Literature DB >> 28677605

Supramolecular interactions in carboxylate and sulfonate salts of 2,6-diamino-4-chloropyrimidinium.

Marimuthu Mohana1, Packianathan Thomas Muthiah1, Ray J Butcher2.   

Abstract

Two new salts, namely 2,6-diamino-4-chloropyrimidinium 2-carboxy-3-nitrobenzoate, C4H6ClN4C8H4NO6-, (I), and 2,6-diamino-4-chloropyrimidinium p-toluenesulfonate monohydrate, C4H6ClN4C7H7O3SH2O, (II), have been synthesized and characterized by single-crystal X-ray diffraction. In both crystal structures, the N atom in the 1-position of the pyrimidine ring is protonated. In salt (I), the protonated N atom and the amino group of the pyrimidinium cation interact with the carboxylate group of the anion through N-H...O hydrogen bonds to form a heterosynthon with an R22(8) ring motif. In hydrated salt (II), the presence of the water molecule prevents the formation of the familiar R22(8) ring motif. Instead, an expanded ring [i.e. R32(8)] is formed involving the sulfonate group, the pyrimidinium cation and the water molecule. Both salts form a supramolecular homosynthon [R22(8) ring motif] through N-H...N hydrogen bonds. The molecular structures are further stabilized by π-π stacking, and C=O...π, C-H...O and C-H...Cl interactions.

Entities:  

Keywords:  crystal structure; heterosynthon; hydrogen bonds; ring motif; supramolecular homosynthon; π–π stacking interactions

Year:  2017        PMID: 28677605     DOI: 10.1107/S2053229617008798

Source DB:  PubMed          Journal:  Acta Crystallogr C Struct Chem        ISSN: 2053-2296            Impact factor:   1.172


  3 in total

1.  Supra-molecular inter-actions in 2,6-di-amino-4-chloro-pyrimidin-1-ium 5-chloro-salicylate and bis-(2,6-di-amino-4-chloro-pyrimidin-1-ium) naphthalene-1,5-di-sulfonate.

Authors:  Robert Swinton Darious; Packianathan Thomas Muthiah; Franc Perdih
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2018-01-26

2.  Crystal structure and Hirshfeld surface analysis of 5-acetyl-2-amino-4-(4-bromo-phen-yl)-6-oxo-1-phenyl-1,4,5,6-tetra-hydro-pyridine-3-carbo-nitrile.

Authors:  Ibrahim G Mamedov; Victor N Khrustalev; Mehmet Akkurt; Anton P Novikov; Ayten R Asgarova; Khatira N Aliyeva; Anzurat A Akobirshoeva
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2022-02-03

3.  Crystal structures and Hirshfeld surface analyses of 2-amino-4-(4-bromo-phen-yl)-6-oxo-1-phenyl-1,4,5,6-tetra-hydro-pyridine-3-carbo-nitrile hemi-hydrate and 1,6-di-amino-2-oxo-4-phenyl-1,2-di-hydro-pyridine-3,5-dicarbo-nitrile.

Authors:  Farid N Naghiyev; Victor N Khrustalev; Nikolai U Venskovsky; Tatiana A Tereshina; Ali N Khalilov; Mehmet Akkurt; Ajaya Bhattarai; İbrahim G Mamedov
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2022-07-26
  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.