Literature DB >> 28669588

GH62 arabinofuranosidases: Structure, function and applications.

Casper Wilkens1, Susan Andersen2, Claire Dumon3, Jean-Guy Berrin4, Birte Svensson5.   

Abstract

Motivated by industrial demands and ongoing scientific discoveries continuous efforts are made to identify and create improved biocatalysts dedicated to plant biomass conversion. α-1,2 and α-1,3 arabinofuranosyl specific α-l-arabinofuranosidases (EC 3.2.1.55) are debranching enzymes catalyzing hydrolytic release of α-l-arabinofuranosyl residues, which decorate xylan or arabinan backbones in lignocellulosic and pectin constituents of plant cell walls. The CAZy database classifies α-l-arabinofuranosidases in Glycoside Hydrolase (GH) families GH2, GH3, GH43, GH51, GH54 and GH62. Only GH62 contains exclusively α-l-arabinofuranosidases and these are of fungal and bacterial origin. Twenty-two GH62 enzymes out of 223 entries in the CAZy database have been characterized and very recently new knowledge was acquired with regard to crystal structures, substrate specificities, and phylogenetics, which overall provides novel insights into structure/function relationships of GH62. Overall GH62 α-l-arabinofuranosidases are believed to play important roles in nature by acting in synergy with several cell wall degrading enzymes and members of GH62 represent promising candidates for biotechnological improvements of biofuel production and in various biorefinery applications.
Copyright © 2017 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  (1)H NMR of product formation; Arabinoxylan; Arabinoxylooligosaccharides; Glycoside hydrolase family 62; Phylogenetics; Substrate specificity; Surface binding site; Three-dimensional structures; l-Arabinan; α-l-Arabinofuranosidase

Mesh:

Substances:

Year:  2017        PMID: 28669588     DOI: 10.1016/j.biotechadv.2017.06.005

Source DB:  PubMed          Journal:  Biotechnol Adv        ISSN: 0734-9750            Impact factor:   14.227


  14 in total

1.  High-Throughput Generation of Product Profiles for Arabinoxylan-Active Enzymes from Metagenomes.

Authors:  Maria João Maurício da Fonseca; Zachary Armstrong; Stephen G Withers; Yves Briers
Journal:  Appl Environ Microbiol       Date:  2020-11-10       Impact factor: 4.792

2.  Insights into the xylan degradation system of Cellulomonas sp. B6: biochemical characterization of rCsXyn10A and rCsAbf62A.

Authors:  Mercedes María Garrido; Florencia Elizabeth Piccinni; Malena Landoni; María Jesús Peña; Juliana Topalian; Alicia Couto; Sonia Alejandra Wirth; Breeanna Rae Urbanowicz; Eleonora Campos
Journal:  Appl Microbiol Biotechnol       Date:  2022-07-08       Impact factor: 5.560

3.  The mechanism by which a distinguishing arabinofuranosidase can cope with internal di-substitutions in arabinoxylans.

Authors:  Camila Ramos Dos Santos; Priscila Oliveira de Giuseppe; Flávio Henrique Moreira de Souza; Letícia Maria Zanphorlin; Mariane Noronha Domingues; Renan Augusto Siqueira Pirolla; Rodrigo Vargas Honorato; Celisa Caldana Costa Tonoli; Mariana Abrahão Bueno de Morais; Vanesa Peixoto de Matos Martins; Lucas Miranda Fonseca; Fernanda Büchli; Paulo Sergio Lopes de Oliveira; Fábio Cesar Gozzo; Mário Tyago Murakami
Journal:  Biotechnol Biofuels       Date:  2018-08-11       Impact factor: 6.040

4.  Characterisation of three novel α-L-arabinofuranosidases from a compost metagenome.

Authors:  Brent Fortune; Sizwe Mhlongo; Leonardo Joaquim van Zyl; Robert Huddy; Mariette Smart; Marla Trindade
Journal:  BMC Biotechnol       Date:  2019-04-18       Impact factor: 2.563

5.  The xyl-doc gene cluster of Ruminiclostridium cellulolyticum encodes GH43- and GH62-α-l-arabinofuranosidases with complementary modes of action.

Authors:  Mohamed Mroueh; Marion Aruanno; Romain Borne; Pascale de Philip; Henri-Pierre Fierobe; Chantal Tardif; Sandrine Pagès
Journal:  Biotechnol Biofuels       Date:  2019-06-10       Impact factor: 6.040

6.  A GH51 α-L-arabinofuranosidase from Talaromyces leycettanus strain JCM12802 that selectively drives synergistic lignocellulose hydrolysis.

Authors:  Tao Tu; Xiaoli Li; Kun Meng; Yingguo Bai; Yuan Wang; Zhenxing Wang; Bin Yao; Huiying Luo
Journal:  Microb Cell Fact       Date:  2019-08-19       Impact factor: 5.328

7.  Characterization and functional analysis of two novel thermotolerant α-L-arabinofuranosidases belonging to glycoside hydrolase family 51 from Thielavia terrestris and family 62 from Eupenicillium parvum.

Authors:  Liangkun Long; Lu Sun; Qunying Lin; Shaojun Ding; Franz J St John
Journal:  Appl Microbiol Biotechnol       Date:  2020-09-03       Impact factor: 4.813

8.  Cloning and expression of a novel α-1,3-arabinofuranosidase from Penicillium oxalicum sp. 68.

Authors:  Yanbo Hu; Xuecui Yan; Han Zhang; Jiaqi Liu; Feng Luo; Yingying Cui; Weiyang Wang; Yifa Zhou
Journal:  AMB Express       Date:  2018-04-02       Impact factor: 3.298

9.  Structure of a Talaromyces pinophilus GH62 arabinofuranosidase in complex with AraDNJ at 1.25 Å resolution.

Authors:  Olga V Moroz; Lukasz F Sobala; Elena Blagova; Travis Coyle; Wei Peng; Kristian B R Mørkeberg Krogh; Keith A Stubbs; Keith S Wilson; Gideon J Davies
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2018-07-26       Impact factor: 1.056

10.  A Glycoside Hydrolase Family 62 A-L-Arabinofuranosidase from Trichoderma Reesei and Its Applicable Potential during Mashing.

Authors:  Junyong Sun; Feng Xu; Jian Lu
Journal:  Foods       Date:  2020-03-19
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