Literature DB >> 28572762

Evaluating and Improving Automatic Sleep Spindle Detection by Using Multi-Objective Evolutionary Algorithms.

Min-Yin Liu1, Adam Huang2, Norden E Huang1,2.   

Abstract

Sleep spindles are brief bursts of brain activity in the sigma frequency range (11-16 Hz) measured by electroencephalography (EEG) mostly during non-rapid eye movement (NREM) stage 2 sleep. These oscillations are of great biological and clinical interests because they potentially play an important role in identifying and characterizing the processes of various neurological disorders. Conventionally, sleep spindles are identified by expert sleep clinicians via visual inspection of EEG signals. The process is laborious and the results are inconsistent among different experts. To resolve the problem, numerous computerized methods have been developed to automate the process of sleep spindle identification. Still, the performance of these automated sleep spindle detection methods varies inconsistently from study to study. There are two reasons: (1) the lack of common benchmark databases, and (2) the lack of commonly accepted evaluation metrics. In this study, we focus on tackling the second problem by proposing to evaluate the performance of a spindle detector in a multi-objective optimization context and hypothesize that using the resultant Pareto fronts for deriving evaluation metrics will improve automatic sleep spindle detection. We use a popular multi-objective evolutionary algorithm (MOEA), the Strength Pareto Evolutionary Algorithm (SPEA2), to optimize six existing frequency-based sleep spindle detection algorithms. They include three Fourier, one continuous wavelet transform (CWT), and two Hilbert-Huang transform (HHT) based algorithms. We also explore three hybrid approaches. Trained and tested on open-access DREAMS and MASS databases, two new hybrid methods of combining Fourier with HHT algorithms show significant performance improvement with F1-scores of 0.726-0.737.

Entities:  

Keywords:  Hilbert-Huang transform; Pareto front; automatic detection; multi-objective evolutionary algorithm; performance assessment; sleep spindles

Year:  2017        PMID: 28572762      PMCID: PMC5435763          DOI: 10.3389/fnhum.2017.00261

Source DB:  PubMed          Journal:  Front Hum Neurosci        ISSN: 1662-5161            Impact factor:   3.169


  32 in total

1.  The effects of normal aging on sleep spindle and K-complex production.

Authors:  Kate Crowley; John Trinder; Young Kim; Melinda Carrington; Ian M Colrain
Journal:  Clin Neurophysiol       Date:  2002-10       Impact factor: 3.708

2.  Automated sleep-spindle detection in healthy children polysomnograms.

Authors:  Leonardo Causa; Claudio M Held; Javier Causa; Pablo A Estévez; Claudio A Perez; Rodrigo Chamorro; Marcelo Garrido; Cecilia Algarín; Patricio Peirano
Journal:  IEEE Trans Biomed Eng       Date:  2010-06-14       Impact factor: 4.538

3.  Prediction of general mental ability based on neural oscillation measures of sleep.

Authors:  Róbert Bódizs; Tamás Kis; Alpár Sándor Lázár; Linda Havrán; Péter Rigó; Zsófia Clemens; Péter Halász
Journal:  J Sleep Res       Date:  2005-09       Impact factor: 3.981

4.  Sleep spindles and learning potential.

Authors:  S M Fogel; R Nader; K A Cote; C T Smith
Journal:  Behav Neurosci       Date:  2007-02       Impact factor: 1.912

5.  Development and comparison of four sleep spindle detection methods.

Authors:  Eero Huupponen; Germán Gómez-Herrero; Antti Saastamoinen; Alpo Värri; Joel Hasan; Sari-Leena Himanen
Journal:  Artif Intell Med       Date:  2007-06-06       Impact factor: 5.326

6.  Validation of a novel automatic sleep spindle detector with high performance during sleep in middle aged subjects.

Authors:  Sabrina L Wendt; Julie A E Christensen; Jacob Kempfner; Helle L Leonthin; Poul Jennum; Helge B D Sorensen
Journal:  Conf Proc IEEE Eng Med Biol Soc       Date:  2012

7.  Sleep spindles in Parkinson's disease may predict the development of dementia.

Authors:  Véronique Latreille; Julie Carrier; Marjolaine Lafortune; Ronald B Postuma; Josie-Anne Bertrand; Michel Panisset; Sylvain Chouinard; Jean-François Gagnon
Journal:  Neurobiol Aging       Date:  2014-09-18       Impact factor: 4.673

8.  The association between sleep spindles and IQ in healthy school-age children.

Authors:  Reut Gruber; Merrill S Wise; Sonia Frenette; Bärbel Knäauper; Alice Boom; Laura Fontil; Julie Carrier
Journal:  Int J Psychophysiol       Date:  2013-04-06       Impact factor: 2.997

9.  Sleep-spindle detection: crowdsourcing and evaluating performance of experts, non-experts and automated methods.

Authors:  Simon C Warby; Sabrina L Wendt; Peter Welinder; Emil G S Munk; Oscar Carrillo; Helge B D Sorensen; Poul Jennum; Paul E Peppard; Pietro Perona; Emmanuel Mignot
Journal:  Nat Methods       Date:  2014-02-23       Impact factor: 28.547

10.  Automatic Sleep Spindle Detection and Genetic Influence Estimation Using Continuous Wavelet Transform.

Authors:  Marek Adamczyk; Lisa Genzel; Martin Dresler; Axel Steiger; Elisabeth Friess
Journal:  Front Hum Neurosci       Date:  2015-11-19       Impact factor: 3.169

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  1 in total

1.  Sleep Spindle Characteristics in Obstructive Sleep Apnea Syndrome (OSAS).

Authors:  Hiwa Mohammadi; Ardalan Aarabi; Mohammad Rezaei; Habibolah Khazaie; Serge Brand
Journal:  Front Neurol       Date:  2021-02-25       Impact factor: 4.003

  1 in total

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