Literature DB >> 28633304

Molecular aspects of the biophysical CO2-concentrating mechanism and its regulation in marine diatoms.

Yoshinori Tsuji1, Kensuke Nakajima1, Yusuke Matsuda1.   

Abstract

Diatoms operate a CO2-concentrating mechanism (CCM) that drives upwards of 20% of annual global primary production. Recent progress in CCM research in the marine pennate diatom Phaeodactylum tricornutum revealed that this diatom directly takes up HCO3- from seawater through low-CO2-inducible plasma membrane HCO3- transporters, which belong to the solute carrier (SLC) 4 family. Apart from this, studies of carbonic anhydrases (CAs) in diatoms have revealed considerable diversity in classes and localization among species. This strongly suggests that the CA systems, which control permeability and flux of dissolved inorganic carbon (DIC) by catalysing reversible CO2 hydration, have evolved from diverse origins. Of particular interest is the occurrence of low-CO2-inducible external CAs in the centric marine diatom Thalassiosira pseudonana, offering a strategy of CA-catalysed initial CO2 entry via passive diffusion, contrasting with active DIC transport in P. tricornutum. Molecular mechanisms to transport DIC across chloroplast envelopes are likely also through specific HCO3- transporters, although details have yet to be elucidated. Furthermore, recent discovery of a luminal θ-CA in the diatom thylakoid implied a common strategy in the mechanism to supply CO2 to RubisCO in the pyrenoid, which is conserved among green algae and some heterokontophytes. These results strongly suggest an occurrence of convergent coevolution between the pyrenoid and thylakoid membrane in aquatic photosynthesis.
© The Author 2017. Published by Oxford University Press on behalf of the Society for Experimental Biology. All rights reserved. For permissions, please email: journals.permissions@oup.com.

Entities:  

Keywords:  CO2-concentrating mechanism; Carbonic anhydrase; HCO3− transport; marine diatom; photosynthesis; pyrenoid; solute carrier 4 (SLC4)

Mesh:

Substances:

Year:  2017        PMID: 28633304     DOI: 10.1093/jxb/erx173

Source DB:  PubMed          Journal:  J Exp Bot        ISSN: 0022-0957            Impact factor:   6.992


  10 in total

1.  The intracellular distribution of inorganic carbon fixing enzymes does not support the presence of a C4 pathway in the diatom Phaeodactylum tricornutum.

Authors:  Daniela Ewe; Masaaki Tachibana; Sae Kikutani; Ansgar Gruber; Carolina Río Bártulos; Grzegorz Konert; Aaron Kaplan; Yusuke Matsuda; Peter G Kroth
Journal:  Photosynth Res       Date:  2018-03-23       Impact factor: 3.573

Review 2.  Diatom Molecular Research Comes of Age: Model Species for Studying Phytoplankton Biology and Diversity.

Authors:  Angela Falciatore; Marianne Jaubert; Jean-Pierre Bouly; Benjamin Bailleul; Thomas Mock
Journal:  Plant Cell       Date:  2019-12-18       Impact factor: 11.277

3.  Characterization of a CO2-Concentrating Mechanism with Low Sodium Dependency in the Centric Diatom Chaetoceros gracilis.

Authors:  Yoshinori Tsuji; George Kusi-Appiah; Noriko Kozai; Yuri Fukuda; Takashi Yamano; Hideya Fukuzawa
Journal:  Mar Biotechnol (NY)       Date:  2021-06-09       Impact factor: 3.619

4.  Overcoming adversity through diversity: aquatic carbon concentrating mechanisms.

Authors:  Howard Griffiths; Moritz T Meyer; Rosalind E M Rickaby
Journal:  J Exp Bot       Date:  2017-06-01       Impact factor: 6.992

5.  Transcriptomic and proteomic responses to very low CO2 suggest multiple carbon concentrating mechanisms in Nannochloropsis oceanica.

Authors:  Li Wei; Mohamed El Hajjami; Chen Shen; Wuxin You; Yandu Lu; Jing Li; Xiaoyan Jing; Qiang Hu; Wenxu Zhou; Ansgar Poetsch; Jian Xu
Journal:  Biotechnol Biofuels       Date:  2019-06-28       Impact factor: 6.040

6.  Proteomic and biochemical responses to different concentrations of CO2 suggest the existence of multiple carbon metabolism strategies in Phaeodactylum tricornutum.

Authors:  Songcui Wu; Wenhui Gu; Shuao Jia; Lepu Wang; Lijun Wang; Xuehua Liu; Lu Zhou; Aiyou Huang; Guangce Wang
Journal:  Biotechnol Biofuels       Date:  2021-12-14       Impact factor: 6.040

7.  A metabolic, phylogenomic and environmental atlas of diatom plastid transporters from the model species Phaeodactylum.

Authors:  Shun Liu; Mattia Storti; Giovanni Finazzi; Chris Bowler; Richard G Dorrell
Journal:  Front Plant Sci       Date:  2022-09-22       Impact factor: 6.627

Review 8.  α-CAs from Photosynthetic Organisms.

Authors:  Emma Langella; Anna Di Fiore; Vincenzo Alterio; Simona Maria Monti; Giuseppina De Simone; Katia D'Ambrosio
Journal:  Int J Mol Sci       Date:  2022-10-10       Impact factor: 6.208

Review 9.  Insights on the Functions and Ecophysiological Relevance of the Diverse Carbonic Anhydrases in Microalgae.

Authors:  Erik L Jensen; Stephen C Maberly; Brigitte Gontero
Journal:  Int J Mol Sci       Date:  2020-04-22       Impact factor: 5.923

10.  Diploid genomic architecture of Nitzschia inconspicua, an elite biomass production diatom.

Authors:  Aaron Oliver; Sheila Podell; Agnieszka Pinowska; Jesse C Traller; Sarah R Smith; Ryan McClure; Alex Beliaev; Pavlo Bohutskyi; Eric A Hill; Ariel Rabines; Hong Zheng; Lisa Zeigler Allen; Alan Kuo; Igor V Grigoriev; Andrew E Allen; David Hazlebeck; Eric E Allen
Journal:  Sci Rep       Date:  2021-08-02       Impact factor: 4.379

  10 in total

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