Literature DB >> 28745381

Toward a reverse hierarchy of halogen bonding between bromine and iodine.

Emmanuel Aubert1, Enrique Espinosa, Irène Nicolas, Olivier Jeannin, Marc Fourmigué.   

Abstract

We compare here the halogen bond characteristics of bimolecular adducts involving either N-bromo- or N-iodosaccharin as strong halogen bond donors, with 4-picoline as a common XB acceptor. In the NBSac·Pic system, the bromine atom of NBSac is displaced toward the picoline, almost at a median position between the two nitrogen atoms, NSac and N'Pic, with NSacBr and BrN'Pic distances at 2.073(6) and 2.098(6) Å respectively. This extreme situation contrasts with the analogous iodine derivative, NISac·Pic, where the NSac-I and IN'Pic distances amount to 2.223(4) and 2.301(4) Å respectively. Periodic DFT calculations, and molecular calculations of adducts (PBEPBE-D2 aug-cc-pVTZ) either at the experimental frozen geometry or with optimization of the halogen position, indicate a more important degree of covalency (i.e. shared-shell character) in the adduct formed with the bromine atom. A stronger charge transfer to the picoline is also found for the bromine (+0.27 |e|) than for the iodine (+0.18 |e|) system. This inversion of halogen bond strength between I and Br finds its origin in the strong covalent character of the interaction in these adducts, in line with the strength of covalent N-Br and N-I bonds. Detailed characterization of the critical points (CPs) of the L(r) = -∇2ρ(r) function along bonding directions has permitted the adducts to be distinguished and they can be respectively described as "neutral" NISac/Pic and "intermediate" NSac/Br/Pic, the latter with Br being close to formal equivalent NSacBr and BrN'Pic interactions but still more associated to the XB donor than to the picoline, as indicated by the topological and energetic properties of the ρ(r) function at the bond critical points (BCPs).

Entities:  

Year:  2017        PMID: 28745381     DOI: 10.1039/c7fd00067g

Source DB:  PubMed          Journal:  Faraday Discuss        ISSN: 1359-6640            Impact factor:   4.008


  6 in total

Review 1.  The Relevance of Experimental Charge Density Analysis in Unraveling Noncovalent Interactions in Molecular Crystals.

Authors:  Sajesh P Thomas; Amol G Dikundwar; Sounak Sarkar; Mysore S Pavan; Rumpa Pal; Venkatesha R Hathwar; Tayur N Guru Row
Journal:  Molecules       Date:  2022-06-08       Impact factor: 4.927

2.  Halogen bonding for the design of inhibitors by targeting the S1 pocket of serine proteases.

Authors:  Longguang Jiang; Xu Zhang; Yang Zhou; Yayu Chen; Zhipu Luo; Jinyu Li; Cai Yuan; Mingdong Huang
Journal:  RSC Adv       Date:  2018-08-06       Impact factor: 4.036

3.  Halogen Bond Asymmetry in Solution.

Authors:  Sofia Lindblad; Krenare Mehmeti; Alberte X Veiga; Bijan Nekoueishahraki; Jürgen Gräfenstein; Máté Erdélyi
Journal:  J Am Chem Soc       Date:  2018-10-04       Impact factor: 15.419

4.  Benchmarking of Halogen Bond Strength in Solution with Nickel Fluorides: Bromine versus Iodine and Perfluoroaryl versus Perfluoroalkyl Donors.

Authors:  Sarah J Pike; Christopher A Hunter; Lee Brammer; Robin N Perutz
Journal:  Chemistry       Date:  2019-06-18       Impact factor: 5.236

5.  Halogen Bond of Halonium Ions: Benchmarking DFT Methods for the Description of NMR Chemical Shifts.

Authors:  Daniel Sethio; Gerardo Raggi; Roland Lindh; Máté Erdélyi
Journal:  J Chem Theory Comput       Date:  2020-11-02       Impact factor: 6.006

6.  The Influence of Halogenated Hypercarbon on Crystal Packing in the Series of 1-Ph-2-X-1,2-dicarba-closo-dodecaboranes (X = F, Cl, Br, I).

Authors:  Miroslav Havránek; Maksim A Samsonov; Josef Holub; Zdeňka Růžičková; Ladislav Drož; Aleš Růžička; Jindřich Fanfrlík; Drahomír Hnyk
Journal:  Molecules       Date:  2020-03-06       Impact factor: 4.411

  6 in total

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