Literature DB >> 28561079

Determinants of the host-guest interactions between α-, β- and γ-cyclodextrins and group IA, IIA and IIIA metal cations: a DFT/PCM study.

S E Angelova1, V K Nikolova, T M Dudev.   

Abstract

The most widely used native cyclodextrins are α-, β- and γ-cyclodextrins containing six, seven or eight α-d-glucopyranoside units in the ring, respectively. Although the ligation properties of these host molecules have been extensively studied, a number of questions regarding their metal binding and selectivity remain unaddressed: to what extent do the size and flexibility of the host α-, β- and γ-cyclodextrins influence their metal affinity/selectivity? Which metal is the most preferred binding partner of α-, β- and γ-cyclodextrins? How do the charge, size and preferred coordination number of the metal cation shape its interactions with the host cyclodextrin? Can the guest metal cation inflict structural alterations in the host molecule and, if so, how do these changes correlate with the metal's properties? In the present study, by employing density functional theory (DFT) calculations combined with polarizable continuum model (PCM) computations, we try to answer these questions by evaluating the thermodynamic parameters of the IA, IIA and IIIA group metal binding to α, β- and γ-cyclodextrins. We assess how the interaction between the two binding partners depends on (1) the size, valence state and preferred coordination number of the guest metal cations, (2) the size and flexibility of the host molecule, and (3) the dielectric properties of the environment. The series of group IA (Na+ and Rb+), IIA (Mg2+ and Sr2+) and IIIA (Al3+ and In3+) metal cations have been chosen for the task as they allow us to study the effect of various metal parameters (variable charge, ionic radius and coordination number) on the strength and form of the interactions with the host cyclodextrins.

Entities:  

Year:  2017        PMID: 28561079     DOI: 10.1039/c7cp01253e

Source DB:  PubMed          Journal:  Phys Chem Chem Phys        ISSN: 1463-9076            Impact factor:   3.676


  3 in total

1.  Complexation of biologically essential (mono- and divalent) metal cations to cucurbiturils: a DFT/SMD evaluation of the key factors governing the host-guest recognition.

Authors:  Nikoleta Kircheva; Stefan Dobrev; Lyubima Dasheva; Iskra Koleva; Valya Nikolova; Silvia Angelova; Todor Dudev
Journal:  RSC Adv       Date:  2020-07-27       Impact factor: 4.036

2.  Factors governing the competition between group IA and IB cations for monensin A: a DFT/PCM study.

Authors:  Todor Dudev; Diana Cheshmedzhieva; Radoslava Dimitrova; Peter Dorkov; Ivayla Pantcheva
Journal:  RSC Adv       Date:  2020-02-04       Impact factor: 3.361

3.  A DFT/PCM Study on the Affinity of Salinomycin to Bind Monovalent Metal Cations.

Authors:  Todor Dudev; Diana Cheshmedzhieva; Peter Dorkov; Ivayla Pantcheva
Journal:  Molecules       Date:  2022-01-14       Impact factor: 4.411

  3 in total

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