Literature DB >> 28631109

Increasing the reach of forensic genetics with massively parallel sequencing.

Bruce Budowle1,2, Sarah E Schmedes3, Frank R Wendt3.   

Abstract

The field of forensic genetics has made great strides in the analysis of biological evidence related to criminal and civil matters. More so, the discipline has set a standard of performance and quality in the forensic sciences. The advent of massively parallel sequencing will allow the field to expand its capabilities substantially. This review describes the salient features of massively parallel sequencing and how it can impact forensic genetics. The features of this technology offer increased number and types of genetic markers that can be analyzed, higher throughput of samples, and the capability of targeting different organisms, all by one unifying methodology. While there are many applications, three are described where massively parallel sequencing will have immediate impact: molecular autopsy, microbial forensics and differentiation of monozygotic twins. The intent of this review is to expose the forensic science community to the potential enhancements that have or are soon to arrive and demonstrate the continued expansion the field of forensic genetics and its service in the investigation of legal matters.

Keywords:  Forensic genetics; Massively parallel sequencing; Microbial forensics; Molecular autopsy; Monozygotic twins

Mesh:

Substances:

Year:  2017        PMID: 28631109     DOI: 10.1007/s12024-017-9882-5

Source DB:  PubMed          Journal:  Forensic Sci Med Pathol        ISSN: 1547-769X            Impact factor:   2.007


  114 in total

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Journal:  Trends Pharmacol Sci       Date:  2004-04       Impact factor: 14.819

2.  FDSTools: A software package for analysis of massively parallel sequencing data with the ability to recognise and correct STR stutter and other PCR or sequencing noise.

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Journal:  Forensic Sci Int Genet       Date:  2016-11-27       Impact factor: 4.882

3.  My-Forensic-Loci-queries (MyFLq) framework for analysis of forensic STR data generated by massive parallel sequencing.

Authors:  Christophe Van Neste; Mado Vandewoestyne; Wim Van Criekinge; Dieter Deforce; Filip Van Nieuwerburgh
Journal:  Forensic Sci Int Genet       Date:  2013-10-31       Impact factor: 4.882

4.  Effects of the Ion PGM™ Hi-Q™ sequencing chemistry on sequence data quality.

Authors:  Jennifer D Churchill; Jonathan L King; Ranajit Chakraborty; Bruce Budowle
Journal:  Int J Legal Med       Date:  2016-03-30       Impact factor: 2.686

Review 5.  Expansion of Microbial Forensics.

Authors:  Sarah E Schmedes; Antti Sajantila; Bruce Budowle
Journal:  J Clin Microbiol       Date:  2016-02-24       Impact factor: 5.948

6.  Infectious complications in drug addicts: seven-year review of 269 hospitalized narcotics abusers in Switzerland.

Authors:  C Scheidegger; W Zimmerli
Journal:  Rev Infect Dis       Date:  1989 May-Jun

Review 7.  The role of cytochrome P450 enzymes in endogenous signalling pathways and environmental carcinogenesis.

Authors:  Daniel W Nebert; Timothy P Dalton
Journal:  Nat Rev Cancer       Date:  2006-12       Impact factor: 60.716

8.  Defective N-oxidation of sparteine in man: a new pharmacogenetic defect.

Authors:  M Eichelbaum; N Spannbrucker; B Steincke; H J Dengler
Journal:  Eur J Clin Pharmacol       Date:  1979-09       Impact factor: 2.953

9.  An overview to the investigative approach to species testing in wildlife forensic science.

Authors:  Adrian Linacre; Shanan S Tobe
Journal:  Investig Genet       Date:  2011-01-13

10.  Revised Estimates for the Number of Human and Bacteria Cells in the Body.

Authors:  Ron Sender; Shai Fuchs; Ron Milo
Journal:  PLoS Biol       Date:  2016-08-19       Impact factor: 8.029

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Journal:  Nat Rev Cancer       Date:  2019-09-13       Impact factor: 60.716

2.  Massively parallel sequencing of Cannabis sativa chloroplast hotspots for forensic typing.

Authors:  Madeline G Roman; Ryan Gutierrez; Rachel Houston
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Review 3.  Massively parallel sequencing techniques for forensics: A review.

Authors:  Brigitte Bruijns; Roald Tiggelaar; Han Gardeniers
Journal:  Electrophoresis       Date:  2018-08-22       Impact factor: 3.535

  3 in total

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