Literature DB >> 28753302

Evidence for a 1,3-Dipolar Cyclo-addition Mechanism in the Decarboxylation of Phenylacrylic Acids Catalyzed by Ferulic Acid Decarboxylase.

Kyle L Ferguson1, Joseph D Eschweiler1, Brandon T Ruotolo1, E Neil G Marsh1,2.   

Abstract

Ferulic acid decarboxylase catalyzes the decarboxylation of phenylacrylic acid using a newly identified cofactor, prenylated flavin mononucleotide (prFMN). The proposed mechanism involves the formation of a putative pentacyclic intermediate formed by a 1,3 dipolar cyclo-addition of prFMN with the α-β double bond of the substrate, which serves to activate the substrate toward decarboxylation. However, enzyme-catalyzed 1,3 dipolar cyclo-additions are unprecedented and other mechanisms are plausible. Here we describe the use of a mechanism-based inhibitor, 2-fluoro-2-nitrovinylbenzene, to trap the putative cyclo-addition intermediate, thereby demonstrating that prFMN can function as a dipole in a 1,3 dipolar cyclo-addition reaction as the initial step in a novel type of enzymatic reaction.

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Year:  2017        PMID: 28753302     DOI: 10.1021/jacs.7b05060

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  11 in total

Review 1.  The expanding world of biosynthetic pericyclases: cooperation of experiment and theory for discovery.

Authors:  Cooper S Jamieson; Masao Ohashi; Fang Liu; Yi Tang; K N Houk
Journal:  Nat Prod Rep       Date:  2019-05-22       Impact factor: 13.423

Review 2.  Bacterial terpenome.

Authors:  Jeffrey D Rudolf; Tyler A Alsup; Baofu Xu; Zining Li
Journal:  Nat Prod Rep       Date:  2021-05-26       Impact factor: 15.111

3.  The role of conserved residues in Fdc decarboxylase in prenylated flavin mononucleotide oxidative maturation, cofactor isomerization, and catalysis.

Authors:  Samuel S Bailey; Karl A P Payne; Karl Fisher; Stephen A Marshall; Matthew J Cliff; Reynard Spiess; David A Parker; Stephen E J Rigby; David Leys
Journal:  J Biol Chem       Date:  2017-12-19       Impact factor: 5.157

4.  Exploring the substrate scope of ferulic acid decarboxylase (FDC1) from Saccharomyces cerevisiae.

Authors:  Emma Zsófia Aletta Nagy; Csaba Levente Nagy; Alina Filip; Katalin Nagy; Emese Gál; Róbert Tőtős; László Poppe; Csaba Paizs; László Csaba Bencze
Journal:  Sci Rep       Date:  2019-01-24       Impact factor: 4.379

5.  The UbiX flavin prenyltransferase reaction mechanism resembles class I terpene cyclase chemistry.

Authors:  Stephen A Marshall; Karl A P Payne; Karl Fisher; Mark D White; Aisling Ní Cheallaigh; Arune Balaikaite; Stephen E J Rigby; David Leys
Journal:  Nat Commun       Date:  2019-05-29       Impact factor: 14.919

6.  Crystal structures of non-oxidative decarboxylases reveal a new mechanism of action with a catalytic dyad and structural twists.

Authors:  Matthias Zeug; Nebojsa Markovic; Cristina V Iancu; Joanna Tripp; Mislav Oreb; Jun-Yong Choe
Journal:  Sci Rep       Date:  2021-02-04       Impact factor: 4.379

7.  Toolbox for the structure-guided evolution of ferulic acid decarboxylase (FDC).

Authors:  Horia Duță; Alina Filip; Levente Csaba Nagy; Emma Zsófia Aletta Nagy; Róbert Tőtős; László Csaba Bencze
Journal:  Sci Rep       Date:  2022-03-01       Impact factor: 4.379

8.  Regioselective para-Carboxylation of Catechols with a Prenylated Flavin Dependent Decarboxylase.

Authors:  Stefan E Payer; Stephen A Marshall; Natalie Bärland; Xiang Sheng; Tamara Reiter; Andela Dordic; Georg Steinkellner; Christiane Wuensch; Susann Kaltwasser; Karl Fisher; Stephen E J Rigby; Peter Macheroux; Janet Vonck; Karl Gruber; Kurt Faber; Fahmi Himo; David Leys; Tea Pavkov-Keller; Silvia M Glueck
Journal:  Angew Chem Int Ed Engl       Date:  2017-10-02       Impact factor: 15.336

9.  Terminal Alkenes from Acrylic Acid Derivatives via Non-Oxidative Enzymatic Decarboxylation by Ferulic Acid Decarboxylases.

Authors:  Godwin A Aleku; Christoph Prause; Ruth T Bradshaw-Allen; Katharina Plasch; Silvia M Glueck; Samuel S Bailey; Karl A P Payne; David A Parker; Kurt Faber; David Leys
Journal:  ChemCatChem       Date:  2018-07-17       Impact factor: 5.686

Review 10.  N5 Is the New C4a: Biochemical Functionalization of Reduced Flavins at the N5 Position.

Authors:  Brett A Beaupre; Graham R Moran
Journal:  Front Mol Biosci       Date:  2020-10-30
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