Literature DB >> 28716721

The Evolving Genomic Landscape of Barrett's Esophagus and Esophageal Adenocarcinoma.

Gianmarco Contino1, Thomas L Vaughan2, David Whiteman3, Rebecca C Fitzgerald4.   

Abstract

We have recently gained unprecedented insight into genetic factors that determine risk for Barrett's esophagus (BE) and progression to esophageal adenocarcinoma (EA). Next-generation sequencing technologies have allowed us to identify somatic mutations that initiate BE and track genetic changes during development of tumors and invasive cancer. These technologies led to identification of mechanisms of tumorigenesis that challenge the current multistep model of progression to EA. Newer, cost-effective technologies create opportunities to rapidly translate the analysis of DNA into tools that can identify patients with BE at high risk for cancer, detect dysplastic lesions more reliably, and uncover mechanisms of carcinogenesis.
Copyright © 2017 AGA Institute. Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Chromothripsis; Cytosponge; Esophagus; Genome-wide Association Study; Mutational Signature

Mesh:

Year:  2017        PMID: 28716721      PMCID: PMC6025803          DOI: 10.1053/j.gastro.2017.07.007

Source DB:  PubMed          Journal:  Gastroenterology        ISSN: 0016-5085            Impact factor:   22.682


  110 in total

1.  A segregation analysis of Barrett's esophagus and associated adenocarcinomas.

Authors:  Xiangqing Sun; Robert Elston; Jill Barnholtz-Sloan; Gary Falk; William M Grady; Margaret Kinnard; Sumeet K Mittal; Joseph E Willis; Sanford Markowitz; Wendy Brock; Amitabh Chak
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2010-03-03       Impact factor: 4.254

2.  Characterization of the timing and prevalence of receptor tyrosine kinase expression changes in oesophageal carcinogenesis.

Authors:  Anna L Paterson; Maria O'Donovan; Elena Provenzano; Liam J Murray; Helen G Coleman; Brian T Johnson; Damian T McManus; Marco Novelli; Laurence B Lovat; Rebecca C Fitzgerald
Journal:  J Pathol       Date:  2013-03-22       Impact factor: 7.996

Review 3.  Obesity and genomics: role of technology in unraveling the complex genetic architecture of obesity.

Authors:  Yamunah Devi Apalasamy; Zahurin Mohamed
Journal:  Hum Genet       Date:  2015-02-17       Impact factor: 4.132

4.  Defining cure for esophageal cancer: analysis of actual 5-year survivors following esophagectomy.

Authors:  Jodi Hirst; Bernard Mark Smithers; David C Gotley; Janine Thomas; Andrew Barbour
Journal:  Ann Surg Oncol       Date:  2011-01-07       Impact factor: 5.344

Review 5.  Barrett's oesophagus and oesophageal adenocarcinoma: time for a new synthesis.

Authors:  Brian J Reid; Xiaohong Li; Patricia C Galipeau; Thomas L Vaughan
Journal:  Nat Rev Cancer       Date:  2010-02       Impact factor: 60.716

6.  Barrett associated MHC and FOXF1 variants also increase esophageal carcinoma risk.

Authors:  Polat Dura; Elke M van Veen; Jody Salomon; Rene H M te Morsche; Hennie M J Roelofs; Jon O Kristinsson; Theo Wobbes; Ben J M Witteman; Adriaan C I T L Tan; Joost P H Drenth; Wilbert H M Peters
Journal:  Int J Cancer       Date:  2013-04-16       Impact factor: 7.396

7.  A systematic approach to therapeutic target selection in oesophago-gastric cancer.

Authors:  Anna L Paterson; Nicholas B Shannon; Pierre Lao-Sirieix; Chin-Ann J Ong; Christopher J Peters; Maria O'Donovan; Rebecca C Fitzgerald
Journal:  Gut       Date:  2012-07-06       Impact factor: 23.059

8.  Germline variation in inflammation-related pathways and risk of Barrett's oesophagus and oesophageal adenocarcinoma.

Authors:  Matthew F Buas; Qianchuan He; Lisa G Johnson; Lynn Onstad; David M Levine; Aaron P Thrift; Puya Gharahkhani; Claire Palles; Jesper Lagergren; Rebecca C Fitzgerald; Weimin Ye; Carlos Caldas; Nigel C Bird; Nicholas J Shaheen; Leslie Bernstein; Marilie D Gammon; Anna H Wu; Laura J Hardie; Paul D Pharoah; Geoffrey Liu; Prassad Iyer; Douglas A Corley; Harvey A Risch; Wong-Ho Chow; Hans Prenen; Laura Chegwidden; Sharon Love; Stephen Attwood; Paul Moayyedi; David MacDonald; Rebecca Harrison; Peter Watson; Hugh Barr; John deCaestecker; Ian Tomlinson; Janusz Jankowski; David C Whiteman; Stuart MacGregor; Thomas L Vaughan; Margaret M Madeleine
Journal:  Gut       Date:  2016-08-02       Impact factor: 23.059

9.  Exome and whole-genome sequencing of esophageal adenocarcinoma identifies recurrent driver events and mutational complexity.

Authors:  Austin M Dulak; Petar Stojanov; Shouyong Peng; Michael S Lawrence; Cameron Fox; Chip Stewart; Santhoshi Bandla; Yu Imamura; Steven E Schumacher; Erica Shefler; Aaron McKenna; Scott L Carter; Kristian Cibulskis; Andrey Sivachenko; Gordon Saksena; Douglas Voet; Alex H Ramos; Daniel Auclair; Kristin Thompson; Carrie Sougnez; Robert C Onofrio; Candace Guiducci; Rameen Beroukhim; Zhongren Zhou; Lin Lin; Jules Lin; Rishindra Reddy; Andrew Chang; Rodney Landrenau; Arjun Pennathur; Shuji Ogino; James D Luketich; Todd R Golub; Stacey B Gabriel; Eric S Lander; David G Beer; Tony E Godfrey; Gad Getz; Adam J Bass
Journal:  Nat Genet       Date:  2013-03-24       Impact factor: 38.330

10.  Mobile element insertions are frequent in oesophageal adenocarcinomas and can mislead paired-end sequencing analysis.

Authors:  Anna L Paterson; Jamie M J Weaver; Matthew D Eldridge; Simon Tavaré; Rebecca C Fitzgerald; Paul A W Edwards
Journal:  BMC Genomics       Date:  2015-07-10       Impact factor: 3.969

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  36 in total

Review 1.  From genetics to signaling pathways: molecular pathogenesis of esophageal adenocarcinoma.

Authors:  Ravindran Caspa Gokulan; Monica T Garcia-Buitrago; Alexander I Zaika
Journal:  Biochim Biophys Acta Rev Cancer       Date:  2019-05-30       Impact factor: 10.680

2.  Evaluation of Dysplasia in Barrett Esophagus.

Authors:  Seth A Gross; Joseph Kingsbery; Janice Jang; Michelle Lee; Abraham Khan
Journal:  Gastroenterol Hepatol (N Y)       Date:  2018-04

Review 3.  Are Gastric and Esophageal Metaplasia Relatives? The Case for Barrett's Stemming from SPEM.

Authors:  Ramon U Jin; Jason C Mills
Journal:  Dig Dis Sci       Date:  2018-08       Impact factor: 3.199

4.  Gene-Environment Interactions and the Risk of Barrett's Esophagus in Three US Cohorts.

Authors:  Marta Crous-Bou; Manol Jovani; Immaculata De Vivo; Brian C Jacobson
Journal:  Am J Gastroenterol       Date:  2019-06       Impact factor: 10.864

Review 5.  Phenotypes of Gastroesophageal Reflux Disease: Where Rome, Lyon, and Montreal Meet.

Authors:  David A Katzka; John E Pandolfino; Peter J Kahrilas
Journal:  Clin Gastroenterol Hepatol       Date:  2019-07-15       Impact factor: 11.382

Review 6.  Molecular Evolution of Metaplasia to Adenocarcinoma in the Esophagus.

Authors:  William M Grady; Ming Yu
Journal:  Dig Dis Sci       Date:  2018-08       Impact factor: 3.199

7.  Detection of Mutations in Barrett's Esophagus Before Progression to High-Grade Dysplasia or Adenocarcinoma.

Authors:  Matthew D Stachler; Nicholas D Camarda; Christopher Deitrick; Anthony Kim; Agoston T Agoston; Robert D Odze; Jason L Hornick; Anwesha Nag; Aaron R Thorner; Matthew Ducar; Amy Noffsinger; Richard H Lash; Mark Redston; Scott L Carter; Jon M Davison; Adam J Bass
Journal:  Gastroenterology       Date:  2018-03-31       Impact factor: 22.682

8.  Identification of Prognostic Phenotypes of Esophageal Adenocarcinoma in 2 Independent Cohorts.

Authors:  Tarek Sawas; Sarah Killcoyne; Prasad G Iyer; Kenneth K Wang; Thomas C Smyrk; John B Kisiel; Yi Qin; David A Ahlquist; Anil K Rustgi; Rui J Costa; Moritz Gerstung; Rebecca C Fitzgerald; David A Katzka
Journal:  Gastroenterology       Date:  2018-08-27       Impact factor: 22.682

Review 9.  Next-Generation Liquid Biopsies: Embracing Data Science in Oncology.

Authors:  Y R Im; D W Y Tsui; L A Diaz; J C M Wan
Journal:  Trends Cancer       Date:  2020-12-13

Review 10.  [Influence of molecular pathology on oncological surgery of tumors of the upper gastrointestinal tract].

Authors:  Patrick S Plum; Alexander Quaas; Hakan Alakus; Christiane J Bruns
Journal:  Chirurg       Date:  2021-07-21       Impact factor: 0.955

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