| Literature DB >> 28613249 |
Annika Dötsch1, Lewin Eisele2, Miriam Rabeling3, Katharina Rump4,5, Kai Walstein6, Alexandra Bick7, Linda Cox8, Andrea Engler9, Hagen S Bachmann10, Karl-Heinz Jöckel11, Michael Adamzik12,13, Jürgen Peters14, Simon T Schäfer15,16.
Abstract
Hypoxia-inducible-factor-2α (HIF-2α) and HIF-2 degrading prolyl-hydroxylases (PHD) are key regulators of adaptive hypoxic responses i.e., in acute respiratory distress syndrome (ARDS). Specifically, functionally active genetic variants of HIF-2α (single nucleotide polymorphism (SNP) [ch2:46441523(hg18)]) and PHD2 (C/T; SNP rs516651 and T/C; SNP rs480902) are associated with improved adaptation to hypoxia i.e., in high-altitude residents. However, little is known about these SNPs' prevalence in Caucasians and impact on ARDS-outcome. Thus, we tested the hypotheses that in Caucasian ARDS patients SNPs in HIF-2α or PHD2 genes are (1) common, and (2) independent risk factors for 30-day mortality. After ethics-committee approval, 272 ARDS patients were prospectively included, genotyped for PHD2 (Taqman SNP Genotyping Assay) and HIF-2α-polymorphism (restriction digest + agarose-gel visualization), and genotype dependent 30-day mortality was analyzed using Kaplan-Meier-plots and multivariate Cox-regression analyses. Frequencies were 99.62% for homozygous HIF-2α CC-carriers (CG: 0.38%; GG: 0%), 2.3% for homozygous PHD2 SNP rs516651 TT-carriers (CT: 18.9%; CC: 78.8%), and 3.7% for homozygous PHD2 SNP rs480902 TT-carriers (CT: 43.9%; CC: 52.4%). PHD2 rs516651 TT-genotype in ARDS was independently associated with a 3.34 times greater mortality risk (OR 3.34, CI 1.09-10.22; p = 0.034) within 30-days, whereas the other SNPs had no significant impact (p = ns). The homozygous HIF-2α GG-genotype was not present in our Caucasian ARDS cohort; however PHD2 SNPs exist in Caucasians, and PHD2 rs516651 TT-genotype was associated with an increased 30-day mortality suggesting a relevance for adaptive responses in ARDS.Entities:
Keywords: acute respiratory distress syndrome; genetic variants; hypoxia inducible factors; polymorphism; prolylhydroxylases
Mesh:
Substances:
Year: 2017 PMID: 28613249 PMCID: PMC5486088 DOI: 10.3390/ijms18061266
Source DB: PubMed Journal: Int J Mol Sci ISSN: 1422-0067 Impact factor: 5.923
Clinical characteristics of acute respiratory distress syndrome (ARDS) patients with genetic variants in the PHD2 gene (SNP rs516651, rs480902) and HIF-2α.
| Genotype | rs516651 | rs516651 | rs516651 | rs480902 | rs480902 | rs480902 | HIF-2α | HIF-2α | |||
|---|---|---|---|---|---|---|---|---|---|---|---|
| CC | CT | TT | CC | CT | TT | CC | CG | ||||
| Gender | 89/119 | 18/32 | 0/6 | 0.084 ** | 54/88 | 48/71 | 8/2 | 0.033 ** | 107 /157 | 1/0 | 0.410 |
| Age | 44 | 45 | 65.5 | 0.011 * | 45 | 43 | 43 | 0.290 * | 44 | 23 | 0.178 |
| Height | 175 | 178 | 178 | 0.160 * | 175 | 175 | 170 | 0.190 * | 175 | 192 | 0.098 |
| Body weight | 85 | 80 | 80 | 0.644 * | 85 | 85 | 78 | 0.322 * | 85 | 86 | 0.782 |
| Body mass index | 26.7 | 26.3 | 24.2 | 0.389 * | 26.1 | 27.3 | 26.4 | 0.436 * | 26.3 | 23.3 | 0.322 |
| Mean arterial blood pressure | 80 | 83 | 86 | 0.472 * | 80 | 81 | 95 | 0.046 * | 110 | - | - |
| Mean systolic arterial blood pressure | 120 | 120 | 136 | 0.126 * | 120 | 120 | 121 | 0.330 * | 80 | - | - |
| Heart rate | 107 | 113 | 106 | 0.648 * | 110 | 110 | 100 | 0.569 * | 120 | 110 | 0.334 |
| Mean pulmonary arterial pressure | 35.5 | 33 | 38.5 | 0.261 * | 35 | 35 | 38 | 0.416 * | 35.5 | 29 | 0.321 |
| Lower airway pressure | 18 | 18 | 16 | 0.468 * | 18 | 18 | 15 | 0.359 * | 18 | 22 | 0.126 |
| Horovitz ratio | 108 | 95 | 146 | 0.614 * | 110 | 106 | 96 | 0.517 * | 107 | 115 | 0.642 |
| Creatinin serum concentration | 1.42 | 1.27 | 1.34 | 0.413 * | 1.48 | 1.33 | 1.00 | 0.274 * | 1.4 | 1.11 | 0.225 |
| Dialysis (yes/no; %) | 115/76 | 21/24 | 5/1 | 0.114 ** | 81/46 | 61/51 | 5/5 | 0.288 ** | 145/98 | 0/1 | 0.759 |
| Infectious variables | |||||||||||
| White blood cell count | 14.2 | 13.4 | 9.8 | 0.517 * | 14.5 | 13.4 | 12.8 | 0.785 * | 13.8 | 16.4 | 0.357 |
| Procalcitonin serum concentration | 4.48 | 2.56 | 0.71 | 0.801 * | 2.21 | 5.38 | 5.34 | 0.139 * | 3.78 | - | - |
| C-reactive protein concentration | 19.9 | 17.4 | 18.4 | 0.435 * | 18.4 | 20.7 | 19.0 | 0.286 * | 19.6 | 28.2 | 0.967 |
| Disease severity | |||||||||||
| SAPS II ## (mean ± SD) + | 42.5 | 39.5 | 41.5 | 0.836 * | 43 | 42 | 27 | 0.099 * | 43 | 42 | 0.482 |
| SOFA ++ (mean ± SD) + | 14 | 13 | 13.5 | 0.368 * | 15 | 13 | 14 | 0.095 * | 14 | 12 | 0.433 |
| Hospital stay | 22 | 22 | 18 | 0.742 * | 24 | 21 | 18 | 0.596 * | 22 | 14 | 0.548 |
| 30-day mortality (%) | 48 (23) | 16 (32) | 5 (83.3) | 0.002 ** | 39 (27.5) | 32 (26.9) | 0 (0) | 0.158 ** | 70 (26.5) | 0 (0) | - |
Biometric data, infectious variables and disease severity of 264 ARDS patients. Data were documented at the time of first diagnosing ARDS. * Numbers (n); p Value based on Kruskal-Wallis-Test; + mean ± standard deviation; # median with 25% and 75% quartiles (median; Q1; Q3); ** Numbers; p Value based on Pearson-Chi-quadrat tests; ## Simplified Acute Physiology Score II; ++ Sequential Organ Failure Assessment score.
Figure 1Kaplan–Meier plot of 30-day mortality of acute respiratory distress syndrome (ARDS) patients stratified for PHD2 (rs516651) genotypes. Kaplan-Meier estimators for the three subgroups for 264 patients. CC = homozygous CC-genotype (n = 208); CT = heterozygous CT-genotype (n = 50); TT = homozygous TT-genotype (n = 6). For 8 patients, genotyping results were unclear and patients were excluded from analysis; log-rank-test: p = 0.001.
Cox-regression analyses of 264 ARDS patients with genetic variants in the Prolylhydroxylase 2 gene (rs516651).
| Covariables | HR (95% CI) | |
|---|---|---|
| rs516651, CT vs. CC | 1.71 (0.89–3.29) | 0.11 |
| rs516651, TT vs. CC | 3.34 (1.09–10.22) | 0.034 |
| Age, per year | 1.01 (0.99–1.036) | 0.40 |
| Gender, male vs. female | 0.92 (0.49–1.74) | 0.80 |
| Dialysis, yes vs. no | 0.94 (0.44–2.01) | 0.87 |
| SAPS II, per point | 1.03 (1.01–1.04) | 0.0032 |
| SOFA | 1.01 (0.98–1.04) | 0.43 |
| PCT | 1.002 (1.00–1.003) | 0.038 |
Number of patients with missing data for the different covariables were: Dialysis (n = 22), Simplified Acute Physiology Score II (SAPS II) (n = 12), Sequential Organ Failure Assessment score (SOFA) (n = 12), procalcitonin (PCT) (n = 67). The Table displays hazard ratio (HR) point estimates, 95% confidence intervals (95% CI), and p Values derived from Cox–regression- analyses.