Literature DB >> 17229675

Rapid isolation of urinary exosomal biomarkers using a nanomembrane ultrafiltration concentrator.

Anita Cheruvanky1, Hua Zhou, Trairak Pisitkun, Jeffrey B Kopp, Mark A Knepper, Peter S T Yuen, Robert A Star.   

Abstract

Urinary exosomes are excreted from all nephron segments and may serve as biomarkers for classifying renal diseases. Isolation of urinary exosomes by the established ultracentrifugation method has some limitations for use in a clinical laboratory. We sought a rapid and simple way to obtain urinary exosomes. We used a commercially available nanomembrane concentrator to enrich exosomes from urine by centrifugation at 3,000 g for 10-30 min. Urinary exosomal markers tumor susceptibility gene 101, aquaporin-2, neuron-specific enolase, annexin V, angiotensin-converting enzyme, and podocalyxin (PODXL) were recovered from the nanomembrane concentrator and detected by Western blotting, and typical features of urinary vesicles were found by electron microscopy. Exosomal markers were detected in as little as 0.5 ml of urine. By the nanomembrane method, exosomal proteins could be recovered from urine samples frozen at -80 degrees C or refrigerated overnight at 4 degrees C then stored at -80 degrees C. By enriching exosomes we could detect PODXL, a podocyte marker, which decreased by 71% in five male patients with focal segmental glomerulosclerosis and abundant proteinuria. We conclude that 1) use of a nanomembrane concentrator simplifies and accelerates the enrichment of urinary exosomes; and 2) the nanomembrane concentrator can concentrate exosomal proteins from clinical urine samples. This enhanced method may accelerate the translation of urinary exosomal biomarkers from bench to bedside for the diagnosis, classification, and prognostication of renal diseases.

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Year:  2007        PMID: 17229675      PMCID: PMC2271070          DOI: 10.1152/ajprenal.00434.2006

Source DB:  PubMed          Journal:  Am J Physiol Renal Physiol        ISSN: 1522-1466


  7 in total

1.  Identification and proteomic profiling of exosomes in human urine.

Authors:  Trairak Pisitkun; Rong-Fong Shen; Mark A Knepper
Journal:  Proc Natl Acad Sci U S A       Date:  2004-08-23       Impact factor: 11.205

2.  Collection, storage, preservation, and normalization of human urinary exosomes for biomarker discovery.

Authors:  H Zhou; P S T Yuen; T Pisitkun; P A Gonzales; H Yasuda; J W Dear; P Gross; M A Knepper; R A Star
Journal:  Kidney Int       Date:  2006-04       Impact factor: 10.612

Review 3.  Discovery of urinary biomarkers.

Authors:  Trairak Pisitkun; Rose Johnstone; Mark A Knepper
Journal:  Mol Cell Proteomics       Date:  2006-07-12       Impact factor: 5.911

4.  Vesicle formation during reticulocyte maturation. Association of plasma membrane activities with released vesicles (exosomes).

Authors:  R M Johnstone; M Adam; J R Hammond; L Orr; C Turbide
Journal:  J Biol Chem       Date:  1987-07-05       Impact factor: 5.157

5.  Exosomal Fetuin-A identified by proteomics: a novel urinary biomarker for detecting acute kidney injury.

Authors:  H Zhou; T Pisitkun; A Aponte; P S T Yuen; J D Hoffert; H Yasuda; X Hu; L Chawla; R-F Shen; M A Knepper; R A Star
Journal:  Kidney Int       Date:  2006-10-04       Impact factor: 10.612

Review 6.  Discovery of protein biomarkers for renal diseases.

Authors:  Stephen M Hewitt; James Dear; Robert A Star
Journal:  J Am Soc Nephrol       Date:  2004-07       Impact factor: 10.121

7.  Urinary measurement of Na+/H+ exchanger isoform 3 (NHE3) protein as new marker of tubule injury in critically ill patients with ARF.

Authors:  Damien du Cheyron; Cédric Daubin; Josiane Poggioli; Michel Ramakers; Pascal Houillier; Pierre Charbonneau; Michel Paillard
Journal:  Am J Kidney Dis       Date:  2003-09       Impact factor: 8.860

  7 in total
  140 in total

Review 1.  Microfluidic approaches for isolation, detection, and characterization of extracellular vesicles: Current status and future directions.

Authors:  Shima Gholizadeh; Mohamed Shehata Draz; Maryam Zarghooni; Amir Sanati-Nezhad; Saeid Ghavami; Hadi Shafiee; Mohsen Akbari
Journal:  Biosens Bioelectron       Date:  2016-12-30       Impact factor: 10.618

Review 2.  Isolation and characterization of urinary extracellular vesicles: implications for biomarker discovery.

Authors:  Michael L Merchant; Ilse M Rood; Jeroen K J Deegens; Jon B Klein
Journal:  Nat Rev Nephrol       Date:  2017-10-30       Impact factor: 28.314

3.  Charge Detection Mass Spectrometry Measurements of Exosomes and other Extracellular Particles Enriched from Bovine Milk.

Authors:  Brooke A Brown; Xuyao Zeng; Aaron R Todd; Lauren F Barnes; Jonathan M A Winstone; Jonathan C Trinidad; Milos V Novotny; Martin F Jarrold; David E Clemmer
Journal:  Anal Chem       Date:  2020-02-07       Impact factor: 6.986

4.  A Protocol for Isolation, Purification, Characterization, and Functional Dissection of Exosomes.

Authors:  Alin Rai; Haoyun Fang; Monique Fatmous; Bethany Claridge; Qi Hui Poh; Richard J Simpson; David W Greening
Journal:  Methods Mol Biol       Date:  2021

5.  Urinary Extracellular Vesicles Magic Particles for Biomarker Discovery.

Authors:  Karina Barreiro; Tobias B Huber; Harry Holthofer
Journal:  Adv Exp Med Biol       Date:  2021       Impact factor: 2.622

6.  Current Methods for the Isolation of Urinary Extracellular Vesicles.

Authors:  Serena Maggio; Emanuela Polidori; Paola Ceccaroli; Andrea Cioccoloni; Vilberto Stocchi; Michele Guescini
Journal:  Methods Mol Biol       Date:  2021

Review 7.  Emerging roles for miRNAs in the development, diagnosis, and treatment of diabetic nephropathy.

Authors:  Johanna K DiStefano; Matthew Taila; M Lucrecia Alvarez
Journal:  Curr Diab Rep       Date:  2013-08       Impact factor: 4.810

8.  Extracellular Vesicles: Evolving Contributors in Autoimmunity.

Authors:  Stergios Katsiougiannis
Journal:  For Immunopathol Dis Therap       Date:  2015

9.  Large-scale proteomics and phosphoproteomics of urinary exosomes.

Authors:  Patricia A Gonzales; Trairak Pisitkun; Jason D Hoffert; Dmitry Tchapyjnikov; Robert A Star; Robert Kleta; Nam Sun Wang; Mark A Knepper
Journal:  J Am Soc Nephrol       Date:  2008-12-03       Impact factor: 10.121

10.  The specificity of urinary aquaporin 1 and perilipin 2 to screen for renal cell carcinoma.

Authors:  Jeremiah J Morrissey; Evan D Kharasch
Journal:  J Urol       Date:  2012-11-12       Impact factor: 7.450

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