Literature DB >> 28745560

Genetic perspective of uniparental mitochondrial DNA landscape on the Punjabi population, Pakistan.

Shahzad Bhatti1,2, Sana Abbas2, Muhammad Aslamkhan1, Marcella Attimonelli3, Magali Segundo Trinidad4, Hikmet Hakan Aydin5, Erica Martinha Silva de Souza6, Gerardo Rodriguez Gonzalez7.   

Abstract

To investigate the uniparental genetic structure of the Punjabi population from mtDNA aspect and to set up an appropriate mtDNA forensic database, we studied maternally unrelated Punjabi (N = 100) subjects from two caste groups (i.e. Arain and Gujar) belonging to territory of Punjab. The complete control region was elucidated by Sanger sequencing and the subsequent 58 different haplotypes were designated into appropriate haplogroups according to the most recently updated mtDNA phylogeny. We found a homogenous dispersal of Eurasian haplogroup uniformity among the Punjab Province and exhibited a strong connotation with the European populations. Punjabi castes are primarily a composite of substantial South Asian, East Asian and West Eurasian lineages. Moreover, for the first time we have defined the newly sub-haplogroup M52b1 characterized by 16223 T, 16275 G and 16438 A in Gujar caste. The vast array of mtDNA variants displayed in this study suggested that the haplogroup composition radiates signals of extensive genetic conglomeration, population admixture and demographic expansion that was equipped with diverse origin, whereas matrilineal gene pool was phylogeographically homogenous across the Punjab. This context was further fully acquainted with the facts supported by PCA scatterplot that Punjabi population clustered with South Asian populations. Finally, the high power of discrimination (0.8819) and low random match probability (0.0085%) proposed a worthy contribution of mtDNA control region dataset as a forensic database that considered a gold standard of today to get deeper insight into the genetic ancestry of contemporary matrilineal phylogeny.

Keywords:  Mitochondrial DNA; Pakistan; Punjabi population; forensic database; haplogroups

Mesh:

Substances:

Year:  2017        PMID: 28745560     DOI: 10.1080/24701394.2017.1350951

Source DB:  PubMed          Journal:  Mitochondrial DNA A DNA Mapp Seq Anal        ISSN: 2470-1394            Impact factor:   1.514


  6 in total

1.  Anthropological analyses of 30 insertion/deletion autosomal markers in five major ethnic groups of Pakistan.

Authors:  Muhammad Adnan Shan; Julie Mechlenborg; Rebecca Røgen; Claus Børsting; Niels Morling
Journal:  Forensic Sci Res       Date:  2021-08-28

2.  MTHFR and F5 genetic variations have association with preeclampsia in Pakistani patients: a case control study.

Authors:  Feriha Fatima Khidri; Yar Muhammad Waryah; Faiza Kamran Ali; Hina Shaikh; Ikram Din Ujjan; Ali Muhammad Waryah
Journal:  BMC Med Genet       Date:  2019-10-23       Impact factor: 2.103

3.  The genetic affinities of Gujjar and Ladakhi populations of India.

Authors:  Mugdha Singh; Anujit Sarkar; Devinder Kumar; Madhusudan R Nandineni
Journal:  Sci Rep       Date:  2020-02-06       Impact factor: 4.379

4.  Whole genome sequencing data for two individuals of Pakistani descent.

Authors:  Shahid Y Khan; Firoz Kabir; Oussama M'Hamdi; Xiaodong Jiao; Muhammad Asif Naeem; Shaheen N Khan; Sheikh Riazuddin; J Fielding Hejtmancik; S Amer Riazuddin
Journal:  Sci Data       Date:  2018-09-11       Impact factor: 6.444

5.  Systematic sequence analysis of the FUT3 gene identifies 11 novel alleles in the Sindhi and Punjabi populations from Pakistan.

Authors:  Maomao Zhao; Atif Adnan; Allah Rakha; Shahid Nazir; Meihui Tian; Siyi Zhang; Hao Pang
Journal:  Sci Rep       Date:  2020-03-26       Impact factor: 4.379

6.  Contrasting maternal and paternal genetic histories among five ethnic groups from Khyber Pakhtunkhwa, Pakistan.

Authors:  Muhammad Tariq; Habib Ahmad; Brian E Hemphill; Umar Farooq; Theodore G Schurr
Journal:  Sci Rep       Date:  2022-01-19       Impact factor: 4.379

  6 in total

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