| Literature DB >> 28732081 |
Chike O Abana1, Brian S Bingham1, Ju Hwan Cho2, Amy J Graves3,4, Tatsuki Koyama4, Robert T Pilarski5, A Bapsi Chakravarthy1, Fen Xia6.
Abstract
INTRODUCTION: Although tumor metastases remain significant drivers of mortality, the genetic factors that increase the risks of metastases are not fully identified. Interleukin 6 (IL-6) has emerged as an important factor in breast cancer progression with IL-6 single nucleotide polymorphism (SNP) variants shown to affect survival. We hypothesized that SNPs of the IL-6 promoter at rs1800795 in breast cancer patients are associated with distant metastases.Entities:
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Year: 2017 PMID: 28732081 PMCID: PMC5521838 DOI: 10.1371/journal.pone.0181725
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
VUMC patient demographics.
| Demographics | Case Patients | Control Patients |
|---|---|---|
| Male | 154 (55.6%) | 330 (46.4%) |
| Female | 123 (44.4%) | 381 (53.6%) |
| Non-Hispanic white | 239 (89.2%) | 617 (90.2%) |
| Black | 28 (10.4%) | 60 (8.8%) |
| Other | 1 (0.4%) | 7 (1.0%) |
| <51 | 33 (11.9%) | 95 (13.4%) |
| 51–60 | 57 (20.6%) | 145 (20.4%) |
| 61–70 | 90 (32.5%) | 199 (28.0%) |
| 71–80 | 60 (21.7%) | 153 (21.5%) |
| 81–90 | 30 (10.8%) | 92 (12.9% |
| >90 | 7 (2.5%) | 27 (3.8%) |
| Breast | 35 (12.6%) | 127 (17.9%) |
| Other | 242 (87.4%) | 584 (82.1%) |
| 277 | 711 | |
aRace information was missing for 9 case patients and 27 control patients.
Fig 1Log10(P-values) for associations between 105 SNPs and distant metastases in the VUMC study.
- Threshold for statistically significant association was set at P = 0.005 (solid, horizontal red line). P-values were obtained using Fisher’s exact test.
Fig 2VUMC cohort: rs1800795 and rs4506565 SNPs are associated with distant metastases.
Graphs show the proportions of homozygous dominant, heterozygous and homozygous recessive alleles at (A) rs1800795 and (B) rs4506565. Total patient numbers shown represent non-missing values. Six controls had missing rs1800795 genotype information. One case and eight controls had missing rs4506565 genotype information. Statistical analyses show ANOVA test of overall association between SNPs and case or control status.
Ohio State University cohort: Patient and tumor characteristics.
| Case Patients | Control Patients | |
|---|---|---|
| Non-Hispanic white | 157 (86.3%) | 158 (87.8%) |
| Black/Asian | 25 (13.7%) | 22 (12.2%) |
| <51 | 79 (43.2%) | 81 (44.3%) |
| 51–60 | 64 (35.0%) | 50 (27.3%) |
| 61–70 | 24 (13.1%) | 31 (16.9%) |
| 71–80 | 11 (6.0%) | 13 (7.1%) |
| 81–90 | 5 (2.7%) | 8 (4.4%) |
| 1 | 21 (12.7%) | 28 (16.7%) |
| 2 | 52 (31.5%) | 61 (36.3%) |
| 3+ | 92 (55.8%) | 79 (47.0%) |
| 1 | 16 (9.2%) | 23 (12.7%) |
| 2 | 56 (32.2%) | 60 (33.1%) |
| 3 | 102 (58.6%) | 98 (54.1%) |
| Positive | 114 (62.3%) | 123 (68.3%) |
| Negative | 69 (37.7%) | 57 (31.7%) |
| Positive | 94 (51.4%) | 104 (58.1%) |
| Negative | 89 (48.6%) | 75 (41.9%) |
| Positive | 38 (21.0%) | 44 (24.6%) |
| Negative | 143 (79.0%) | 135 (75.4%) |
| 183 | 183 | |
aTotal patient numbers shown represent total case or control patients identified, including those with missing values.
bRace, stage at diagnosis, tumor grade, and HER2/neu receptor status were missing for 3, 18, 9, and 2 case patients, respectively.
cRace, stage at diagnosis, tumor grade, estrogen receptor status, progesterone receptor status, and HER2/neu receptor status were missing for 1, 15, 2, 3, 1, and 4 control patients, respectively.
Fig 3All Ohio State University breast cancer cases develop metastases within ten years from primary diagnosis.
Kaplan-Meier curve shows changes in proportion of metastasis-free breast cancer cases as they develop metastasis after primary diagnosis. “CC”: red dotted line; “CG”: blue dotted-solid line, and “GG”: black solid line.
Ohio State University cohort: Patient and tumor characteristics by rs1800795 status.
| CG | CC | GG | ||
|---|---|---|---|---|
| Non-Hispanic white | 166 (90.7%) | 53 (98.1%) | 90 (76.3%) | <0.001 |
| Black/Asian | 17 (9.3%) | 1 (1.9%) | 28 (23.7%) | |
| <51 | 77 (41.6%) | 22 (40.0%) | 56 (47.0%) | 0.024 |
| 51–60 | 61 (33.0%) | 15 (27.3%) | 37 (31.1%) | |
| 61–70 | 32 (17.3%) | 13 (23.6%) | 9 (7.6%) | |
| 71–80 | 11 (5.9%) | 5 (9.1%) | 8 (6.7%) | |
| 81–90 | 4 (2.2%) | 0 (0.0%) | 9 (7.6%) | |
| 53.2±11.7 | 53.9±12.0 | 53.3±13.8 | 0.498 | |
| 1 | 23 (12.8%) | 3 (5.8%) | 12 (10.3%) | 0.420 |
| 2 | 60 (33.3%) | 20 (38.5%) | 33 (28.2%) | |
| 3 | 97 (53.9%) | 29 (55.8%) | 72 (61.5%) | |
| Positive | 120 (65.6%) | 34 (63.0%) | 78 (65.5%) | 0.934 |
| Negative | 63 (34.4%) | 20 (37.0%) | 41 (34.5%) | |
| Positive | 101 (55.2%) | 28 (52.8%) | 64 (53.8%) | 0.943 |
| Negative | 82 (44.8%) | 25 (47.2%) | 55 (46.2%) | |
| Positive | 50 (27.3%) | 8 (14.8%) | 24 (20.7%) | 0.117 |
| Negative | 133 (72.7%) | 46 (85.2%) | 92 (79.3%) | |
aP values were determined using Pearson’s χ2 test.
bP value was determined using Kruskal-Wallis test.
Fig 4Ohio State University cohort: rs1800795 SNP is associated with distant metastases of primary breast cancer.
Graphs show the proportions of homozygous dominant, heterozygous, and homozygous recessive alleles at (A) rs1800795 and (B) rs4506565 from primary breast cancer patients. Total patient numbers shown represent non-missing values. P values represent test for overall association between SNPs and case or control status, and were determined using ANOVA.
Ohio State University cohort: Conditional logistic regression model for rs1800795 SNP association with breast cancer metastases.
| Odds ratio | 95% CI | ||
|---|---|---|---|
| rs1800795: CC vs. CG | 1.23 | 0.56–2.70 | 0.609 |
| rs1800795: GG vs. CG | 2.52 | 1.39–4.56 | 0.002 |
| Age | 0.99 | 0.96–1.02 | 0.556 |
| Race: Black/Asian vs. non-Hispanic white | 0.77 | 0.16–3.63 | 0.742 |
| Stage: 2 vs. 1 | 0.56 | 0.13–2.41 | 0.441 |
| Stage: 3+ vs. 1 | 4.14 | 0.92–18.70 | 0.065 |
| Grade: 2 vs. 1 | 4.36 | 0.36–52.58 | 0.247 |
| Grade: 3 vs. 1 | 2.68 | 0.19–37.91 | 0.466 |
| ER: Positive vs. Negative | 0.91 | 0.37–2.23 | 0.835 |
| PR: Positive vs. Negative | 0.66 | 0.30–1.49 | 0.322 |
| HER2: Positive vs. Negative | 0.45 | 0.22–0.94 | 0.033 |
aEach variable was assessed for significant association with case status (i.e. distant metastasis) while controlling for all other variables.
Ohio State University cohort: Conditional logistic regression model for rs1800795 SNP association with breast cancer metastases among non-Hispanic whites only.
| Odds ratio | 95% CI | ||
|---|---|---|---|
| rs1800795: CC vs. CG | 1.06 | 0.47–2.38 | 0.897 |
| rs1800795: GG vs. CG | 2.55 | 1.33–4.88 | 0.005 |
| Age | 0.99 | 0.96–1.03 | 0.738 |
| Stage: 2 vs. 1 | 0.33 | 0.06–1.69 | 0.183 |
| Stage: 3+ vs. 1 | 3.55 | 0.74–17.04 | 0.114 |
| Grade: 2 vs. 1 | 1.96 | 0.16–24.77 | 0.602 |
| Grade: 3 vs. 1 | 1.28 | 0.10–16.79 | 0.852 |
| ER: Positive vs. Negative | 1.07 | 0.40–2.86 | 0.899 |
| PR: Positive vs. Negative | 0.51 | 0.21–1.27 | 0.149 |
| HER2: Positive vs. Negative | 0.50 | 0.22–1.15 | 0.101 |
aEach variable was assessed for significant association with case status (i.e. distant metastasis) while controlling for all other variables.