mansharipova2, Henry Jay Forman3, Leyla Djansugurova1.
Abstract
BACKGROUND: Glutamate cysteine ligase (GCL) is a rate-limiting enzyme in synthesis of glutathione. Evidence suggests that genetic variations in the promoter region of genes coding a catalytic subunit (GCLC -129T/C) and a modifier subunit (GCLM -588C/T) of GCL have a functional impact on their transcriptional activity and were associated with various disorders. Hence, we hypothesize whether these two polymorphic variants of GCLM and GCLC genes are associated with the risk of ischemic heart disease (IHD) development in the population of Kazakhstan.Entities:
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Year: 2017 PMID: 28757675 PMCID: PMC5516751 DOI: 10.1155/2017/4209257
Source DB: PubMed Journal: Dis Markers ISSN: 0278-0240 Impact factor: 3.434
Comparison of IHD patient group and control subjects.
| Characteristics | IHD group | Control group |
|
| |
|---|---|---|---|---|---|
|
| 360 | 341 | |||
| Age (y) | 1923–1970 | 1921–1970 | 0.51 | 0.699 | |
| Gender, | Male | 91 (25.27) | 109 (31.96) | 1.628 | 0.350 |
| Female | 269(74.72) | 232 (68.03) | 1.042 | 0.486 | |
| Ethnicity, | Kazakhs | 230 (63.88) | 237 (69.5) | 0.908 | 0.530 |
| Other Asians | 28 (8.21) | 33 (9.68) | 0.840 | 0.555 | |
| Russians | 102 (28.32) | 71 (20.82) | 1.925 | 0.305 | |
| Smoking status, | Smokers | 41(11.39) | 57 (16.71) | 1.796 | 0.323 |
| Nonsmokers | 319 (88.61) | 284 (83.28) | 0.758 | 0.587 | |
| Total cholesterol (mmol/l) | >5.02 (5.47 ± 0.09) | <5.02 (4.01 ± 0.06) | 13.498 | 0.047 | |
| Blood pressure (mmHg) | >140/90 | 120/60 | — | — | |
There were no statistically significant differences in age, gender, and smoking status between the control and experimental groups (p > 0.05 for all characteristics).
Odds ratios (ORs) and 95% confidence intervals (CIs) for GCLM (-588C/T) and GCLC (-129T/C) genes in studied general mixed groups.
| Gene polymorphism | Genotype | Controls | IHD patients | OR (95% CI) |
|
|---|---|---|---|---|---|
| GCLM (-588C/T) | CC | 250 | 229 | 0.64 (0.46–0.88) | 0.009 |
| CT | 87 | 119 | 1.44 (1.04–2.00) | ||
| TT | 4 | 12 |
| ||
| GCLM (-588C/T) dominant model | CC + CT | 337 | 348 | 0.34 (0.11–1.08) | 0.05 |
| TT | 4 | 12 | 2.91 (0.93–9.10) | ||
| GCLM (-588C/T) receive model | CC | 250 | 229 | 0.64 (0.46–0.88) | 0.006 |
| CT + TT | 91 | 131 | 1.57 (1.14–2.17) | ||
| GCLC (-129T/C) | CC | 268 | 257 | 0.68 (0.48–0.96) | 0.03 |
| CT | 70 | 93 | 1.35 (0.95–1.92) | ||
| TT | 3 | 10 |
| ||
| GCLC (-129T/C) dominant model | CC + CT | 338 | 350 | 0.31 (0.08–1.14) | 0.06 |
| TT | 3 | 10 | 3.22 (0.88–11.80) | ||
| GCLC (-129T/C) receive model | CC | 268 | 257 | 0.68 (048–0.96) | 0.03 |
| CT + TT | 73 | 103 | 1.47 (1.04–2.08) |
Odds ratios (ORs) and 95% confidence intervals (CIs) for GCLM (-588C/T) and GCLC (-129T/C) genes based on Kazakh and Russian ethnicity (general inheritance model).
| Groups | Genotypes | Case/control, | OR (95% CI) |
|
|
|---|---|---|---|---|---|
|
| |||||
| Ethnicity | |||||
| Kazakh | CC | 156/180 | 0.67 (0.44–1.00) | 6.211 | 0.04 |
| CT | 66/55 | 1.33 (0.88–2.02) | |||
| TT | 8/2 |
| |||
| Russian | CC | 60/48 | 0.68 (0.36–1.29) | 1.388 | 0.5 |
| CT | 38/21 | 1.41 (0.74–2.70) | |||
| TT | 4/2 | 1.41 (0.25–7.90) | |||
|
| |||||
| Kazakh | CC | 168/191 | 0.65 (0.42–1.01) | 6.660 | 0.04 |
| CT | 53/44 | 1.31 (0.84–2.06) | |||
| TT | 9/2 |
| |||
| Russian | CC | 66/49 | 0.82 (0.43–1.57) | 0.473 | 0.8 |
| CT | 35/21 | 1.24 (0.65–2.39) | |||
| TT | 1/1 | 0.69 (0.04–11.27) | |||
Allele frequencies of GCLM (-588C/T) and GCLC (-129T/C) promoter polymorphism genes in Kazakhstan population (controls) and other earlier studied Asian and European populations.
| Polymorphism | Alleles | Frequency of alleles | ||
|---|---|---|---|---|
| Control cohort (Kazakhstan population) | Data from different sources | |||
| Asian populations | European populations | |||
| GCLM (-588C/T) | C | 0.861 | 0.836–0.906 [ | 0.80–0.847, [ |
| T | 0.139 | 0.094–0.164 [ | 0.160–0.20 [ | |
| GCLC (-129T/C) | C | 0.889 | 0.911 [ | 0.929–0.931 [ |
| T | 0.111 | 0.089 [ | 0.069–0.071 [ | |