Literature DB >> 28649174

A Multitaper, Causal Decomposition for Stochastic, Multivariate Time Series: Application to High-Frequency Calcium Imaging Data.

Andrew T Sornborger1, James D Lauderdale2.   

Abstract

Neural data analysis has increasingly incorporated causal information to study circuit connectivity. Dimensional reduction forms the basis of most analyses of large multivariate time series. Here, we present a new, multitaper-based decomposition for stochastic, multivariate time series that acts on the covariance of the time series at all lags, C(τ), as opposed to standard methods that decompose the time series, X(t), using only information at zero-lag. In both simulated and neural imaging examples, we demonstrate that methods that neglect the full causal structure may be discarding important dynamical information in a time series.

Entities:  

Keywords:  Causality; Dimension Reduction; Matrix Decomposition; Multitaper Methods; Multivariate Time Series; Neural Imaging; Spectral Analysis

Year:  2017        PMID: 28649174      PMCID: PMC5479311          DOI: 10.1109/ACSSC.2016.7869531

Source DB:  PubMed          Journal:  Conf Rec Asilomar Conf Signals Syst Comput        ISSN: 1058-6393


  9 in total

1.  Robust smoothness estimation in statistical parametric maps using standardized residuals from the general linear model.

Authors:  S J Kiebel; J B Poline; K J Friston; A P Holmes; K J Worsley
Journal:  Neuroimage       Date:  1999-12       Impact factor: 6.556

2.  Independent component analysis: algorithms and applications.

Authors:  A Hyvärinen; E Oja
Journal:  Neural Netw       Date:  2000 May-Jun

3.  A multiscale analysis of the temporal characteristics of resting-state fMRI data.

Authors:  Cheolwoo Park; Nicole A Lazar; Jeongyoun Ahn; Andrew Sornborger
Journal:  J Neurosci Methods       Date:  2010-09-09       Impact factor: 2.390

4.  Estimating weak ratiometric signals in imaging data. II. Meta-analysis with multiple, dual-channel datasets.

Authors:  Andrew Sornborger; Josef Broder; Anirban Majumder; Ganesh Srinivasamoorthy; Erika Porter; Sean S Reagin; Charles Keith; James D Lauderdale
Journal:  J Opt Soc Am A Opt Image Sci Vis       Date:  2008-09       Impact factor: 2.129

5.  Analysis of fMRI data by blind separation into independent spatial components.

Authors:  M J McKeown; S Makeig; G G Brown; T P Jung; S S Kindermann; A J Bell; T J Sejnowski
Journal:  Hum Brain Mapp       Date:  1998       Impact factor: 5.038

6.  Representation of spatial frequency and orientation in the visual cortex.

Authors:  R M Everson; A K Prashanth; M Gabbay; B W Knight; L Sirovich; E Kaplan
Journal:  Proc Natl Acad Sci U S A       Date:  1998-07-07       Impact factor: 11.205

7.  Automated quantification of neuronal networks and single-cell calcium dynamics using calcium imaging.

Authors:  Tapan P Patel; Karen Man; Bonnie L Firestein; David F Meaney
Journal:  J Neurosci Methods       Date:  2015-01-25       Impact factor: 2.390

8.  A multivariate, multitaper approach to detecting and estimating harmonic response in cortical optical imaging data.

Authors:  A T Sornborger; T Yokoo
Journal:  J Neurosci Methods       Date:  2011-09-29       Impact factor: 2.390

9.  Mapping Functional Connectivity between Neuronal Ensembles with Larval Zebrafish Transgenic for a Ratiometric Calcium Indicator.

Authors:  Louis Tao; James D Lauderdale; Andrew T Sornborger
Journal:  Front Neural Circuits       Date:  2011-02-22       Impact factor: 3.492

  9 in total

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