Literature DB >> 28671682

A small-molecule allosteric inhibitor of Mycobacterium tuberculosis tryptophan synthase.

Samantha Wellington1,2,3, Partha P Nag1, Karolina Michalska4,5, Stephen E Johnston1, Robert P Jedrzejczak4,5, Virendar K Kaushik1, Anne E Clatworthy3, Noman Siddiqi6, Patrick McCarren1, Besnik Bajrami1, Natalia I Maltseva4, Senya Combs3, Stewart L Fisher1, Andrzej Joachimiak4,5,7, Stuart L Schreiber1,8, Deborah T Hung1,2,3.   

Abstract

New antibiotics with novel targets are greatly needed. Bacteria have numerous essential functions, but only a small fraction of such processes-primarily those involved in macromolecular synthesis-are inhibited by current drugs. Targeting metabolic enzymes has been the focus of recent interest, but effective inhibitors have been difficult to identify. We describe a synthetic azetidine derivative, BRD4592, that kills Mycobacterium tuberculosis (Mtb) through allosteric inhibition of tryptophan synthase (TrpAB), a previously untargeted, highly allosterically regulated enzyme. BRD4592 binds at the TrpAB α-β-subunit interface and affects multiple steps in the enzyme's overall reaction, resulting in inhibition not easily overcome by changes in metabolic environment. We show that TrpAB is required for the survival of Mtb and Mycobacterium marinum in vivo and that this requirement may be independent of an adaptive immune response. This work highlights the effectiveness of allosteric inhibition for targeting proteins that are naturally highly dynamic and that are essential in vivo, despite their apparent dispensability under in vitro conditions, and suggests a framework for the discovery of a next generation of allosteric inhibitors.

Entities:  

Mesh:

Substances:

Year:  2017        PMID: 28671682      PMCID: PMC6886523          DOI: 10.1038/nchembio.2420

Source DB:  PubMed          Journal:  Nat Chem Biol        ISSN: 1552-4450            Impact factor:   15.040


  56 in total

1.  A statistic for local intensity differences: robustness to anisotropy and pseudo-centering and utility for detecting twinning.

Authors:  Jennifer E Padilla; Todd O Yeates
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2003-06-27

Review 2.  High-throughput protein purification and quality assessment for crystallization.

Authors:  Youngchang Kim; Gyorgy Babnigg; Robert Jedrzejczak; William H Eschenfeldt; Hui Li; Natalia Maltseva; Catherine Hatzos-Skintges; Minyi Gu; Magdalena Makowska-Grzyska; Ruiying Wu; Hao An; Gekleng Chhor; Andrzej Joachimiak
Journal:  Methods       Date:  2011-08-31       Impact factor: 3.608

3.  General and condition-specific essential functions of Pseudomonas aeruginosa.

Authors:  Samuel A Lee; Larry A Gallagher; Metawee Thongdee; Benjamin J Staudinger; Soyeon Lippman; Pradeep K Singh; Colin Manoil
Journal:  Proc Natl Acad Sci U S A       Date:  2015-04-06       Impact factor: 11.205

Review 4.  Advances in the development of new tuberculosis drugs and treatment regimens.

Authors:  Alimuddin Zumla; Payam Nahid; Stewart T Cole
Journal:  Nat Rev Drug Discov       Date:  2013-05       Impact factor: 84.694

5.  Mutations in the contact region between the alpha and beta subunits of tryptophan synthase alter subunit interaction and intersubunit communication.

Authors:  R Rowlett; L H Yang; S A Ahmed; P McPhie; K H Jhee; E W Miles
Journal:  Biochemistry       Date:  1998-03-03       Impact factor: 3.162

6.  Mycobacterium marinum infection of adult zebrafish causes caseating granulomatous tuberculosis and is moderated by adaptive immunity.

Authors:  Laura E Swaim; Lynn E Connolly; Hannah E Volkman; Olivier Humbert; Donald E Born; Lalita Ramakrishnan
Journal:  Infect Immun       Date:  2006-11       Impact factor: 3.441

7.  The tryptophan synthase bienzyme complex transfers indole between the alpha- and beta-sites via a 25-30 A long tunnel.

Authors:  M F Dunn; V Aguilar; P Brzović; W F Drewe; K F Houben; C A Leja; M Roy
Journal:  Biochemistry       Date:  1990-09-18       Impact factor: 3.162

8.  Synthesis and characterization of allosteric probes of substrate channeling in the tryptophan synthase bienzyme complex.

Authors:  Huu Ngo; Rodney Harris; Novelle Kimmich; Patricia Casino; Dimitri Niks; Lars Blumenstein; Thomas Reinier Barends; Victor Kulik; Michael Weyand; Ilme Schlichting; Michael F Dunn
Journal:  Biochemistry       Date:  2007-06-09       Impact factor: 3.162

9.  Visualizing the tunnel in tryptophan synthase with crystallography: Insights into a selective filter for accommodating indole and rejecting water.

Authors:  Eduardo Hilario; Bethany G Caulkins; Yu-Ming M Huang; Wanli You; Chia-En A Chang; Leonard J Mueller; Michael F Dunn; Li Fan
Journal:  Biochim Biophys Acta       Date:  2015-12-17

10.  Inhibition of mycolic acid transport across the Mycobacterium tuberculosis plasma membrane.

Authors:  Anna E Grzegorzewicz; Ha Pham; Vijay A K B Gundi; Michael S Scherman; Elton J North; Tamara Hess; Victoria Jones; Veronica Gruppo; Sarah E M Born; Jana Korduláková; Sivagami Sundaram Chavadi; Christophe Morisseau; Anne J Lenaerts; Richard E Lee; Michael R McNeil; Mary Jackson
Journal:  Nat Chem Biol       Date:  2012-02-19       Impact factor: 15.040

View more
  43 in total

Review 1.  Chemical probes and drug leads from advances in synthetic planning and methodology.

Authors:  Christopher J Gerry; Stuart L Schreiber
Journal:  Nat Rev Drug Discov       Date:  2018-04-13       Impact factor: 84.694

2.  Antibacterial agents: New routes to tuberculosis treatment.

Authors:  Sarah Crunkhorn
Journal:  Nat Rev Drug Discov       Date:  2017-08-11       Impact factor: 84.694

3.  Allosteric regulation of menaquinone (vitamin K2) biosynthesis in the human pathogen Mycobacterium tuberculosis.

Authors:  Ghader Bashiri; Laura V Nigon; Ehab N M Jirgis; Ngoc Anh Thu Ho; Tamsyn Stanborough; Stephanie S Dawes; Edward N Baker; Esther M M Bulloch; Jodie M Johnston
Journal:  J Biol Chem       Date:  2020-02-06       Impact factor: 5.157

Review 4.  The Molecular Industrial Revolution: Automated Synthesis of Small Molecules.

Authors:  Melanie Trobe; Martin D Burke
Journal:  Angew Chem Int Ed Engl       Date:  2018-03-07       Impact factor: 15.336

5.  Drug development: Locking down metabolism.

Authors:  William R Bishai
Journal:  Nat Chem Biol       Date:  2017-08-18       Impact factor: 15.040

6.  Allosteric inhibitors of Mycobacterium tuberculosis tryptophan synthase.

Authors:  Karolina Michalska; Changsoo Chang; Natalia I Maltseva; Robert Jedrzejczak; Gregory T Robertson; Fabian Gusovsky; Patrick McCarren; Stuart L Schreiber; Partha P Nag; Andrzej Joachimiak
Journal:  Protein Sci       Date:  2020-01-20       Impact factor: 6.725

7.  Identification and structural characterization of a histidinol phosphate phosphatase from Mycobacterium tuberculosis.

Authors:  Bhavya Jha; Deepak Kumar; Arun Sharma; Abhisek Dwivedy; Ramandeep Singh; Bichitra Kumar Biswal
Journal:  J Biol Chem       Date:  2018-05-11       Impact factor: 5.157

Review 8.  The present state of the tuberculosis drug development pipeline.

Authors:  M Daben J Libardo; Helena Im Boshoff; Clifton E Barry
Journal:  Curr Opin Pharmacol       Date:  2018-08-23       Impact factor: 5.547

Review 9.  Role of Proline in Pathogen and Host Interactions.

Authors:  Shelbi L Christgen; Donald F Becker
Journal:  Antioxid Redox Signal       Date:  2018-02-02       Impact factor: 8.401

Review 10.  Metabolic principles of persistence and pathogenicity in Mycobacterium tuberculosis.

Authors:  Sabine Ehrt; Dirk Schnappinger; Kyu Y Rhee
Journal:  Nat Rev Microbiol       Date:  2018-08       Impact factor: 60.633

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.