Literature DB >> 28639222

Molecular and biological characterization of a new Tomato mild yellow leaf curl Aragua virus strain producing severe symptoms in tomato.

Gustavo Romay1, Dorys T Chirinos2,3, Francis Geraud-Pouey2, Annika Gillis4, Jacques Mahillon4, Cécile Desbiez5, Claude Bragard6.   

Abstract

Tomato mild yellow leaf curl Aragua virus (ToMYLCV) is a begomovirus first reported infecting tomato (Solanum lycopersicum) and milkweed (Euphorbia heterophylla) in Venezuela. In this study, a ToMYLCV isolate (Zulia-219) was completely sequenced and its host range was evaluated. The DNA-A and DNA-B components of isolate Zulia-219 showed 93 and 85% nucleotide sequence identity with the respective counterparts of the ToMYLCV type strain. According to current demarcation criteria for begomovirus species, Zulia-219 is a new strain of ToMYLCV. Interestingly, tomato plants inoculated with ToMYLCV Zulia-219 displayed severe symptoms, including severe chlorotic leaf curling, in contrast to mild symptoms associated with the type strain of this begomovirus. These results indicate potential risks associated with this new ToMYLCV strain for tomato production in Venezuela.

Entities:  

Keywords:  Begomovirus; Experimental host range; Geminiviridae; Solanaceae; Tomato crop

Mesh:

Substances:

Year:  2017        PMID: 28639222     DOI: 10.1007/s11262-017-1478-3

Source DB:  PubMed          Journal:  Virus Genes        ISSN: 0920-8569            Impact factor:   2.332


  8 in total

1.  A simple method for cloning the complete begomovirus genome using the bacteriophage phi29 DNA polymerase.

Authors:  Alice K Inoue-Nagata; Leonardo C Albuquerque; Wesley B Rocha; Tatsuya Nagata
Journal:  J Virol Methods       Date:  2004-03-15       Impact factor: 2.014

2.  MUSCLE: multiple sequence alignment with high accuracy and high throughput.

Authors:  Robert C Edgar
Journal:  Nucleic Acids Res       Date:  2004-03-19       Impact factor: 16.971

3.  Revision of Begomovirus taxonomy based on pairwise sequence comparisons.

Authors:  Judith K Brown; F Murilo Zerbini; Jesús Navas-Castillo; Enrique Moriones; Roberto Ramos-Sobrinho; José C F Silva; Elvira Fiallo-Olivé; Rob W Briddon; Cecilia Hernández-Zepeda; Ali Idris; V G Malathi; Darren P Martin; Rafael Rivera-Bustamante; Shigenori Ueda; Arvind Varsani
Journal:  Arch Virol       Date:  2015-04-18       Impact factor: 2.574

4.  Molecular characterization of a new begomovirus that infects Euphorbia heterophylla and Solanum lycopersicum in Venezuela.

Authors:  Karla Zambrano; Thaly Fernández-Rodríguez; Edgloris Marys
Journal:  Arch Virol       Date:  2011-11-04       Impact factor: 2.574

5.  Use of the asymmetric polymerase chain reaction and DNA sequencing to determine genetic variability of bean golden mosaic geminivirus in the Dominican Republic.

Authors:  R L Gilbertson; M R Rojas; D R Russell; D P Maxwell
Journal:  J Gen Virol       Date:  1991-11       Impact factor: 3.891

6.  SDT: a virus classification tool based on pairwise sequence alignment and identity calculation.

Authors:  Brejnev Muhizi Muhire; Arvind Varsani; Darren Patrick Martin
Journal:  PLoS One       Date:  2014-09-26       Impact factor: 3.240

7.  RDP4: Detection and analysis of recombination patterns in virus genomes.

Authors:  Darren P Martin; Ben Murrell; Michael Golden; Arjun Khoosal; Brejnev Muhire
Journal:  Virus Evol       Date:  2015-05-26

8.  Base-By-Base version 2: single nucleotide-level analysis of whole viral genome alignments.

Authors:  William Hillary; Song-Han Lin; Chris Upton
Journal:  Microb Inform Exp       Date:  2011-06-14
  8 in total

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