Literature DB >> 14738990

A simple method for cloning the complete begomovirus genome using the bacteriophage phi29 DNA polymerase.

Alice K Inoue-Nagata1, Leonardo C Albuquerque, Wesley B Rocha, Tatsuya Nagata.   

Abstract

The bacteriophage phiDNA polymerase amplifies circular DNA in a rolling circle amplification mechanism. This characteristic was applied to amplify and clone the complete circular DNA genome of a begomovirus. Total DNA extracted from infected tissue was used as the template of an amplification reaction using the commercial kit TempliPhi (Amersham Biosciences). The amplified DNA could be used for direct sequencing and was cloned after digestion with a single cutting restriction endonuclease. The use of this enzyme simplified the cloning steps and increased the cloning efficiency of the complete genome of a circular plant DNA virus.

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Year:  2004        PMID: 14738990     DOI: 10.1016/j.jviromet.2003.11.015

Source DB:  PubMed          Journal:  J Virol Methods        ISSN: 0166-0934            Impact factor:   2.014


  74 in total

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3.  Tomato yellow vein streak virus and Tomato golden vein virus: a reappraisal of the classification status of two South American Begomovirus species based upon genome-wide pairwise identity of multiple isolates.

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4.  An efficient in vitro-inoculation method for Tomato yellow leaf curl virus.

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Journal:  Virol J       Date:  2010-02-23       Impact factor: 4.099

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Authors:  Carolina S Rocha; Gloria P Castillo-Urquiza; Alison T M Lima; Fábio N Silva; Cesar A D Xavier; Braz T Hora-Júnior; José E A Beserra-Júnior; Antonio W O Malta; Darren P Martin; Arvind Varsani; Poliane Alfenas-Zerbini; Eduardo S G Mizubuti; F Murilo Zerbini
Journal:  J Virol       Date:  2013-03-13       Impact factor: 5.103

8.  Characterization of tomato yellow vein streak virus, a begomovirus from Brazil.

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Journal:  Virus Genes       Date:  2009-11-24       Impact factor: 2.332

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Journal:  Virol J       Date:  2009-07-16       Impact factor: 4.099

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Authors:  Arvind Varsani; Aderito L Monjane; Lara Donaldson; Sunday Oluwafemi; Innocent Zinga; Ephrem K Komba; Didier Plakoutene; Noella Mandakombo; Joseph Mboukoulida; Silla Semballa; Rob W Briddon; Peter G Markham; Jean-Michel Lett; Pierre Lefeuvre; Edward P Rybicki; Darren P Martin
Journal:  Virol J       Date:  2009-11-10       Impact factor: 4.099

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