Literature DB >> 28694259

High-efficiency non-mosaic CRISPR-mediated knock-in and indel mutation in F0 Xenopus.

Yetki Aslan1, Emmanuel Tadjuidje1, Aaron M Zorn1, Sang-Wook Cha2.   

Abstract

The revolution in CRISPR-mediated genome editing has enabled the mutation and insertion of virtually any DNA sequence, particularly in cell culture where selection can be used to recover relatively rare homologous recombination events. The efficient use of this technology in animal models still presents a number of challenges, including the time to establish mutant lines, mosaic gene editing in founder animals, and low homologous recombination rates. Here we report a method for CRISPR-mediated genome editing in Xenopus oocytes with homology-directed repair (HDR) that provides efficient non-mosaic targeted insertion of small DNA fragments (40-50 nucleotides) in 4.4-25.7% of F0 tadpoles, with germline transmission. For both CRISPR/Cas9-mediated HDR gene editing and indel mutation, the gene-edited F0 embryos are uniformly heterozygous, consistent with a mutation in only the maternal genome. In addition to efficient tagging of proteins in vivo, this HDR methodology will allow researchers to create patient-specific mutations for human disease modeling in Xenopus.
© 2017. Published by The Company of Biologists Ltd.

Entities:  

Keywords:  CRISPR/Cas9; F0; Homology-directed repair (HDR); Non-mosaic; Xenopus laevis; Xenopus tropicalis

Mesh:

Year:  2017        PMID: 28694259      PMCID: PMC5560047          DOI: 10.1242/dev.152967

Source DB:  PubMed          Journal:  Development        ISSN: 0950-1991            Impact factor:   6.868


  47 in total

1.  Efficient RNA/Cas9-mediated genome editing in Xenopus tropicalis.

Authors:  Xiaogang Guo; Tiejun Zhang; Zheng Hu; Yanqi Zhang; Zhaoying Shi; Qinhu Wang; Yan Cui; Fengqin Wang; Hui Zhao; Yonglong Chen
Journal:  Development       Date:  2014-01-08       Impact factor: 6.868

2.  Antisense oligodeoxyribonucleotide-directed cleavage of maternal mRNA in Xenopus oocytes and embryos.

Authors:  J Shuttleworth; G Matthews; L Dale; C Baker; A Colman
Journal:  Gene       Date:  1988-12-10       Impact factor: 3.688

Review 3.  CRISPR/Cas9-Directed Genome Editing of Cultured Cells.

Authors:  Luhan Yang; Joyce L Yang; Susan Byrne; Joshua Pan; George M Church
Journal:  Curr Protoc Mol Biol       Date:  2014-07-01

4.  Increasing the efficiency of homology-directed repair for CRISPR-Cas9-induced precise gene editing in mammalian cells.

Authors:  Van Trung Chu; Timm Weber; Benedikt Wefers; Wolfgang Wurst; Sandrine Sander; Klaus Rajewsky; Ralf Kühn
Journal:  Nat Biotechnol       Date:  2015-03-24       Impact factor: 54.908

5.  Generation of a Xenopus laevis F1 albino J strain by genome editing and oocyte host-transfer.

Authors:  Wil Ratzan; Rosalia Falco; Cristy Salanga; Matthew Salanga; Marko E Horb
Journal:  Dev Biol       Date:  2016-03-15       Impact factor: 3.582

6.  Isolation of single-base genome-edited human iPS cells without antibiotic selection.

Authors:  Yuichiro Miyaoka; Amanda H Chan; Luke M Judge; Jennie Yoo; Miller Huang; Trieu D Nguyen; Paweena P Lizarraga; Po-Lin So; Bruce R Conklin
Journal:  Nat Methods       Date:  2014-02-09       Impact factor: 28.547

7.  Efficient generation of knock-in transgenic zebrafish carrying reporter/driver genes by CRISPR/Cas9-mediated genome engineering.

Authors:  Yukiko Kimura; Yu Hisano; Atsuo Kawahara; Shin-ichi Higashijima
Journal:  Sci Rep       Date:  2014-10-08       Impact factor: 4.379

8.  Highly efficient gene knockout by injection of TALEN mRNAs into oocytes and host transfer in Xenopus laevis.

Authors:  Keisuke Nakajima; Yoshio Yaoita
Journal:  Biol Open       Date:  2015-01-16       Impact factor: 2.422

9.  Microhomology-mediated end-joining-dependent integration of donor DNA in cells and animals using TALENs and CRISPR/Cas9.

Authors:  Shota Nakade; Takuya Tsubota; Yuto Sakane; Satoshi Kume; Naoaki Sakamoto; Masanobu Obara; Takaaki Daimon; Hideki Sezutsu; Takashi Yamamoto; Tetsushi Sakuma; Ken-ichi T Suzuki
Journal:  Nat Commun       Date:  2014-11-20       Impact factor: 14.919

10.  Dynamic imaging of genomic loci in living human cells by an optimized CRISPR/Cas system.

Authors:  Baohui Chen; Luke A Gilbert; Beth A Cimini; Joerg Schnitzbauer; Wei Zhang; Gene-Wei Li; Jason Park; Elizabeth H Blackburn; Jonathan S Weissman; Lei S Qi; Bo Huang
Journal:  Cell       Date:  2013-12-19       Impact factor: 41.582

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  22 in total

1.  Tissue-Specific Gene Inactivation in Xenopus laevis: Knockout of lhx1 in the Kidney with CRISPR/Cas9.

Authors:  Bridget D DeLay; Mark E Corkins; Hannah L Hanania; Matthew Salanga; Jian Min Deng; Norihiro Sudou; Masanori Taira; Marko E Horb; Rachel K Miller
Journal:  Genetics       Date:  2017-11-29       Impact factor: 4.562

2.  Oocyte Host-Transfer and Maternal mRNA Depletion Experiments in Xenopus.

Authors:  Douglas W Houston
Journal:  Cold Spring Harb Protoc       Date:  2018-10-01

Review 3.  Speciation and adaptation research meets genome editing.

Authors:  Satoshi Ansai; Jun Kitano
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2022-05-30       Impact factor: 6.671

4.  Expanding the CRISPR/Cas genome-editing scope in Xenopus tropicalis.

Authors:  Zhaoying Shi; Hao Jiang; Guanghui Liu; Songyuan Shi; Xuan Zhang; Yonglong Chen
Journal:  Cell Biosci       Date:  2022-07-08       Impact factor: 9.584

Review 5.  Modulation of DNA double-strand break repair as a strategy to improve precise genome editing.

Authors:  Ujjayinee Ray; Sathees C Raghavan
Journal:  Oncogene       Date:  2020-09-03       Impact factor: 9.867

Review 6.  Aquatic models of human ciliary diseases.

Authors:  Mark E Corkins; Vanja Krneta-Stankic; Malgorzata Kloc; Rachel K Miller
Journal:  Genesis       Date:  2021-01-26       Impact factor: 2.487

Review 7.  SCR7, a potent cancer therapeutic agent and a biochemical inhibitor of nonhomologous DNA end-joining.

Authors:  Meghana Manjunath; Bibha Choudhary; Sathees C Raghavan
Journal:  Cancer Rep (Hoboken)       Date:  2021-01-26

Review 8.  Xenopus: Experimental Access to Cardiovascular Development, Regeneration Discovery, and Cardiovascular Heart-Defect Modeling.

Authors:  Stefan Hoppler; Frank L Conlon
Journal:  Cold Spring Harb Perspect Biol       Date:  2020-06-01       Impact factor: 9.708

Review 9.  Xenopus leads the way: Frogs as a pioneering model to understand the human brain.

Authors:  Cameron R T Exner; Helen Rankin Willsey
Journal:  Genesis       Date:  2020-12-27       Impact factor: 2.487

Review 10.  Xenopus as a platform for discovery of genes relevant to human disease.

Authors:  Valentyna Kostiuk; Mustafa K Khokha
Journal:  Curr Top Dev Biol       Date:  2021-04-23       Impact factor: 4.897

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