Literature DB >> 28618333

DNA polymerases and biotechnological applications.

Joos Aschenbrenner1, Andreas Marx2.   

Abstract

A multitude of biotechnological techniques used in basic research as well as in clinical diagnostics on an everyday basis depend on DNA polymerases and their intrinsic capability to replicate DNA strands with astoundingly high fidelity. Applications with fundamental importance to modern molecular biology, including the polymerase chain reaction and DNA sequencing, would not be feasible without the advances made in characterizing these enzymes over the course of the last 60 years. Nonetheless, the still growing application scope of DNA polymerases necessitates the identification of novel enzymes with tailor-made properties. In the recent past, DNA polymerases optimized for diverse PCR and sequencing applications as well as enzymes that accept a variety of unnatural substrates for the synthesis and reverse transcription of modified nucleic acids have been developed.
Copyright © 2017 Elsevier Ltd. All rights reserved.

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Year:  2017        PMID: 28618333     DOI: 10.1016/j.copbio.2017.04.005

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  13 in total

1.  Fluorescence-Activated Droplet Sorting for Single-Cell Directed Evolution.

Authors:  Derek Vallejo; Ali Nikoomanzar; Brian M Paegel; John C Chaput
Journal:  ACS Synth Biol       Date:  2019-05-23       Impact factor: 5.110

2.  How a B family DNA polymerase has been evolved to copy RNA.

Authors:  Woo Suk Choi; Peng He; Arti Pothukuchy; Jimmy Gollihar; Andrew D Ellington; Wei Yang
Journal:  Proc Natl Acad Sci U S A       Date:  2020-08-17       Impact factor: 11.205

Review 3.  Engineering Polymerases for New Functions.

Authors:  Timothy A Coulther; Hannah R Stern; Penny J Beuning
Journal:  Trends Biotechnol       Date:  2019-04-16       Impact factor: 19.536

4.  Pyrophosphate hydrolysis is an intrinsic and critical step of the DNA synthesis reaction.

Authors:  Jithesh Kottur; Deepak T Nair
Journal:  Nucleic Acids Res       Date:  2018-07-06       Impact factor: 16.971

5.  Crystal structures of a natural DNA polymerase that functions as an XNA reverse transcriptase.

Authors:  Lynnette N Jackson; Nicholas Chim; Changhua Shi; John C Chaput
Journal:  Nucleic Acids Res       Date:  2019-07-26       Impact factor: 16.971

6.  Structural Studies of HNA Substrate Specificity in Mutants of an Archaeal DNA Polymerase Obtained by Directed Evolution.

Authors:  Camille Samson; Pierre Legrand; Mustafa Tekpinar; Jef Rozenski; Mikhail Abramov; Philipp Holliger; Vitor B Pinheiro; Piet Herdewijn; Marc Delarue
Journal:  Biomolecules       Date:  2020-12-08

7.  Engineered viral DNA polymerase with enhanced DNA amplification capacity: a proof-of-concept of isothermal amplification of damaged DNA.

Authors:  Carlos D Ordóñez; Ana Lechuga; Margarita Salas; Modesto Redrejo-Rodríguez
Journal:  Sci Rep       Date:  2020-09-14       Impact factor: 4.379

Review 8.  Building better polymerases: Engineering the replication of expanded genetic alphabets.

Authors:  Zahra Ouaray; Steven A Benner; Millie M Georgiadis; Nigel G J Richards
Journal:  J Biol Chem       Date:  2020-10-01       Impact factor: 5.157

9.  Characteristics of DNA polymerase I from an extreme thermophile, Thermus scotoductus strain K1.

Authors:  Ani Saghatelyan; Hovik Panosyan; Armen Trchounian; Nils-Kåre Birkeland
Journal:  Microbiologyopen       Date:  2021-01-07       Impact factor: 3.904

10.  Exploring Codon Adjustment Strategies towards Escherichia coli-Based Production of Viral Proteins Encoded by HTH1, a Novel Prophage of the Marine Bacterium Hypnocyclicus thermotrophus.

Authors:  Hasan Arsın; Andrius Jasilionis; Håkon Dahle; Ruth-Anne Sandaa; Runar Stokke; Eva Nordberg Karlsson; Ida Helene Steen
Journal:  Viruses       Date:  2021-06-23       Impact factor: 5.048

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