| Literature DB >> 28607573 |
Wen-Xiao Zhao1, Ning Cui2, Hai-Qiang Jiang3, Xu-Ming Ji2, Xiao-Chun Han2, Bing-Bing Han2, Tong Wang1, Shi-Jun Wang2.
Abstract
Radix Astragali (RA) with slight sweet and warm property is a significant "qi tonifying" herb; it is indicated for the syndrome of dampness stagnancy due to spleen deficiency (DSSD). The purpose of this research was to explore effects of RA and its split components on gene expression profiles related to water metabolism in rats with the DSSD syndrome for identifying components representing property and flavor of RA. The results indicated that RA and its split components, especially polysaccharides component, significantly increased the body weight and the urine volume and decreased the water load index of model rats. Our data also indicated differentially expressed genes (DEGs) related to water metabolism involved secretion, ion transport, water homeostasis, regulation of body fluid levels, and water channel activity; the expression of AQP1, AQP3, AQP4, AQP5, AQP6, and AQP8 was improved; calcium, cAMP, MAPK, PPAR, AMPK, and PI3K-Akt signaling pathway may be related to water metabolism. In general, results indicate that RA and its split components could promote water metabolism in rats with the DSSD syndrome via regulating the expression of AQPs, which reflected sweet-warm properties of RA. Effects of the polysaccharides component are better than others.Entities:
Year: 2017 PMID: 28607573 PMCID: PMC5457750 DOI: 10.1155/2017/4946031
Source DB: PubMed Journal: Evid Based Complement Alternat Med ISSN: 1741-427X Impact factor: 2.629
The primers of selected genes for qRT-PCR.
| GenBank accession number | Gene symbol | Forward primer (5′-3′) | Reverse primer (5′-3′) |
|---|---|---|---|
| NM_012779 | AQP5 | CACACCAGAAAGGGACGACA | TCCGTGAGCCATCTATCCCT |
| NM_053844 | Tff2 | GATCTTCGAAGTGCCCTGGT | ACCCCAGAGATCGACACAGT |
| NM_017008 | GAPDH | CAGGGCTGCCTTCTCTTGTG | TGGTGATGGGTTTCCCGTTG |
Figure 1Verification of overlap among RA split components. (a) Fingerprint with flavonoids as control sample. (b) Scatter plot of principal components analysis using HPLC-DAD data. S1, 1: polysaccharides component; S2, 2: flavonoids component; S3, 3: saponins component; and S4, 4: residual aqueous solution.
Figure 2Effects of RA and its split components on the body weight, the water load index, and the urine volume of rats (a–c). G1: normal control group, G2: model group, G3: RA decoction group, G4: flavonoids group, G5: saponins group, G6: polysaccharides group, and G7: residual aqueous solution group. P < 0.05 and P < 0.01, compared with the normal control group; #P < 0.05 and ##P < 0.01, compared with the model group; n = 8 in each group. Groups in this figure are the same as those in Table 2, Table 3, Table 4, and Figure 3.
Functional enrichment analysis of DEGs related to water metabolism.
| Group | Term | Description | Count |
|
|---|---|---|---|---|
| G2 versus G1 | GO:0046903 | Secretion | 55 | 5.54 |
| GO:0006811 | Ion transport | 65 | 1.62 | |
| GO:0019725 | Cellular homeostasis | 41 | 7.85 | |
| GO:0050878 | Regulation of body fluid levels | 20 | 1.92 | |
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| ||||
| G3 versus G2 | GO:0046903 | Secretion | 40 | 5.93 |
| GO:0019725 | Cellular homeostasis | 29 | 2.62 | |
| GO:0006811 | Ion transport | 38 | 1.92 | |
| GO:0050878 | Regulation of body fluid levels | 13 | 3.64 | |
|
| ||||
| G4 versus G2 | GO:0046903 | Secretion | 72 | 1.83 |
| GO:0006811 | Ion transport | 85 | 5.64 | |
| GO:0051046 | Regulation of secretion | 54 | 8.29 | |
| GO:0048878 | Chemical homeostasis | 66 | 1.35 | |
| GO:0050878 | Regulation of body fluid levels | 30 | 2.36 | |
| GO:0030104 | Water homeostasis | 8 | 2.94 | |
| GO:0042044 | Fluid transport | 5 | 1.47 | |
| GO:0015250 | Water channel activity | 4 | 1.02 | |
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| G5 versus G2 | GO:0006811 | Ion transport | 82 | 2.64 |
| GO:0009992 | Cellular water homeostasis | 4 | 1.03 | |
| GO:0042044 | Fluid transport | 5 | 1.75 | |
| GO:0006833 | Water transport | 4 | 3.40 | |
| GO:0015250 | Water channel activity | 4 | 1.27 | |
|
| ||||
| G6 versus G2 | GO:0006811 | Ion transport | 208 | 1.53 |
| GO:0046903 | Secretion | 154 | 3.76 | |
| GO:0050878 | Regulation of body fluid levels | 59 | 1.33 | |
| GO:0019725 | Cellular homeostasis | 117 | 2.65 | |
| GO:0006884 | Cell volume homeostasis | 8 | 1.61 | |
| GO:0007589 | Body fluid secretion | 19 | 3.35 | |
| GO:0005216 | Ion channel activity | 48 | 3.78 | |
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| G7 versus G2 | GO:0006811 | Ion transport | 183 | 5.84 |
| GO:0046903 | Secretion | 139 | 1.00 | |
| GO:0050878 | Regulation of body fluid levels | 56 | 1.51 | |
| GO:0019725 | Cellular homeostasis | 104 | 8.78 | |
| GO:0030104 | Water homeostasis | 13 | 1.09 | |
| GO:0015267 | Channel activity | 50 | 3.24 | |
| GO:0050891 | Multicellular organismal water homeostasis | 9 | 1.92 | |
Expression of AQPs in each group.
| GenBank accession number | Gene symbol | FC | FC | FC | FC | FC | FC |
|---|---|---|---|---|---|---|---|
| NM_012778 | AQP1 | — | — | 2.08 | — | 4.90 | 4.53 |
| NM_031703 | AQP3 | — | — | — | −2.95 | — | — |
| NM_001142366 | AQP4 | — | — | — | 3.01 | — | — |
| NM_012779 | AQP5 | −5.41 | 21.06 | 144.07 | — | 504.90 | 429.01 |
| NM_022181 | AQP6 | — | — | 2.03 | — | — | — |
| NM_019158 | AQP8 | — | −2.19 | — | −6.14 | −2.07 | −6.30 |
Note: FC: fold change; —: no changes of gene expression.
KEGG pathway enrichment analysis of DEGs.
| Group | Term | Description | Count |
| Genes |
|---|---|---|---|---|---|
| G2 versus G1 | KEGG:rno04080 | Neuroactive ligand-receptor interaction | 20 | 2.10 | GPR83, CCKAR, TAAR7B, CCKBR, OPRL1, LEPR, OXTR, GRM1, CRHR2, ADRB1, NMUR1, GALR3, HTR6, GRM6, UTS2R, TAAR5, LHB, GLP1R, MTNR1A, HTR5B |
| KEGG:rno04020 | Calcium signaling pathway | 12 | 3.16 | CCKAR, SLC8A2, ADRB1, CCKBR, CALML3, HTR6, SPHK1, CACNA1G, OXTR, CAMK2A, GRM1, HTR5B | |
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| G3 versus G2 | KEGG:rno04060 | Cytokine-cytokine receptor interaction | 11 | 1.14 | VEGFB, IL1R2, CCL20, CXCL13, TNFRSF12A, IL18, CCR2, IL13, CSF3R, IL6R, TNFSF9 |
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| G4 versus G2 | KEGG:rno04024 | cAMP signaling pathway | 17 | 8.27 | ADCY3, VAV3, ADCY2, GRIN1, ATP1A3, CREB5, VAV2, ATP2B2, FOS, ATP2B3, SSTR2, CREB3L4, RAPGEF3, ADCY10, LIPE, GLP1R, AKT2 |
| KEGG:rno04020 | Calcium signaling pathway | 16 | 1.35 | ADCY3, CCKAR, GNA15, ADCY2, TACR3, CCKBR, GRIN1, SPHK1, BDKRB1, NTSR1, ATP2B2, ATP2B3, PLCD4, CACNA1E, HTR2B, CACNA1A | |
| KEGG:rno04152 | AMPK signaling pathway | 11 | 1.01 | SLC2A4, LEPR, SCD, PFKFB1, CREB3L4, CREB5, ADIPOQ, IRS1, LIPE, AKT2, PCK1 | |
| KEGG:rno04080 | Neuroactive ligand-receptor interaction | 17 | 3.62 | CCKAR, TAAR7B, TACR3, CCKBR, GRIK2, LEPR, GRIN1, PRSS1, BDKRB1, NTSR1, SSTR2, GALR1, LOC286960, PRSS3, HTR2B, GLP1R, GABRP | |
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| G5 versus G2 | KEGG:rno03320 | PPAR signaling pathway | 10 | 3.80 | CPT1B, APOA2, ACADM, PPARG, AQP7, GK, FABP2, ADIPOQ, SLC27A2, ACSL6 |
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| G6 versus G2 | KEGG:rno04010 | MAPK signaling pathway | 40 | 6.60 | IL1R2, IL1R1, FGF7, FGFR3, TNF, PDGFB, MAP4K2, CACNB1, FGF13, HSPA1B, CACNB4, TGFB2, KRAS, RAC2, SOS2, FAS, IL1A, HSPA8, AKT2, PRKCA, PTPN5, TAOK3, PTPRR, NR4A1, FGF20, MECOM, STK4, RPS6KA5, PLA2G4A, DUSP2, MAPK12, JUN, MAPK8, CACNA1E, MAPK8IP1, GADD45B, MAP3K14, GADD45A, DUSP8, CD14 |
| KEGG:rno04024 | cAMP signaling pathway | 28 | 1.29 | PPARA, ADCY4, ADCY8, CNGB1, GRIN3A, SOX9, GLI3, ATP2B1, ATP2B2, ATP2B3, RAC2, CREB3L1, CREB3L4, CAMK2B, RAPGEF3, ADCY10, AKT2, PLD1, VAV3, ROCK2, ADCY9, JUN, ABCC4, GNAS, MAPK8, GHSR, GLP1R, LIPE | |
| KEGG:rno04151 | PI3K-Akt signaling pathway | 41 | 3.65 | FGF7, PHLPP2, FGFR3, PDGFB, GNG13, KITLG, VTN, FGF13, BCL2L1, IGF1R, LAMB3, KRAS, COMP, ATF6B, TEK, SOS2, CREB3L1, GYS2, CREB3L4, THBS1, PPP2R2B, COL11A1, ANGPT2, AKT2, GHR, PRKCA, SGK1, SGK2, IL7, ITGA2, NR4A1, IL6R, FGF20, VEGFB, LAMA2, LAMA1, VEGFA, GNB5, LAMC2, LAMC1, INS1 | |
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| G7 versus G2 | KEGG:rno03320 | PPAR signaling pathway | 13 | 1.11 | LPL, CYP4A1, CYP4A3, SCD, ADIPOQ, RGD1565355, PCK1, APOA2, CD36, LOC681458, APOC3, CYP4A8, FABP5 |
| KEGG:rno04020 | Calcium signaling pathway | 23 | 1.95 | ORAI2, GNA15, CCKBR, ADCY8, TACR2, TACR1, SPHK1, BDKRB1, ATP2B2, P2RX7, CHRM5, PLCB3, ATP2B3, CAMK4, ADCY9, ATP2A3, P2RX2, TBXA2R, PLCD4, CHRNA7, HTR2B, PLCB2, CACNA1A | |
| KEGG:rno04152 | AMPK signaling pathway | 17 | 2.65 | LEPR, SCD, IRS1, ADIPOQ, RGD1565355, PCK1, IGF1R, G6PC, EIF4EBP1, CD36, LOC681458, CREB3L1, GYS2, CREB3L4, PIK3R3, PPP2R2B, LIPE | |
Figure 3Fold change (FC) obtained using qRT-PCR revealed parallel patterns of gene expression found with gene chip analysis. Fold expression change with a positive sign indicates upregulation of the gene, whereas downregulation is represented by a negative sign. FC based on the results obtained with qRT-PCR or gene chip analysis. FC: relative gene expression level. log2 FC is the vertical coordinate. All groups were compared with the model group.