Literature DB >> 28746850

Investigation of N-Terminal Phospho-Regulation of Uracil DNA Glycosylase Using Protein Semisynthesis.

Brian P Weiser1, James T Stivers1, Philip A Cole2.   

Abstract

Uracil DNA Glycosylase (UNG2) is the primary enzyme in humans that prevents the stable incorporation of deoxyuridine monophosphate into DNA in the form of U/A basepairs. During S-phase, UNG2 remains associated with the replication fork through its interactions with two proteins, Proliferating Cell Nuclear Antigen (PCNA) and Replication Protein A (RPA), which are critical for DNA replication and repair. In this work, we used protein semisynthesis and fluorescence anisotropy assays to explore the interactions of UNG2 with PCNA and RPA and to determine the effects of two UNG2 phosphorylation sites (Thr6 and Tyr8) located within its PCNA-interacting motif (PIP-box). In binding assays, we found that phosphorylation of Thr6 or Tyr8 on UNG2 can impede PCNA binding without affecting UNG2 catalytic activity or its RPA interaction. Our data also suggests that unmodified UNG2, PCNA, and RPA can form a ternary protein complex. We propose that the UNG2 N-terminus may serve as a flexible scaffold to tether PCNA and RPA at the replication fork, and that post-translational modifications on the UNG2 N-terminus disrupt formation of the PCNA-UNG2-RPA protein complex.
Copyright © 2017 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2017        PMID: 28746850      PMCID: PMC5529330          DOI: 10.1016/j.bpj.2017.06.016

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  42 in total

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Journal:  Biophys J       Date:  2006-10-06       Impact factor: 4.033

Review 2.  PCNA, the maestro of the replication fork.

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Journal:  Cell       Date:  2007-05-18       Impact factor: 41.582

3.  Toward a comprehensive characterization of the phosphotyrosine proteome.

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Journal:  Cell Signal       Date:  2011-04-05       Impact factor: 4.315

4.  Effect of the thymidylate synthase inhibitors on dUTP and TTP pool levels and the activities of DNA repair glycosylases on uracil and 5-fluorouracil in DNA.

Authors:  Breeana C Grogan; Jared B Parker; Amy F Guminski; James T Stivers
Journal:  Biochemistry       Date:  2011-01-11       Impact factor: 3.162

5.  Post-replicative base excision repair in replication foci.

Authors:  M Otterlei; E Warbrick; T A Nagelhus; T Haug; G Slupphaug; M Akbari; P A Aas; K Steinsbekk; O Bakke; H E Krokan
Journal:  EMBO J       Date:  1999-07-01       Impact factor: 11.598

6.  Expressed protein ligation: a general method for protein engineering.

Authors:  T W Muir; D Sondhi; P A Cole
Journal:  Proc Natl Acad Sci U S A       Date:  1998-06-09       Impact factor: 11.205

7.  Identification of a novel, widespread, and functionally important PCNA-binding motif.

Authors:  Karin M Gilljam; Emadoldin Feyzi; Per A Aas; Mirta M L Sousa; Rebekka Müller; Cathrine B Vågbø; Tara C Catterall; Nina B Liabakk; Geir Slupphaug; Finn Drabløs; Hans E Krokan; Marit Otterlei
Journal:  J Cell Biol       Date:  2009-09-07       Impact factor: 10.539

8.  Cell cycle-specific UNG2 phosphorylations regulate protein turnover, activity and association with RPA.

Authors:  Lars Hagen; Bodil Kavli; Mirta M L Sousa; Kathrin Torseth; Nina B Liabakk; Ottar Sundheim; Javier Pena-Diaz; Marit Otterlei; Ole Hørning; Ole N Jensen; Hans E Krokan; Geir Slupphaug
Journal:  EMBO J       Date:  2007-12-13       Impact factor: 11.598

9.  Cell cycle regulation as a mechanism for functional separation of the apparently redundant uracil DNA glycosylases TDG and UNG2.

Authors:  Ulrike Hardeland; Christophe Kunz; Frauke Focke; Marta Szadkowski; Primo Schär
Journal:  Nucleic Acids Res       Date:  2007-05-25       Impact factor: 16.971

10.  Flexibility of PCNA-protein interface accommodates differential binding partners.

Authors:  Anthony M Pedley; Markus A Lill; V Jo Davisson
Journal:  PLoS One       Date:  2014-07-18       Impact factor: 3.240

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  18 in total

1.  Macromolecular crowding induces compaction and DNA binding in the disordered N-terminal domain of hUNG2.

Authors:  Gaddiel Rodriguez; Benjamin Orris; Ananya Majumdar; Shridhar Bhat; James T Stivers
Journal:  DNA Repair (Amst)       Date:  2019-12-10

Review 2.  Chemoenzymatic Semisynthesis of Proteins.

Authors:  Robert E Thompson; Tom W Muir
Journal:  Chem Rev       Date:  2019-11-27       Impact factor: 60.622

3.  Disordered N-Terminal Domain of Human Uracil DNA Glycosylase (hUNG2) Enhances DNA Translocation.

Authors:  Gaddiel Rodriguez; Alexandre Esadze; Brian P Weiser; Joseph D Schonhoft; Philip A Cole; James T Stivers
Journal:  ACS Chem Biol       Date:  2017-08-15       Impact factor: 5.100

4.  Comparative analysis of the catalytic regulation of NEDD4-1 and WWP2 ubiquitin ligases.

Authors:  Hanjie Jiang; Stefani N Thomas; Zan Chen; Claire Y Chiang; Philip A Cole
Journal:  J Biol Chem       Date:  2019-10-02       Impact factor: 5.157

5.  Measurement of nanoscale DNA translocation by uracil DNA glycosylase in human cells.

Authors:  Alexandre Esadze; Gaddiel Rodriguez; Brian P Weiser; Philip A Cole; James T Stivers
Journal:  Nucleic Acids Res       Date:  2017-12-01       Impact factor: 16.971

6.  Akt Kinase Activation Mechanisms Revealed Using Protein Semisynthesis.

Authors:  Nam Chu; Antonieta L Salguero; Albert Z Liu; Zan Chen; Daniel R Dempsey; Scott B Ficarro; William M Alexander; Jarrod A Marto; Yana Li; L Mario Amzel; Sandra B Gabelli; Philip A Cole
Journal:  Cell       Date:  2018-08-02       Impact factor: 41.582

7.  Site-Specific Protein Labeling with N-Hydroxysuccinimide-Esters and the Analysis of Ubiquitin Ligase Mechanisms.

Authors:  Daniel R Dempsey; Hanjie Jiang; Jay H Kalin; Zan Chen; Philip A Cole
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Review 8.  Facilitated Diffusion Mechanisms in DNA Base Excision Repair and Transcriptional Activation.

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Journal:  Chem Rev       Date:  2018-10-31       Impact factor: 60.622

9.  Substrate-Dependent Modulation of SIRT2 by a Fluorescent Probe, 1-Aminoanthracene.

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Journal:  Biochemistry       Date:  2020-09-29       Impact factor: 3.162

Review 10.  The N-terminal domain of uracil-DNA glycosylase: Roles for disordered regions.

Authors:  Jacob L Perkins; Linlin Zhao
Journal:  DNA Repair (Amst)       Date:  2021-02-18
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