Literature DB >> 28735680

Dynamic Control of dNTP Synthesis in Early Embryos.

Yonghyun Song1, Robert A Marmion1, Junyoung O Park2, Debopriyo Biswas1, Joshua D Rabinowitz3, Stanislav Y Shvartsman4.   

Abstract

Exponential increase of cell numbers in early embryos requires large amounts of DNA precursors (deoxyribonucleoside triphosphates (dNTPs)). Little is understood about how embryos satisfy this demand. We examined dNTP metabolism in the early Drosophila embryo, in which gastrulation is preceded by 13 sequential nuclear cleavages within only 2 hr of fertilization. Surprisingly, despite the breakneck speed at which Drosophila embryos synthesize DNA, maternally deposited dNTPs can generate less than half of the genomes needed to reach gastrulation. The rest of the dNTPs are synthesized "on the go." The rate-limiting enzyme of dNTP synthesis, ribonucleotide reductase, is inhibited by endogenous levels of deoxyATP (dATP) present at fertilization and is activated as dATP is depleted via DNA polymerization. This feedback inhibition renders the concentration of dNTPs at gastrulation robust, with respect to large variations in maternal supplies, and is essential for normal progression of embryogenesis.
Copyright © 2017 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Drosophila; dNTP metabolism; embryogenesis; feedback inhibition; ribonucleotide reductase

Mesh:

Substances:

Year:  2017        PMID: 28735680      PMCID: PMC5630127          DOI: 10.1016/j.devcel.2017.06.013

Source DB:  PubMed          Journal:  Dev Cell        ISSN: 1534-5807            Impact factor:   12.270


  38 in total

1.  Cross-talk between the allosteric effector-binding sites in mouse ribonucleotide reductase.

Authors:  P Reichard; R Eliasson; R Ingemarson; L Thelander
Journal:  J Biol Chem       Date:  2000-10-20       Impact factor: 5.157

2.  S-phase-specific expression of mammalian ribonucleotide reductase R1 and R2 subunit mRNAs.

Authors:  S Björklund; S Skog; B Tribukait; L Thelander
Journal:  Biochemistry       Date:  1990-06-12       Impact factor: 3.162

3.  Mitochondrial regulation in sea urchins. I. Mitochondrial ultrastructure transformations and changes in the ADP:ATP ratio at fertilization.

Authors:  M A Innis; T R Beers; S P Craig
Journal:  Exp Cell Res       Date:  1976-03-01       Impact factor: 3.905

4.  Ribonucleoside diphosphate reductase induced by bacteriophage T4. II. Allosteric regulation of substrate sepecificity and catalytic activity.

Authors:  O Berglund
Journal:  J Biol Chem       Date:  1972-11-25       Impact factor: 5.157

5.  Zygotic genome activation triggers the DNA replication checkpoint at the midblastula transition.

Authors:  Shelby A Blythe; Eric F Wieschaus
Journal:  Cell       Date:  2015-03-05       Impact factor: 41.582

6.  Waves of Cdk1 Activity in S Phase Synchronize the Cell Cycle in Drosophila Embryos.

Authors:  Victoria E Deneke; Anna Melbinger; Massimo Vergassola; Stefano Di Talia
Journal:  Dev Cell       Date:  2016-08-22       Impact factor: 12.270

7.  Modulation of gurken translation by insulin and TOR signaling in Drosophila.

Authors:  Scott B Ferguson; Malachi A Blundon; Martha S Klovstad; Trudi Schüpbach
Journal:  J Cell Sci       Date:  2012-02-10       Impact factor: 5.285

8.  Requirement for deoxycytidine kinase in T and B lymphocyte development.

Authors:  Gerald Toy; Wayne R Austin; Hsiang-I Liao; Donghui Cheng; Arun Singh; Dean O Campbell; Tomo-o Ishikawa; Lynn W Lehmann; Nagichettiar Satyamurthy; Michael E Phelps; Harvey R Herschman; Johannes Czernin; Owen N Witte; Caius G Radu
Journal:  Proc Natl Acad Sci U S A       Date:  2009-12-31       Impact factor: 11.205

9.  Coordinated metabolic transitions during Drosophila embryogenesis and the onset of aerobic glycolysis.

Authors:  Jason M Tennessen; Nicolas M Bertagnolli; Janelle Evans; Matt H Sieber; James Cox; Carl S Thummel
Journal:  G3 (Bethesda)       Date:  2014-03-12       Impact factor: 3.154

10.  Intrapopulation genome size variation in D. melanogaster reflects life history variation and plasticity.

Authors:  Lisa L Ellis; Wen Huang; Andrew M Quinn; Astha Ahuja; Ben Alfrejd; Francisco E Gomez; Carl E Hjelmen; Kristi L Moore; Trudy F C Mackay; J Spencer Johnston; Aaron M Tarone
Journal:  PLoS Genet       Date:  2014-07-24       Impact factor: 5.917

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  13 in total

1.  Self-Similar Dynamics of Nuclear Packing in the Early Drosophila Embryo.

Authors:  Sayantan Dutta; Nareg J-V Djabrayan; Salvatore Torquato; Stanislav Y Shvartsman; Matej Krajnc
Journal:  Biophys J       Date:  2019-07-16       Impact factor: 4.033

2.  Heat Oscillations Driven by the Embryonic Cell Cycle Reveal the Energetic Costs of Signaling.

Authors:  Jonathan Rodenfels; Karla M Neugebauer; Jonathon Howard
Journal:  Dev Cell       Date:  2019-01-31       Impact factor: 12.270

3.  Metabolic Regulation of Developmental Cell Cycles and Zygotic Transcription.

Authors:  Nareg J-V Djabrayan; Celia M Smits; Matej Krajnc; Tomer Stern; Shigehiro Yamada; William C Lemon; Philipp J Keller; Christine A Rushlow; Stanislav Y Shvartsman
Journal:  Curr Biol       Date:  2019-03-14       Impact factor: 10.834

4.  Excess dNTPs Trigger Oscillatory Surface Flow in the Early Drosophila Embryo.

Authors:  Sayantan Dutta; Nareg J-V Djabrayan; Celia M Smits; Clarence W Rowley; Stanislav Y Shvartsman
Journal:  Biophys J       Date:  2020-03-29       Impact factor: 4.033

5.  Cellular metabolic reprogramming controls sugar appetite in Drosophila.

Authors:  Zita Carvalho-Santos; Rita Cardoso-Figueiredo; Ana Paula Elias; Ibrahim Tastekin; Célia Baltazar; Carlos Ribeiro
Journal:  Nat Metab       Date:  2020-08-31

6.  Fast and sensitive HPLC-MS/MS method for direct quantification of intracellular deoxyribonucleoside triphosphates from tissue and cells.

Authors:  Sigurast Olafsson; Dale Whittington; Jason Murray; Michael Regnier; Farid Moussavi-Harami
Journal:  J Chromatogr B Analyt Technol Biomed Life Sci       Date:  2017-10-05       Impact factor: 3.205

7.  The role of dNTP metabolites in control of the embryonic cell cycle.

Authors:  Boyang Liu; Jörg Großhans
Journal:  Cell Cycle       Date:  2019-09-22       Impact factor: 4.534

Review 8.  Still no Rest for the Reductases: Ribonucleotide Reductase (RNR) Structure and Function: An Update.

Authors:  Marcus J C Long; Phillippe Ly; Yimon Aye
Journal:  Subcell Biochem       Date:  2022

Review 9.  Balancing energy expenditure and storage with growth and biosynthesis during Drosophila development.

Authors:  Claire M Gillette; Jason M Tennessen; Tânia Reis
Journal:  Dev Biol       Date:  2021-02-11       Impact factor: 3.148

Review 10.  Activating embryonic development in Drosophila.

Authors:  Emir E Avilés-Pagán; Terry L Orr-Weaver
Journal:  Semin Cell Dev Biol       Date:  2018-02-21       Impact factor: 7.727

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