Literature DB >> 28728982

NMR Studies of Large Proteins.

Yajun Jiang1, Charalampos G Kalodimos2.   

Abstract

Recent breakthroughs in isotope-labeling and pulse sequence techniques have enabled the NMR characterization of large protein systems with molecular masses of hundreds of kilodaltons. NMR studies of a great variety of large proteins have provided unique insights into the binding, dynamic, and allosteric mechanisms. Here we present a brief summary of these developments by highlighting few cases that exemplify the uniqueness of NMR in providing atomic resolution information into key dynamic processes and structures of protein complexes with high degree of flexibility.
Copyright © 2017 Elsevier Ltd. All rights reserved.

Keywords:  NMR spectroscopy; large proteins; protein complexes

Mesh:

Substances:

Year:  2017        PMID: 28728982     DOI: 10.1016/j.jmb.2017.07.007

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  18 in total

1.  Coarse-grain simulations on NMR conformational ensembles highlight functional residues in proteins.

Authors:  Sophie Sacquin-Mora
Journal:  J R Soc Interface       Date:  2019-07-10       Impact factor: 4.118

2.  Reversible inhibition of the ClpP protease via an N-terminal conformational switch.

Authors:  Siavash Vahidi; Zev A Ripstein; Massimiliano Bonomi; Tairan Yuwen; Mark F Mabanglo; Jordan B Juravsky; Kamran Rizzolo; Algirdas Velyvis; Walid A Houry; Michele Vendruscolo; John L Rubinstein; Lewis E Kay
Journal:  Proc Natl Acad Sci U S A       Date:  2018-06-25       Impact factor: 11.205

3.  Cotranslocational processing of the protein substrate calmodulin by an AAA+ unfoldase occurs via unfolding and refolding intermediates.

Authors:  Rafal Augustyniak; Lewis E Kay
Journal:  Proc Natl Acad Sci U S A       Date:  2018-05-07       Impact factor: 11.205

Review 4.  Successes and challenges in simulating the folding of large proteins.

Authors:  Anne Gershenson; Shachi Gosavi; Pietro Faccioli; Patrick L Wintrode
Journal:  J Biol Chem       Date:  2019-11-11       Impact factor: 5.157

5.  A methyl-TROSY approach for NMR studies of high-molecular-weight DNA with application to the nucleosome core particle.

Authors:  Gili Abramov; Algirdas Velyvis; Enrico Rennella; Leo E Wong; Lewis E Kay
Journal:  Proc Natl Acad Sci U S A       Date:  2020-05-26       Impact factor: 11.205

6.  Paired Simulations and Experimental Investigations into the Calcium-Dependent Conformation of Albumin.

Authors:  Dharmeshkumar Patel; Stephanie L Haag; Jagdish Suresh Patel; F Marty Ytreberg; Matthew T Bernards
Journal:  J Chem Inf Model       Date:  2022-02-23       Impact factor: 4.956

7.  An intrinsically disordered motif regulates the interaction between the p47 adaptor and the p97 AAA+ ATPase.

Authors:  Alexander E Conicella; Rui Huang; Zev A Ripstein; Ai Nguyen; Eric Wang; Thomas Löhr; Peter Schuck; Michele Vendruscolo; John L Rubinstein; Lewis E Kay
Journal:  Proc Natl Acad Sci U S A       Date:  2020-10-07       Impact factor: 11.205

8.  Development and application of multicolor burst analysis spectroscopy.

Authors:  Daniel Shoup; Andrew Roth; Rajan Thapa; Jason Puchalla; Hays S Rye
Journal:  Biophys J       Date:  2021-04-05       Impact factor: 3.699

9.  Assessment of the Higher-Order Structure of Formulated Monoclonal Antibody Therapeutics by 2D Methyl Correlated NMR and Principal Component Analysis.

Authors:  Luke W Arbogast; Frank Delaglio; Robert G Brinson; John P Marino
Journal:  Curr Protoc Protein Sci       Date:  2020-06

Review 10.  Coming of Age: Cryo-Electron Tomography as a Versatile Tool to Generate High-Resolution Structures at Cellular/Biological Interfaces.

Authors:  Zuoneng Wang; Qingyang Zhang; Carsten Mim
Journal:  Int J Mol Sci       Date:  2021-06-08       Impact factor: 5.923

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