Literature DB >> 28576089

Coarse-grained representation of the quasi adiabatic propagator path integral for the treatment of non-Markovian long-time bath memory.

Martin Richter1, Benjamin P Fingerhut1.   

Abstract

The description of non-Markovian effects imposed by low frequency bath modes poses a persistent challenge for path integral based approaches like the iterative quasi-adiabatic propagator path integral (iQUAPI) method. We present a novel approximate method, termed mask assisted coarse graining of influence coefficients (MACGIC)-iQUAPI, that offers appealing computational savings due to substantial reduction of considered path segments for propagation. The method relies on an efficient path segment merging procedure via an intermediate coarse grained representation of Feynman-Vernon influence coefficients that exploits physical properties of system decoherence. The MACGIC-iQUAPI method allows us to access the regime of biological significant long-time bath memory on the order of hundred propagation time steps while retaining convergence to iQUAPI results. Numerical performance is demonstrated for a set of benchmark problems that cover bath assisted long range electron transfer, the transition from coherent to incoherent dynamics in a prototypical molecular dimer and excitation energy transfer in a 24-state model of the Fenna-Matthews-Olson trimer complex where in all cases excellent agreement with numerically exact reference data is obtained.

Entities:  

Year:  2017        PMID: 28576089      PMCID: PMC5453798          DOI: 10.1063/1.4984075

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  41 in total

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Authors: 
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Journal:  J Chem Phys       Date:  2012-02-28       Impact factor: 3.488

3.  Path-integral Monte Carlo simulations for electronic dynamics on molecular chains. I. Sequential hopping and super exchange.

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Journal:  J Chem Phys       Date:  2004-12-22       Impact factor: 3.488

4.  The structural basis for the difference in absorbance spectra for the FMO antenna protein from various green sulfur bacteria.

Authors:  Dale E Tronrud; Jianzhong Wen; Leslie Gay; Robert E Blankenship
Journal:  Photosynth Res       Date:  2009-05-13       Impact factor: 3.573

5.  A hybrid stochastic hierarchy equations of motion approach to treat the low temperature dynamics of non-Markovian open quantum systems.

Authors:  Jeremy M Moix; Jianshu Cao
Journal:  J Chem Phys       Date:  2013-10-07       Impact factor: 3.488

6.  Nonperturbative expansion method for a quantum system coupled to a harmonic-oscillator bath.

Authors: 
Journal:  Phys Rev A       Date:  1990-06-15       Impact factor: 3.140

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Authors:  Jeffrey R Reimers; Malgorzata Biczysko; Douglas Bruce; David F Coker; Terry J Frankcombe; Hideki Hashimoto; Jürgen Hauer; Ryszard Jankowiak; Tobias Kramer; Juha Linnanto; Fikret Mamedov; Frank Müh; Margus Rätsep; Thomas Renger; Stenbjörn Styring; Jian Wan; Zhuan Wang; Zheng-Yu Wang-Otomo; Yu-Xiang Weng; Chunhong Yang; Jian-Ping Zhang; Arvi Freiberg; Elmars Krausz
Journal:  Biochim Biophys Acta       Date:  2016-06-29

8.  Quantum effects in ultrafast electron transfers within cryptochromes.

Authors:  Thiago Firmino; Etienne Mangaud; Fabien Cailliez; Adrien Devolder; David Mendive-Tapia; Fabien Gatti; Christoph Meier; Michèle Desouter-Lecomte; Aurélien de la Lande
Journal:  Phys Chem Chem Phys       Date:  2016-07-18       Impact factor: 3.676

9.  In situ mapping of the energy flow through the entire photosynthetic apparatus.

Authors:  Jakub Dostál; Jakub Pšenčík; Donatas Zigmantas
Journal:  Nat Chem       Date:  2016-05-30       Impact factor: 24.427

10.  Origin of long-lived coherences in light-harvesting complexes.

Authors:  Niklas Christensson; Harald F Kauffmann; Tõnu Pullerits; Tomáš Mančal
Journal:  J Phys Chem B       Date:  2012-06-14       Impact factor: 2.991

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  3 in total

Review 1.  Artificial Photosynthesis: Is Computation Ready for the Challenge Ahead?

Authors:  Silvio Osella
Journal:  Nanomaterials (Basel)       Date:  2021-01-24       Impact factor: 5.076

2.  Predicting the future of excitation energy transfer in light-harvesting complex with artificial intelligence-based quantum dynamics.

Authors:  Arif Ullah; Pavlo O Dral
Journal:  Nat Commun       Date:  2022-04-11       Impact factor: 17.694

3.  Simple Quantum Dynamics with Thermalization.

Authors:  Thomas L C Jansen
Journal:  J Phys Chem A       Date:  2017-12-20       Impact factor: 2.781

  3 in total

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