Literature DB >> 28756860

A quenched-flow system for measuring heterogeneous enzyme kinetics with sub-second time resolution.

Johan P Olsen1, Jeppe Kari1, Kim Borch2, Peter Westh3.   

Abstract

Even though many enzyme processes occur at the interface of an insoluble substrate, these reactions are generally much less studied than homogenous enzyme reactions in the aqueous bulk. Interfacial (or heterogeneous) enzyme reactions involve several reaction steps, and the established experimental approach to elucidate multi-step reactions is transient (or pre steady-state) kinetics. A key requirement for pre steady-state measurements is good time resolution, and while this has been amply achieved in different commercial instruments, they are generally not applicable to precipitating suspensions of insoluble substrate. Perhaps for this reason, transient kinetics has rarely been reported for heterogeneous enzyme reactions. Here, we describe a quenched-flow system using peristaltic pumps and stirred substrate suspensions with a dead time below 100ms. The general performance was verified by alkali catalyzed hydrolysis of 2,4-dinitrophenyl acetate (DNPA), and the applicability to heterogeneous reactions was documented by two cellulases (Cel7A and Cel7B) acting on suspensions of microcrystalline cellulose (Avicel) at different loads up to 15g/l. The results showed distinctive differences between the two enzymes. In particular, we found that endo-lytic Cel7B combined very quickly with the substrate and reached the maximal activity within the dead-time of the instrument. Conversely, exo-lytic Cel7A showed a much slower initiation with maximal activity after 5-8s and a 10-fold lower turnover. We suggest that the instrument may provide an important tool in attempts to elucidate the mechanism of cellulases and other enzymes' action on insoluble substrate.
Copyright © 2017 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Burst phase; Cellobiohydrolase; Endoglucanase; Insoluble substrate; Pre-steady state kinetics; Transient kinetics

Mesh:

Substances:

Year:  2017        PMID: 28756860     DOI: 10.1016/j.enzmictec.2017.06.009

Source DB:  PubMed          Journal:  Enzyme Microb Technol        ISSN: 0141-0229            Impact factor:   3.493


  2 in total

1.  Systematic deletions in the cellobiohydrolase (CBH) Cel7A from the fungus Trichoderma reesei reveal flexible loops critical for CBH activity.

Authors:  Corinna Schiano-di-Cola; Nanna Røjel; Kenneth Jensen; Jeppe Kari; Trine Holst Sørensen; Kim Borch; Peter Westh
Journal:  J Biol Chem       Date:  2018-12-11       Impact factor: 5.157

2.  Modeling the activity burst in the initial phase of cellulose hydrolysis by the processive cellobiohydrolase Cel7A.

Authors:  Zdeneˇk Petrášek; Manuel Eibinger; Bernd Nidetzky
Journal:  Biotechnol Bioeng       Date:  2019-01-08       Impact factor: 4.530

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.