| Literature DB >> 28729544 |
Maryam Emami Khansari1, Ali Mirchi1, Avijit Pramanik1, Corey R Johnson1, Jerzy Leszczynski2, Md Alamgir Hossain3.
Abstract
The recognition of anions by designed receptors has attracted much attention in recent days. In particular, the selective binding of sulfate with artificial receptors is important because of its relevance to many biological and environmental applications. However, the development of organized molecular receptors with high-efficiency for sulfate binding still remains a significant challenge. We report a novel para-phenylene-bridged hexafunctional tripodal receptor that contains a urea-based inner cleft and a thiourea-based outer cleft, providing perfect sites for step-wise binding of two anions within a single cavity. The new receptor was synthesized in a three-step process, and was investigated for its anion binding properties by 1H NMR titrations, 2D NOESY experiments and computational studies. As indicated by solution binding studies, the receptor selectively binds sulfate over other oxoanions, forming a 1:2 stoichiometric complex that is stabilized via strong H-bonding interactions. High-level DFT calculations reveal that the receptor, owing to the enhanced H-bonding ability of thiourea groups, initially encapsulates one sulfate in its thiourea-based outer cleft, followed by a second encapsulation in its urea-based inner cleft. Such a functionalized receptor with the unique combination of urea-based cleft and thiourea-based cleft in a single receptor has not been reported previously.Entities:
Mesh:
Substances:
Year: 2017 PMID: 28729544 PMCID: PMC5519707 DOI: 10.1038/s41598-017-05831-x
Source DB: PubMed Journal: Sci Rep ISSN: 2045-2322 Impact factor: 4.379
Figure 1(a) Synthetic scheme for L ((i) p-nitrophenyl isocyanate, (ii) Hydrazine hydrate and Pd/C (10%), and (iii) p-cyanophenyl isothiocyanate), and (b) electrostatic potential map for L, calculated at the M06-2X/6-31G(d,p) level of theory (red = negative potential, and blue = positive potential).
Figure 2(a) Partial 1H NMR spectra of L (2 mM) in the presence of 5 equivalents of different anions in DMSO-d ; (b) partial 1HNMR titration of L showing changes in the NH chemical shifts of L (2 mM) with an increasing amount of SO4 2− (20 mM) in DMSO-d . (H1 = CH2NHCO, H2 = CONHAr, H3 = ArNHCS, H4 = CSNHAr); and (c) proposed binding mechanism of L with SO4 2−.
Figure 31H NMR titration curves of L (2 mM) with an increasing amount of various oxoanions (R = [anion]0/[L]0) in DMSO-d .
Binding constants of L for anions (A) in DMSO-d .
|
| Log | Log | Log |
|---|---|---|---|
| SO4 2− | 3.07(3) | 2.56(4) | 5.63(4) |
| HSO4 − | 2.41(5) | 1.65(5) | 4.06(5) |
| H2PO4 − | 2.06(5) | 1.75(3) | 3.81(5) |
| ClO4 − | <1 | <1 | <1 |
| NO3 − | <1 | <1 | <1 |
aThe binding constants were determined using a 1:2 binding model for the following reaction: .
Figure 42D NOESY NMR experiment of (a) Free L, and (b) L in the presence of one equivalent of sulfate anion in DMSO-d at room temperature.
Figure 5Optimized structures of (a) L, (b) thiourea-bound 1:1 complex [L(SO4)]2−, and (c) urea-bound 1:1 complex [L(SO4)]2−, calculated at the M06-2X/6-31G(d,p) level of theory.
Figure 6Optimized structures of 1:2 complex [L(SO4)2]4− complex showing (a) perspective view, and (b) space filling model, calculated at the M06-2X/6-31G(d,p) level of theory.
Hydrogen parameters (Å, °) for the sulfate complexes of L calculated with DFT at M06-2X/6-31G(d,p).
| Complex | NH | NH | H | ∠DHO |
|---|---|---|---|---|
| Thiourea-bound [ | N8H | 2.935 | 1.908 | 174.1 |
| N9H | 2.784 | 1.758 | 170.4 | |
| N10H | 2.935 | 1.908 | 174.1 | |
| N11H | 2.784 | 1.758 | 170.4 | |
| N12H | 2.935 | 1.908 | 174.1 | |
| N13H | 2.784 | 1.758 | 170.4 | |
| Urea-bound [ | N2H | 2.789 | 1.799 | 160.8 |
| N3H | 2.847 | 1.839 | 164.6 | |
| N4H | 2.778 | 1.786 | 161.1 | |
| N5H | 2.869 | 1.869 | 162.7 | |
| N6H | 2.775 | 1.785 | 160.6 | |
| N7H | 2.869 | 1.866 | 163.7 | |
| [ | N2H | 2.678 | 1.643 | 168.8 |
| N3H | 2.883 | 1.989 | 144.4 | |
| N8H | 2.934 | 1.998 | 150.3 | |
| N9H | 2.701 | 1.675 | 166.2 | |
| N4H | 2.678 | 1.643 | 168.8 | |
| N5H | 2.883 | 1.989 | 144.4 | |
| N10H | 2.934 | 1.998 | 150.3 | |
| N11H | 2.701 | 1.675 | 166.2 | |
| N6H | 2.678 | 1.643 | 168.8 | |
| N7H | 2.883 | 1.989 | 144.4 | |
| N12H | 2.934 | 1.998 | 150.3 | |
| N13H | 2.701 | 1.675 | 166.2 |