Literature DB >> 28748478

Urine Exosome Isolation and Characterization.

Jonathan M Street1, Erik H Koritzinsky1, Deonna M Glispie1, Peter S T Yuen2.   

Abstract

Exosomes are nanometer-scale, membrane-enclosed vesicles that can potentially be used to detect nephrotoxicity, and reveal the subsequent response of the kidney. Epithelial cells of every nephron segment can contribute to the urinary exosome population, which is rich in potential biomarkers, including membrane proteins such as transporters and receptors, transcription factors, and microRNAs. These exosomal biomarkers may be up- or downregulated upon nephrotoxicant exposure. Exosome isolation is an area of ongoing research. Although faster and simpler methods have been developed, ultracentrifugation remains a mainstay for purification. A single ultracentrifugation step provides an enriched preparation suitable for biomarker discovery, and a second ultracentrifugation on a sucrose/D2O cushion provides the purest exosome preparation currently available and may be preferred for bioactivity assays. The concentration of exosomes can be determined using Nanosight Nanoparticle Tracking Analysis and their contents studied with a variety of approaches including western blots for proteins and RT-qPCR for microRNAs.

Entities:  

Keywords:  Biomarker; Exosomes; Nanosight; Nephrotoxicity; TSG101; Ultracentrifugation; Urine

Mesh:

Substances:

Year:  2017        PMID: 28748478      PMCID: PMC9374111          DOI: 10.1007/978-1-4939-7172-5_23

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  9 in total

1.  Identification and proteomic profiling of exosomes in human urine.

Authors:  Trairak Pisitkun; Rong-Fong Shen; Mark A Knepper
Journal:  Proc Natl Acad Sci U S A       Date:  2004-08-23       Impact factor: 11.205

2.  A multiplex quantitative proteomics strategy for protein biomarker studies in urinary exosomes.

Authors:  Delfin A A Raj; Immacolata Fiume; Giovambattista Capasso; Gabriella Pocsfalvi
Journal:  Kidney Int       Date:  2012-03-14       Impact factor: 10.612

3.  Isolation and purification of exosomes in urine.

Authors:  Patricia A Gonzales; Hua Zhou; Trairak Pisitkun; Nam Sun Wang; Robert A Star; Mark A Knepper; Peter S T Yuen
Journal:  Methods Mol Biol       Date:  2010

4.  Collection, storage, preservation, and normalization of human urinary exosomes for biomarker discovery.

Authors:  H Zhou; P S T Yuen; T Pisitkun; P A Gonzales; H Yasuda; J W Dear; P Gross; M A Knepper; R A Star
Journal:  Kidney Int       Date:  2006-04       Impact factor: 10.612

Review 5.  Discovery of urinary biomarkers.

Authors:  Trairak Pisitkun; Rose Johnstone; Mark A Knepper
Journal:  Mol Cell Proteomics       Date:  2006-07-12       Impact factor: 5.911

6.  Rapid isolation of urinary exosomal biomarkers using a nanomembrane ultrafiltration concentrator.

Authors:  Anita Cheruvanky; Hua Zhou; Trairak Pisitkun; Jeffrey B Kopp; Mark A Knepper; Peter S T Yuen; Robert A Star
Journal:  Am J Physiol Renal Physiol       Date:  2007-01-16

7.  Isolation and characterization of exosomes from cell culture supernatants and biological fluids.

Authors:  Clotilde Théry; Sebastian Amigorena; Graça Raposo; Aled Clayton
Journal:  Curr Protoc Cell Biol       Date:  2006-04

8.  Extracellular vesicle sizing and enumeration by nanoparticle tracking analysis.

Authors:  Chris Gardiner; Yannick J Ferreira; Rebecca A Dragovic; Christopher W G Redman; Ian L Sargent
Journal:  J Extracell Vesicles       Date:  2013-02-15

9.  How pure are your vesicles?

Authors:  Jason Webber; Aled Clayton
Journal:  J Extracell Vesicles       Date:  2013-01-10
  9 in total
  21 in total

Review 1.  Recent Advances in Experimental Models of Breast Cancer Exosome Secretion, Characterization and Function.

Authors:  Fanny A Pelissier Vatter; Serena Lucotti; Haiying Zhang
Journal:  J Mammary Gland Biol Neoplasia       Date:  2020-12-22       Impact factor: 2.673

2.  Circadian variation in the release of small extracellular vesicles can be normalized by vesicle number or TSG101.

Authors:  Erik H Koritzinsky; Jonathan M Street; Rohit R Chari; Deonna M Glispie; Tiffany R Bellomo; Angel M Aponte; Robert A Star; Peter S T Yuen
Journal:  Am J Physiol Renal Physiol       Date:  2019-08-07

Review 3.  Top 100 most-cited articles on exosomes in the field of cancer: a bibliometric analysis and evidence mapping.

Authors:  Shuzhen Shi; Ya Gao; Ming Liu; Youxiang Bu; Jiarui Wu; Jinhui Tian; Junhua Zhang
Journal:  Clin Exp Med       Date:  2020-04-07       Impact factor: 3.984

Review 4.  New treatment paradigms for ADPKD: moving towards precision medicine.

Authors:  Matthew B Lanktree; Arlene B Chapman
Journal:  Nat Rev Nephrol       Date:  2017-10-09       Impact factor: 28.314

Review 5.  Challenges in the Isolation and Proteomic Analysis of Cancer Exosomes-Implications for Translational Research.

Authors:  Jadwiga Jablonska; Monika Pietrowska; Sonja Ludwig; Stephan Lang; Basant Kumar Thakur
Journal:  Proteomes       Date:  2019-05-15

Review 6.  Exosome: A New Player in Translational Nanomedicine.

Authors:  Houssam Aheget; María Tristán-Manzano; Loubna Mazini; Marina Cortijo-Gutierrez; Pablo Galindo-Moreno; Concha Herrera; Francisco Martin; Juan Antonio Marchal; Karim Benabdellah
Journal:  J Clin Med       Date:  2020-07-26       Impact factor: 4.241

Review 7.  From tumor microenvironment communicants to biomarker discovery: Selectively packaged extracellular vesicular cargoes in pancreatic cancer.

Authors:  Song Han; Patrick Underwood; Steven J Hughes
Journal:  Cytokine Growth Factor Rev       Date:  2020-01-11       Impact factor: 7.638

Review 8.  Plasmonic Sensors for Extracellular Vesicle Analysis: From Scientific Development to Translational Research.

Authors:  Lip Ket Chin; Taehwang Son; Jae-Sang Hong; Ai-Qun Liu; Johan Skog; Cesar M Castro; Ralph Weissleder; Hakho Lee; Hyungsoon Im
Journal:  ACS Nano       Date:  2020-10-29       Impact factor: 15.881

Review 9.  Progress, opportunity, and perspective on exosome isolation - efforts for efficient exosome-based theranostics.

Authors:  Dongbin Yang; Weihong Zhang; Huanyun Zhang; Fengqiu Zhang; Lanmei Chen; Lixia Ma; Leon M Larcher; Suxiang Chen; Nan Liu; Qingxia Zhao; Phuong H L Tran; Changying Chen; Rakesh N Veedu; Tao Wang
Journal:  Theranostics       Date:  2020-02-19       Impact factor: 11.556

Review 10.  Current Knowledge and Future Perspectives on Mesenchymal Stem Cell-Derived Exosomes as a New Therapeutic Agent.

Authors:  Hyeon Su Joo; Ju Hun Suh; Hyeon Ji Lee; Eun Song Bang; Jung Min Lee
Journal:  Int J Mol Sci       Date:  2020-01-22       Impact factor: 5.923

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