Literature DB >> 33640758

The N-terminal domain of uracil-DNA glycosylase: Roles for disordered regions.

Jacob L Perkins1, Linlin Zhao2.   

Abstract

The presence of uracil in DNA calls for rapid removal facilitated by the uracil-DNA glycosylase superfamily of enzymes, which initiates the base excision repair (BER) pathway. In humans, uracil excision is accomplished primarily by the human uracil-DNA glycosylase (hUNG) enzymes. In addition to BER, hUNG enzymes play a key role in somatic hypermutation to generate antibody diversity. hUNG has several isoforms, with hUNG1 and hUNG2 being the two major isoforms. Both isoforms contain disordered N-terminal domains, which are responsible for a wide range of functions, with minimal direct impact on catalytic efficiency. Subcellular localization of hUNG enzymes is directed by differing N-terminal sequences, with hUNG1 dedicated to mitochondria and hUNG2 dedicated to the nucleus. An alternative isoform of hUNG1 has also been identified to localize to the nucleus in mouse and human cell models. Furthermore, hUNG2 has been observed at replication forks performing both pre- and post-replicative uracil excision to maintain genomic integrity. Replication protein A (RPA) and proliferating cell nuclear antigen (PCNA) are responsible for recruitment to replication forks via protein-protein interactions with the N-terminus of hUNG2. These interactions, along with protein degradation, are regulated by various post-translational modifications within the N-terminal tail, which are primarily cell-cycle dependent. Finally, translocation on DNA is also mediated by interactions between the N-terminus and DNA, which is enhanced under molecular crowding conditions by preventing diffusion events and compacting tail residues. This review summarizes recent research supporting the emerging roles of the N-terminal domain of hUNG.
Copyright © 2021 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Base excision repair; DNA damage; DNA repair; Deoxyuridine; Post-translational modification; Protein interaction

Mesh:

Substances:

Year:  2021        PMID: 33640758      PMCID: PMC8026556          DOI: 10.1016/j.dnarep.2021.103077

Source DB:  PubMed          Journal:  DNA Repair (Amst)        ISSN: 1568-7856


  59 in total

1.  Post-replicative base excision repair in replication foci.

Authors:  M Otterlei; E Warbrick; T A Nagelhus; T Haug; G Slupphaug; M Akbari; P A Aas; K Steinsbekk; O Bakke; H E Krokan
Journal:  EMBO J       Date:  1999-07-01       Impact factor: 11.598

2.  Disordered N-Terminal Domain of Human Uracil DNA Glycosylase (hUNG2) Enhances DNA Translocation.

Authors:  Gaddiel Rodriguez; Alexandre Esadze; Brian P Weiser; Joseph D Schonhoft; Philip A Cole; James T Stivers
Journal:  ACS Chem Biol       Date:  2017-08-15       Impact factor: 5.100

3.  Strikingly different properties of uracil-DNA glycosylases UNG2 and SMUG1 may explain divergent roles in processing of genomic uracil.

Authors:  Berit Doseth; Cecilie Ekre; Geir Slupphaug; Hans E Krokan; Bodil Kavli
Journal:  DNA Repair (Amst)       Date:  2012-04-06

4.  Uracil DNA glycosylase uses DNA hopping and short-range sliding to trap extrahelical uracils.

Authors:  Rishi H Porecha; James T Stivers
Journal:  Proc Natl Acad Sci U S A       Date:  2008-07-31       Impact factor: 11.205

5.  Human mitochondrial uracil-DNA glycosylase preform (UNG1) is processed to two forms one of which is resistant to inhibition by AP sites.

Authors:  S Bharati; H E Krokan; L Kristiansen; M Otterlei; G Slupphaug
Journal:  Nucleic Acids Res       Date:  1998-11-01       Impact factor: 16.971

6.  DNA translocation by human uracil DNA glycosylase: role of DNA phosphate charge.

Authors:  Joseph D Schonhoft; John G Kosowicz; James T Stivers
Journal:  Biochemistry       Date:  2013-04-02       Impact factor: 3.162

7.  Nuclear and mitochondrial splice forms of human uracil-DNA glycosylase contain a complex nuclear localisation signal and a strong classical mitochondrial localisation signal, respectively.

Authors:  M Otterlei; T Haug; T A Nagelhus; G Slupphaug; T Lindmo; H E Krokan
Journal:  Nucleic Acids Res       Date:  1998-10-15       Impact factor: 16.971

Review 8.  Facilitated Diffusion Mechanisms in DNA Base Excision Repair and Transcriptional Activation.

Authors:  Alexandre Esadze; James T Stivers
Journal:  Chem Rev       Date:  2018-10-31       Impact factor: 60.622

Review 9.  Uracil within DNA: an actor of antiviral immunity.

Authors:  Joséphine Sire; Gilles Quérat; Cécile Esnault; Stéphane Priet
Journal:  Retrovirology       Date:  2008-06-05       Impact factor: 4.602

10.  Uracil excision by endogenous SMUG1 glycosylase promotes efficient Ig class switching and impacts on A:T substitutions during somatic mutation.

Authors:  Felix A Dingler; Kristin Kemmerich; Michael S Neuberger; Cristina Rada
Journal:  Eur J Immunol       Date:  2014-05-27       Impact factor: 5.532

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  1 in total

1.  RPA2 winged-helix domain facilitates UNG-mediated removal of uracil from ssDNA; implications for repair of mutagenic uracil at the replication fork.

Authors:  Bodil Kavli; Tobias S Iveland; Edith Buchinger; Lars Hagen; Nina B Liabakk; Per A Aas; Tobias S Obermann; Finn L Aachmann; Geir Slupphaug
Journal:  Nucleic Acids Res       Date:  2021-04-19       Impact factor: 16.971

  1 in total

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