Literature DB >> 28612136

Identification of two novel chicken GPR133 variants and their expression in different tissues.

Kai Tian1, Qihai Xiao1, Xueyou Zhang1, Xi Lan1, Xiaoling Zhao1, Yan Wang1, Diyan Li1, Huadong Yin1, Lin Ye1, Qing Zhu2.   

Abstract

GPR133 (G protein-coupled receptor 133) plays significant roles in various physiological processes. Alternatively splicing (AS) variants of GPR133 in many species have been predicted in multiple databases, but there is no available information about the AS events of chicken GPR133 (cGPR133). In the present study, two chicken GPR133 variants, cGPR133-va and cGPR133-vb, were identified by a combination of reverse transcription PCR (RT-PCR) and rapid amplification of cDNA 5'-ends (5' RACE). Sequence analysis shows that cGPR133-va and cGPR133-vb are resulting from different AS modules and their sequences are predicted to encode two distinct putative proteins, respectively. Quantitative real-time PCR (qRT-PCR) analysis revealed that cGPR133-va and cGPR133-vb are widely expressed in different tissues, while exhibiting specific expression profile. Altogether, our results first demonstrate the existence of novel cGPR133 variants and illustrate its transcriptional diversity and their widespread distribution, which provides a foundation for the further research of GPR133.

Entities:  

Keywords:  Alternative splicing; Chicken; Expression profile; GPR133

Mesh:

Substances:

Year:  2017        PMID: 28612136     DOI: 10.1007/s10142-017-0564-x

Source DB:  PubMed          Journal:  Funct Integr Genomics        ISSN: 1438-793X            Impact factor:   3.410


  69 in total

1.  A genomic view of alternative splicing.

Authors:  Barmak Modrek; Christopher Lee
Journal:  Nat Genet       Date:  2002-01       Impact factor: 38.330

2.  Alternative splicing of the auxin biosynthesis gene YUCCA4 determines its subcellular compartmentation.

Authors:  Verena Kriechbaumer; Pengwei Wang; Chris Hawes; Ben M Abell
Journal:  Plant J       Date:  2012-01-10       Impact factor: 6.417

3.  Gene-based copy number variation study reveals a microdeletion at 12q24 that influences height in the Korean population.

Authors:  Yun Kyoung Kim; Sanghoon Moon; Mi Yeong Hwang; Dong-Joon Kim; Ji Hee Oh; Young Jin Kim; Bok-Ghee Han; Jong-Young Lee; Bong-Jo Kim
Journal:  Genomics       Date:  2012-11-10       Impact factor: 5.736

Review 4.  Function of alternative splicing.

Authors:  Olga Kelemen; Paolo Convertini; Zhaiyi Zhang; Yuan Wen; Manli Shen; Marina Falaleeva; Stefan Stamm
Journal:  Gene       Date:  2012-08-15       Impact factor: 3.688

5.  Five novel variants of GPR103 and their expression in different tissues of goose (Anser cygnoides).

Authors:  Qihai Xiao; Dandan Liu; Liang Li; Jiwen Wang; Kailiang Huang; Hehe Liu; Chunchun Han; Zhixiong Pan; Xia Dong; Kai Lu; Le Li; Rongping Zhang
Journal:  Comp Biochem Physiol B Biochem Mol Biol       Date:  2014-03-20       Impact factor: 2.231

6.  A tethered agonist within the ectodomain activates the adhesion G protein-coupled receptors GPR126 and GPR133.

Authors:  Ines Liebscher; Julia Schön; Sarah C Petersen; Liane Fischer; Nina Auerbach; Lilian Marie Demberg; Amit Mogha; Maxi Cöster; Kay-Uwe Simon; Sven Rothemund; Kelly R Monk; Torsten Schöneberg
Journal:  Cell Rep       Date:  2014-12-18       Impact factor: 9.423

7.  Thermoplasticity in the plant circadian clock: how plants tell the time-perature.

Authors:  Allan B James; Naeem Hasan Syed; John W S Brown; Hugh G Nimmo
Journal:  Plant Signal Behav       Date:  2012-08-20

8.  Rbfox proteins regulate tissue-specific alternative splicing of Mef2D required for muscle differentiation.

Authors:  Valeria Runfola; Soji Sebastian; F Jeffrey Dilworth; Davide Gabellini
Journal:  J Cell Sci       Date:  2015-01-20       Impact factor: 5.285

9.  The origin of GPCRs: identification of mammalian like Rhodopsin, Adhesion, Glutamate and Frizzled GPCRs in fungi.

Authors:  Arunkumar Krishnan; Markus Sällman Almén; Robert Fredriksson; Helgi B Schiöth
Journal:  PLoS One       Date:  2012-01-04       Impact factor: 3.240

Review 10.  Abiotic stress miRNomes in the Triticeae.

Authors:  Burcu Alptekin; Peter Langridge; Hikmet Budak
Journal:  Funct Integr Genomics       Date:  2016-09-24       Impact factor: 3.410

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.