Literature DB >> 28625980

Functional Analysis of a Novel β-(1,3)-Glucanase from Corallococcus sp. Strain EGB Containing a Fascin-Like Module.

Jie Zhou1, Zhoukun Li1, Jiale Wu1, Lifeng Li1, Ding Li1, Xianfeng Ye1, Xue Luo1, Yan Huang1, Zhongli Cui2, Hui Cao2.   

Abstract

A novel β-(1,3)-glucanase gene designated lamC, cloned from Corallococcus sp. strain EGB, contains a fascin-like module and a glycoside hydrolase family 16 (GH16) catalytic module. LamC displays broad hydrolytic activity toward various polysaccharides. Analysis of the hydrolytic products revealed that LamC is an exo-acting enzyme on β-(1,3)(1,3)- and β-(1,6)-linked glucan substrates and an endo-acting enzyme on β-(1,4)-linked glucan and xylan substrates. Site-directed mutagenesis of conserved catalytic Glu residues (E304A and E309A) demonstrated that these activities were derived from the same active site. Excision of the fascin-like module resulted in decreased activity toward β-(1,3)(1,3)-linked glucans. The carbohydrate-binding assay showed that the fascin-like module was a novel β-(1,3)-linked glucan-binding module. The functional characterization of the fascin-like module and catalytic module will help us better understand these enzymes and modules.IMPORTANCE In this report of a bacterial β-(1,3)(1,3)-glucanase containing a fascin-like module, we reveal the β-(1,3)(1,3)-glucan-binding function of the fascin-like module present in the N terminus of LamC. LamC displays exo-β-(1,3)/(1,6)-glucanase and endo-β-(1,4)-glucanase/xylanase activities with a single catalytic domain. Thus, LamC was identified as a novel member of the GH16 family.
Copyright © 2017 American Society for Microbiology.

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Keywords:  Corallococcus sp. EGB; GH16; broad substrate linkage specificity; fascin-like module; β-(1,3)-glucanase

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Year:  2017        PMID: 28625980      PMCID: PMC5541203          DOI: 10.1128/AEM.01016-17

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  45 in total

1.  Glycoside hydrolases and glycosyltransferases. Families, modules, and implications for genomics.

Authors:  B Henrissat; G J Davies
Journal:  Plant Physiol       Date:  2000-12       Impact factor: 8.340

2.  Crystal structure of a family 16 endoglucanase from the hyperthermophile Pyrococcus furiosus--structural basis of substrate recognition.

Authors:  Andrea Ilari; Annarita Fiorillo; Sebastiana Angelaccio; Rita Florio; Roberta Chiaraluce; John van der Oost; Valerio Consalvi
Journal:  FEBS J       Date:  2008-01-16       Impact factor: 5.542

3.  Interaction of polysaccharides with the N-terminal cellulose-binding domain of Cellulomonas fimi CenC. 1. Binding specificity and calorimetric analysis.

Authors:  P Tomme; A L Creagh; D G Kilburn; C A Haynes
Journal:  Biochemistry       Date:  1996-11-05       Impact factor: 3.162

4.  Characterization of a broad-specificity β-glucanase acting on β-(1,3)-, β-(1,4)-, and β-(1,6)-glucans that defines a new glycoside hydrolase family.

Authors:  Mickael Lafond; David Navarro; Mireille Haon; Marie Couturier; Jean-Guy Berrin
Journal:  Appl Environ Microbiol       Date:  2012-09-28       Impact factor: 4.792

5.  Distinct roles of four gelsolin-like domains of Caenorhabditis elegans gelsolin-like protein-1 in actin filament severing, barbed end capping, and phosphoinositide binding.

Authors:  Zhongmei Liu; Tuula Klaavuniemi; Shoichiro Ono
Journal:  Biochemistry       Date:  2010-05-25       Impact factor: 3.162

6.  New families in the classification of glycosyl hydrolases based on amino acid sequence similarities.

Authors:  B Henrissat; A Bairoch
Journal:  Biochem J       Date:  1993-08-01       Impact factor: 3.857

7.  The X6 "thermostabilizing" domains of xylanases are carbohydrate-binding modules: structure and biochemistry of the Clostridium thermocellum X6b domain.

Authors:  S J Charnock; D N Bolam; J P Turkenburg; H J Gilbert; L M Ferreira; G J Davies; C M Fontes
Journal:  Biochemistry       Date:  2000-05-02       Impact factor: 3.162

8.  Isolation and biochemical characterization of an endo-1,3-beta-glucanase from Streptomyces sioyaensis containing a C-terminal family 6 carbohydrate-binding module that binds to 1,3-beta-glucan.

Authors:  Tang-Yao Hong; Chun-Wei Cheng; Jenn-Wen Huang; Menghsiao Meng
Journal:  Microbiology (Reading)       Date:  2002-04       Impact factor: 2.777

9.  Cloning and sequencing of a Rhodothermus marinus gene, bglA, coding for a thermostable beta-glucanase and its expression in Escherichia coli.

Authors:  R Spilliaert; G O Hreggvidsson; J K Kristjansson; G Eggertsson; A Palsdottir
Journal:  Eur J Biochem       Date:  1994-09-15

10.  CDD: conserved domains and protein three-dimensional structure.

Authors:  Aron Marchler-Bauer; Chanjuan Zheng; Farideh Chitsaz; Myra K Derbyshire; Lewis Y Geer; Renata C Geer; Noreen R Gonzales; Marc Gwadz; David I Hurwitz; Christopher J Lanczycki; Fu Lu; Shennan Lu; Gabriele H Marchler; James S Song; Narmada Thanki; Roxanne A Yamashita; Dachuan Zhang; Stephen H Bryant
Journal:  Nucleic Acids Res       Date:  2012-11-28       Impact factor: 16.971

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  2 in total

1.  A novel outer membrane β-1,6-glucanase is deployed in the predation of fungi by myxobacteria.

Authors:  Zhoukun Li; Xianfeng Ye; Muxing Liu; Chengyao Xia; Lei Zhang; Xue Luo; Ting Wang; Yue Chen; Yuqiang Zhao; Yan Qiao; Yan Huang; Hui Cao; Xiangyang Gu; Jiaqin Fan; Zhongli Cui; Zhengguang Zhang
Journal:  ISME J       Date:  2019-05-07       Impact factor: 10.302

2.  Whole-Genome Sequencing of Corallococcus sp. Strain EGB Reveals the Genetic Determinants Linking Taxonomy and Predatory Behavior.

Authors:  Yuqiang Zhao; Yanxin Wang; Chengyao Xia; Xu Li; Xianfeng Ye; Qiwen Fan; Yan Huang; Zhoukun Li; Cancan Zhu; Zhongli Cui
Journal:  Genes (Basel)       Date:  2021-09-15       Impact factor: 4.096

  2 in total

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