Literature DB >> 28586332

Source code: Putting metagenomics to the test in the clinic.

Carrie Arnold.   

Abstract

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Year:  2017        PMID： 28586332     DOI： 10.1038/nm0617-645

Source DB:  PubMed          Journal:  Nat Med        ISSN： 1078-8956            Impact factor:   53.440


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  5 in total

1.  Unbiased Detection of Respiratory Viruses by Use of RNA Sequencing-Based Metagenomics: a Systematic Comparison to a Commercial PCR Panel.

Authors:  Erin H Graf; Keith E Simmon; Keith D Tardif; Weston Hymas; Steven Flygare; Karen Eilbeck; Mark Yandell; Robert Schlaberg
Journal:  J Clin Microbiol       Date:  2016-01-27       Impact factor: 5.948

2.  Actionable diagnosis of neuroleptospirosis by next-generation sequencing.

Authors:  Michael R Wilson; Samia N Naccache; Erik Samayoa; Mark Biagtan; Hiba Bashir; Guixia Yu; Shahriar M Salamat; Sneha Somasekar; Scot Federman; Steve Miller; Robert Sokolic; Elizabeth Garabedian; Fabio Candotti; Rebecca H Buckley; Kurt D Reed; Teresa L Meyer; Christine M Seroogy; Renee Galloway; Sheryl L Henderson; James E Gern; Joseph L DeRisi; Charles Y Chiu
Journal:  N Engl J Med       Date:  2014-06-04       Impact factor: 91.245

3.  A culture-independent sequence-based metagenomics approach to the investigation of an outbreak of Shiga-toxigenic Escherichia coli O104:H4.

Authors:  Nicholas J Loman; Chrystala Constantinidou; Martin Christner; Holger Rohde; Jacqueline Z-M Chan; Joshua Quick; Jacqueline C Weir; Christopher Quince; Geoffrey P Smith; Jason R Betley; Martin Aepfelbacher; Mark J Pallen
Journal:  JAMA       Date:  2013-04-10       Impact factor: 56.272

4.  Diagnosis of neuroinvasive astrovirus infection in an immunocompromised adult with encephalitis by unbiased next-generation sequencing.

Authors:  Samia N Naccache; Karl S Peggs; Frank M Mattes; Rahul Phadke; Jeremy A Garson; Paul Grant; Erik Samayoa; Scot Federman; Steve Miller; Michael P Lunn; Vanya Gant; Charles Y Chiu
Journal:  Clin Infect Dis       Date:  2015-01-07       Impact factor: 9.079

5.  Taxonomer: an interactive metagenomics analysis portal for universal pathogen detection and host mRNA expression profiling.

Authors:  Steven Flygare; Keith Simmon; Chase Miller; Yi Qiao; Brett Kennedy; Tonya Di Sera; Erin H Graf; Keith D Tardif; Aurélie Kapusta; Shawn Rynearson; Chris Stockmann; Krista Queen; Suxiang Tong; Karl V Voelkerding; Anne Blaschke; Carrie L Byington; Seema Jain; Andrew Pavia; Krow Ampofo; Karen Eilbeck; Gabor Marth; Mark Yandell; Robert Schlaberg
Journal:  Genome Biol       Date:  2016-05-26       Impact factor: 13.583
  5 in total
  2 in total

1.  FDA-ARGOS is a database with public quality-controlled reference genomes for diagnostic use and regulatory science.

Authors:  Heike Sichtig; Timothy Minogue; Yi Yan; Christopher Stefan; Adrienne Hall; Luke Tallon; Lisa Sadzewicz; Suvarna Nadendla; William Klimke; Eneida Hatcher; Martin Shumway; Dayanara Lebron Aldea; Jonathan Allen; Jeffrey Koehler; Tom Slezak; Stephen Lovell; Randal Schoepp; Uwe Scherf
Journal:  Nat Commun       Date:  2019-07-25       Impact factor: 14.919

2.  Antimicrobial De-Escalation in the ICU: From Recommendations to Level of Evidence.

Authors:  Ines Lakbar; Jan J De Waele; Alexis Tabah; Sharon Einav; Ignacio Martin-Loeches; Marc Leone
Journal:  Adv Ther       Date:  2020-05-27       Impact factor: 3.845
  2 in total

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