Literature DB >> 28580597

False fMRI activation after motion correction.

Renat Yakupov1, Juan Lei2,3,4, Michael B Hoffmann2,5, Oliver Speck1,5,6,7.   

Abstract

Motion correction of echo-planar imaging (EPI) data used in functional MRI (fMRI) is an essential preprocessing step performed prior to statistical analysis. At ultra-high resolution fMRI, current requirements regarding translational and rotational motion may no longer be acceptable. This prompts the need for a systematic investigation of the effects of motion correction procedures with in vivo fMRI data. Here we systematically evaluated the effect of retrospective motion correction with freely available fMRI analysis software packages (FSL, AFNI, and SPM) on activation maps using fMRI data acquired with prospective motion detection, to identify and quantify confounding effects of retrospective motion correction, and to evaluate its dependence on spatial resolution and motion correction algorithms. Brain activation maps were obtained for two different resolutions, an ultrahigh, that is, 0.653 mm3 , and a more widely used 2.03 mm3 isotropic resolutions at 7 T. The EPI data were acquired using simultaneous non-image-based optical moiré phase tracking (MPT) of physical motion. The results showed that image-based motion detection, performed by SPM8 software package, may be erroneous in high-field fMRI data with partial brain coverage and can introduce spurious motion leading to false-positive and false-negative activation. Further analyses demonstrated that limited acquisition field of view has the dominant influence on the effect. Hum Brain Mapp 38:4497-4510, 2017.
© 2017 Wiley Periodicals, Inc. © 2017 Wiley Periodicals, Inc.

Entities:  

Keywords:  EPI; artifacts; fMRI; motion correction; prospective motion correction

Mesh:

Year:  2017        PMID: 28580597      PMCID: PMC5553448          DOI: 10.1002/hbm.23677

Source DB:  PubMed          Journal:  Hum Brain Mapp        ISSN: 1065-9471            Impact factor:   5.038


  31 in total

Review 1.  Sources of distortion in functional MRI data.

Authors:  P Jezzard; S Clare
Journal:  Hum Brain Mapp       Date:  1999       Impact factor: 5.038

2.  Modeling geometric deformations in EPI time series.

Authors:  J L Andersson; C Hutton; J Ashburner; R Turner; K Friston
Journal:  Neuroimage       Date:  2001-05       Impact factor: 6.556

3.  Motion correction algorithms may create spurious brain activations in the absence of subject motion.

Authors:  L Freire; J F Mangin
Journal:  Neuroimage       Date:  2001-09       Impact factor: 6.556

4.  Controlled aliasing in parallel imaging results in higher acceleration (CAIPIRINHA) for multi-slice imaging.

Authors:  Felix A Breuer; Martin Blaimer; Robin M Heidemann; Matthias F Mueller; Mark A Griswold; Peter M Jakob
Journal:  Magn Reson Med       Date:  2005-03       Impact factor: 4.668

5.  Comparison of physiological noise at 1.5 T, 3 T and 7 T and optimization of fMRI acquisition parameters.

Authors:  C Triantafyllou; R D Hoge; G Krueger; C J Wiggins; A Potthast; G C Wiggins; L L Wald
Journal:  Neuroimage       Date:  2005-05-15       Impact factor: 6.556

6.  Multiband multislice GE-EPI at 7 tesla, with 16-fold acceleration using partial parallel imaging with application to high spatial and temporal whole-brain fMRI.

Authors:  Steen Moeller; Essa Yacoub; Cheryl A Olman; Edward Auerbach; John Strupp; Noam Harel; Kâmil Uğurbil
Journal:  Magn Reson Med       Date:  2010-05       Impact factor: 4.668

7.  Human ocular dominance columns as revealed by high-field functional magnetic resonance imaging.

Authors:  K Cheng; R A Waggoner; K Tanaka
Journal:  Neuron       Date:  2001-10-25       Impact factor: 17.173

8.  Functional MRI of human brain activation at high spatial resolution.

Authors:  J Frahm; K D Merboldt; W Hänicke
Journal:  Magn Reson Med       Date:  1993-01       Impact factor: 4.668

9.  Layer-specific BOLD activation in human V1.

Authors:  Peter J Koopmans; Markus Barth; David G Norris
Journal:  Hum Brain Mapp       Date:  2010-09       Impact factor: 5.038

10.  Cortical depth dependent functional responses in humans at 7T: improved specificity with 3D GRASE.

Authors:  Federico De Martino; Jan Zimmermann; Lars Muckli; Kamil Ugurbil; Essa Yacoub; Rainer Goebel
Journal:  PLoS One       Date:  2013-03-22       Impact factor: 3.240

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  1 in total

1.  Active head motion reduction in magnetic resonance imaging using tactile feedback.

Authors:  Florian Krause; Caroline Benjamins; Judith Eck; Michael Lührs; Rick van Hoof; Rainer Goebel
Journal:  Hum Brain Mapp       Date:  2019-06-09       Impact factor: 5.038

  1 in total

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