Literature DB >> 28615362

Drugging the catalytically inactive state of RET kinase in RET-rearranged tumors.

Dennis Plenker1,2, Maximilian Riedel1,2, Johannes Brägelmann1,2, Marcel A Dammert1,2, Rakhee Chauhan3, Phillip P Knowles3, Carina Lorenz1,2, Marina Keul4, Mike Bührmann4, Oliver Pagel5, Verena Tischler2, Andreas H Scheel6, Daniel Schütte2, Yanrui Song7, Justina Stark4, Florian Mrugalla4, Yannic Alber4, André Richters4, Julian Engel4, Frauke Leenders8, Johannes M Heuckmann8, Jürgen Wolf9, Joachim Diebold10, Georg Pall11, Martin Peifer2, Maarten Aerts12,13, Kris Gevaert12,13, René P Zahedi5, Reinhard Buettner6, Kevan M Shokat14, Neil Q McDonald3,15, Stefan M Kast4, Oliver Gautschi10, Roman K Thomas2,9,16, Martin L Sos17,2.   

Abstract

Oncogenic fusion events have been identified in a broad range of tumors. Among them, RET rearrangements represent distinct and potentially druggable targets that are recurrently found in lung adenocarcinomas. We provide further evidence that current anti-RET drugs may not be potent enough to induce durable responses in such tumors. We report that potent inhibitors, such as AD80 or ponatinib, that stably bind in the DFG-out conformation of RET may overcome these limitations and selectively kill RET-rearranged tumors. Using chemical genomics in conjunction with phosphoproteomic analyses in RET-rearranged cells, we identify the CCDC6-RETI788N mutation and drug-induced mitogen-activated protein kinase pathway reactivation as possible mechanisms by which tumors may escape the activity of RET inhibitors. Our data provide mechanistic insight into the druggability of RET kinase fusions that may be of help for the development of effective therapies targeting such tumors.
Copyright © 2017 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works.

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Year:  2017        PMID: 28615362      PMCID: PMC5805089          DOI: 10.1126/scitranslmed.aah6144

Source DB:  PubMed          Journal:  Sci Transl Med        ISSN: 1946-6234            Impact factor:   17.956


  54 in total

1.  Comprehensive analysis of kinase inhibitor selectivity.

Authors:  Mindy I Davis; Jeremy P Hunt; Sanna Herrgard; Pietro Ciceri; Lisa M Wodicka; Gabriel Pallares; Michael Hocker; Daniel K Treiber; Patrick P Zarrinkar
Journal:  Nat Biotechnol       Date:  2011-10-30       Impact factor: 54.908

2.  Molecular Mechanisms of Resistance to First- and Second-Generation ALK Inhibitors in ALK-Rearranged Lung Cancer.

Authors:  Justin F Gainor; Leila Dardaei; Satoshi Yoda; Luc Friboulet; Ignaty Leshchiner; Ryohei Katayama; Ibiayi Dagogo-Jack; Shirish Gadgeel; Katherine Schultz; Manrose Singh; Emily Chin; Melissa Parks; Dana Lee; Richard H DiCecca; Elizabeth Lockerman; Tiffany Huynh; Jennifer Logan; Lauren L Ritterhouse; Long P Le; Ashok Muniappan; Subba Digumarthy; Colleen Channick; Colleen Keyes; Gad Getz; Dora Dias-Santagata; Rebecca S Heist; Jochen Lennerz; Lecia V Sequist; Cyril H Benes; A John Iafrate; Mari Mino-Kenudson; Jeffrey A Engelman; Alice T Shaw
Journal:  Cancer Discov       Date:  2016-07-18       Impact factor: 39.397

3.  Targeting Drug Resistance in EGFR with Covalent Inhibitors: A Structure-Based Design Approach.

Authors:  Julian Engel; André Richters; Matthäus Getlik; Stefano Tomassi; Marina Keul; Martin Termathe; Jonas Lategahn; Christian Becker; Svenja Mayer-Wrangowski; Christian Grütter; Niklas Uhlenbrock; Jasmin Krüll; Niklas Schaumann; Simone Eppmann; Patrick Kibies; Franziska Hoffgaard; Jochen Heil; Sascha Menninger; Sandra Ortiz-Cuaran; Johannes M Heuckmann; Verena Tinnefeld; René P Zahedi; Martin L Sos; Carsten Schultz-Fademrecht; Roman K Thomas; Stefan M Kast; Daniel Rauh
Journal:  J Med Chem       Date:  2015-08-31       Impact factor: 7.446

4.  Alectinib shows potent antitumor activity against RET-rearranged non-small cell lung cancer.

Authors:  Tatsushi Kodama; Toshiyuki Tsukaguchi; Yasuko Satoh; Miyuki Yoshida; Yoshiaki Watanabe; Osamu Kondoh; Hiroshi Sakamoto
Journal:  Mol Cancer Ther       Date:  2014-10-27       Impact factor: 6.261

5.  Fragment-Based Discovery of a Dual pan-RET/VEGFR2 Kinase Inhibitor Optimized for Single-Agent Polypharmacology.

Authors:  Brendan Frett; Francesca Carlomagno; Maria Luisa Moccia; Annalisa Brescia; Giorgia Federico; Valentina De Falco; Brittany Admire; Zhongzhu Chen; Wenqing Qi; Massimo Santoro; Hong-yu Li
Journal:  Angew Chem Int Ed Engl       Date:  2015-06-30       Impact factor: 15.336

6.  Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles.

Authors:  Aravind Subramanian; Pablo Tamayo; Vamsi K Mootha; Sayan Mukherjee; Benjamin L Ebert; Michael A Gillette; Amanda Paulovich; Scott L Pomeroy; Todd R Golub; Eric S Lander; Jill P Mesirov
Journal:  Proc Natl Acad Sci U S A       Date:  2005-09-30       Impact factor: 11.205

7.  Structure and chemical inhibition of the RET tyrosine kinase domain.

Authors:  Phillip P Knowles; Judith Murray-Rust; Svend Kjaer; Rizaldy P Scott; Sarah Hanrahan; Massimo Santoro; Carlos F Ibáñez; Neil Q McDonald
Journal:  J Biol Chem       Date:  2006-08-23       Impact factor: 5.157

8.  Improvements to the percolator algorithm for Peptide identification from shotgun proteomics data sets.

Authors:  Marina Spivak; Jason Weston; Léon Bottou; Lukas Käll; William Stafford Noble
Journal:  J Proteome Res       Date:  2009-07       Impact factor: 4.466

9.  GPS 2.0, a tool to predict kinase-specific phosphorylation sites in hierarchy.

Authors:  Yu Xue; Jian Ren; Xinjiao Gao; Changjiang Jin; Longping Wen; Xuebiao Yao
Journal:  Mol Cell Proteomics       Date:  2008-05-06       Impact factor: 5.911

10.  Targeted genomic rearrangements using CRISPR/Cas technology.

Authors:  Peter S Choi; Matthew Meyerson
Journal:  Nat Commun       Date:  2014-04-24       Impact factor: 14.919

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  22 in total

1.  Quantitative Proteome Data Analysis of Tandem Mass Tags Labeled Samples.

Authors:  Oliver Pagel; Laxmikanth Kollipara; Albert Sickmann
Journal:  Methods Mol Biol       Date:  2021

Review 2.  Targeting RET-driven cancers: lessons from evolving preclinical and clinical landscapes.

Authors:  Alexander Drilon; Zishuo I Hu; Gillianne G Y Lai; Daniel S W Tan
Journal:  Nat Rev Clin Oncol       Date:  2017-11-14       Impact factor: 66.675

3.  Discovery and Optimization of wt-RET/KDR-Selective Inhibitors of RETV804M Kinase.

Authors:  Rebecca Newton; Bohdan Waszkowycz; Chitra Seewooruthun; Daniel Burschowsky; Mark Richards; Samantha Hitchin; Habiba Begum; Amanda Watson; Eleanor French; Niall Hamilton; Stuart Jones; Li-Ying Lin; Ian Waddell; Aude Echalier; Richard Bayliss; Allan M Jordan; Donald Ogilvie
Journal:  ACS Med Chem Lett       Date:  2020-02-28       Impact factor: 4.345

4.  Phenotype-Based Screens with Conformation-Specific Inhibitors Reveal p38 Gamma and Delta as Targets for HCC Polypharmacology.

Authors:  Jia Xin Yu; Amanda J Craig; Mary E Duffy; Carlos Villacorta-Martin; Verónica Miguela; Marina Ruiz de Galarreta; Alexander P Scopton; Lisa Silber; Andres Y Maldonado; Alexander Rialdi; Ernesto Guccione; Amaia Lujambio; Augusto Villanueva; Arvin C Dar
Journal:  Mol Cancer Ther       Date:  2019-06-18       Impact factor: 6.261

Review 5.  RET kinase inhibitors for RET-altered thyroid cancers.

Authors:  Danica M Vodopivec; Mimi I Hu
Journal:  Ther Adv Med Oncol       Date:  2022-06-21       Impact factor: 5.485

6.  Targeting RET Kinase in Neuroendocrine Prostate Cancer.

Authors:  Halena R VanDeusen; Johnny R Ramroop; Katherine L Morel; Song Yi Bae; Anjali V Sheahan; Zoi Sychev; Nathan A Lau; Larry C Cheng; Victor M Tan; Zhen Li; Ashley Petersen; John K Lee; Jung Wook Park; Rendong Yang; Justin H Hwang; Ilsa Coleman; Owen N Witte; Colm Morrissey; Eva Corey; Peter S Nelson; Leigh Ellis; Justin M Drake
Journal:  Mol Cancer Res       Date:  2020-05-27       Impact factor: 5.852

Review 7.  Advances in Targeting RET-Dependent Cancers.

Authors:  Vivek Subbiah; Gilbert J Cote
Journal:  Cancer Discov       Date:  2020-02-24       Impact factor: 39.397

Review 8.  State-of-the-Art Strategies for Targeting RET-Dependent Cancers.

Authors:  Vivek Subbiah; Dong Yang; Vamsidhar Velcheti; Alexander Drilon; Funda Meric-Bernstam
Journal:  J Clin Oncol       Date:  2020-02-21       Impact factor: 44.544

Review 9.  Non-mammalian models of multiple endocrine neoplasia type 2.

Authors:  Tirtha K Das; Ross L Cagan
Journal:  Endocr Relat Cancer       Date:  2018-02       Impact factor: 5.678

Review 10.  Therapeutic Advances in the Management of Patients with Advanced RET Fusion-Positive Non-Small Cell Lung Cancer.

Authors:  Fangdi Sun; Caroline E McCoach
Journal:  Curr Treat Options Oncol       Date:  2021-06-24
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