| Literature DB >> 28555147 |
Tuyet T A Truong1,2, Giles E St J Hardy1, Margaret E Andrew1.
Abstract
Invasive weeds are a serious problem worldwide, threatening biodiversity and damaging economies. Modeling potential distributions of invasive weeds can prioritize locations for monitoring and control efforts, increasing management efficiency. Forecasts of invasion risk at regional to continental scales are enabled by readily available downscaled climate surfaces together with an increasing number of digitized and georeferenced species occurrence records and species distribution modeling techniques. However, predictions at a finer scale and in landscapes with less topographic variation may require predictors that capture biotic processes and local abiotic conditions. Contemporary remote sensing (RS) data can enhance predictions by providing a range of spatial environmental data products at fine scale beyond climatic variables only. In this study, we used the Global Biodiversity Information Facility (GBIF) and empirical maximum entropy (MaxEnt) models to model the potential distributions of 14 invasive plant species across Southeast Asia (SEA), selected from regional and Vietnam's lists of priority weeds. Spatial environmental variables used to map invasion risk included bioclimatic layers and recent representations of global land cover, vegetation productivity (GPP), and soil properties developed from Earth observation data. Results showed that combining climate and RS data reduced predicted areas of suitable habitat compared with models using climate or RS data only, with no loss in model accuracy. However, contributions of RS variables were relatively limited, in part due to uncertainties in the land cover data. We strongly encourage greater adoption of quantitative remotely sensed estimates of ecosystem structure and function for habitat suitability modeling. Through comprehensive maps of overall predicted area and diversity of invasive species, we found that among lifeforms (herb, shrub, and vine), shrub species have higher potential invasion risk in SEA. Native invasive species, which are often overlooked in weed risk assessment, may be as serious a problem as non-native invasive species. Awareness of invasive weeds and their environmental impacts is still nascent in SEA and information is scarce. Freely available global spatial datasets, not least those provided by Earth observation programs, and the results of studies such as this one provide critical information that enables strategic management of environmental threats such as invasive species.Entities:
Keywords: MODIS; MaxEnt; Southeast Asia; invasibility; native invasive species; non-native invasive species; species distribution modeling
Year: 2017 PMID: 28555147 PMCID: PMC5430062 DOI: 10.3389/fpls.2017.00770
Source DB: PubMed Journal: Front Plant Sci ISSN: 1664-462X Impact factor: 5.753
Applications of remote sensing data as environmental variables in plant distribution models.
| Predictor variables | RS data source | Reference |
|---|---|---|
| Topographic data/elevation | ASTER, Quickbird-2 and WorldView-2, LiDAR, SRTM | |
| Climate observations | MODIS, TRMM, NASA | |
| Soil properties | Landsat, MODIS | |
| Other physical variables (water, fire) | MODIS, NASA | |
| MODIS, Landsat | ||
| Normalized difference vegetation index (NDVI) | Landsat, SPOT, MODIS | |
| Leaf area index (LAI) | MODIS | |
| Enhanced Vegetation Index (EVI) | MODIS | |
| MODIS, Landsat | ||
| Tree height | LiDAR | |
| Canopy roughness | QSCAT | |
| Canopy moisture | Hyperspectral sensor, QSCAT | |
| Spectral heterogeneity/functional types | Hyperspectral sensor, Landsat | |
Description of the study species.
| Family name | Common name | Scientific name | Life form | Origin | Median year of observations | Habitat |
|---|---|---|---|---|---|---|
| Asteraceae | Siam weed | Shrub | Non-native | 2002 | • Humid part of the inter-tropical zone, elevations below 2000 m | |
| • Open secondary habitats | ||||||
| Whitetop Weed | Herb | Non-native | 2005 | • Humid and sub-humid tropics | ||
| • Wide variety of soil types, more preferably in heavier fertile soils | ||||||
| • Disturbed habitats (e.g., roadsides, railway tracks, river, and creek banks, buildings) | ||||||
| Mile-a-Minute | Vine | Non-native | 2003 | • Damp, lowland clearings, or open areas | ||
| • Streams and roadsides, in or near forests, forest plantations, pastures, fence lines, tree crops | ||||||
| Goat weed | Herb | Non-native | 1981 | • Disturbed habitats, roadsides, degraded pasture and cultivated areas | ||
| Convolvulaceae | Bois | Vine | Native | 1956 | • Forests; elevations of 100–1300 m1 | |
| Fabaceae | Giant sensitive plant | Shrub | Non-native | 2000 | • Fertile areas; humid areas with available soil moisture | |
| • Open and disturbed habitats | ||||||
| Catclaw mimosa | Shrub | Non-native | 1999 | • Riparian areas and anthropogenic habitats (agricultural areas) | ||
| • Disturbed and construction sites | ||||||
| White leadtree | Shrub/ Tree | Non-native | 1990 | • Open, often coastal habitats | ||
| • Semi-natural and disturbed habitats | ||||||
| Poaceae | Buffel grass | Grass | Non-native | 1970 | • Tropical regions | |
| • Dry and moist regions in rainfed areas and irrigated crops | ||||||
| • Moderate moisture and light, sandy, well-drained soils at low elevations | ||||||
| Bamboo grass | Grass | Native | 2000 | • Along mesic roadsides, railroad right-of-way ditches, utility right-of-way, etc. Wetland, successional forest, planted forest, forest edges and margins, woodland borders | ||
| • Not in areas with periodic standing water, nor in full, direct sunlight | ||||||
| Polygonaceae | Water hyacinth | Herb | Non-native | 1963 | • Tropical and sub-tropical freshwater lakes and rivers, especially those enriched with plant nutrients, flooded rice | |
| Tamaricaceae | Lantana | Shrub | Non-native | 1982 | • Disturbed areas, pastures, roadsides and sometimes in native forests. | |
| Leguminosae | Bauhinia | Vine | Native | 1957 | • Open forests and thickets in valleys and on slopes; 500–1200 m2 | |
| Kudzu | Vine | Native | 1983 | • Woods, plantation forests, open areas, abandoned fields | ||
| • Wide variety of soil types but does not favor very wet soils | ||||||
| • Wide geographic and climatic range | ||||||
Environmental variables.
| Variables | Type of data | Source |
|---|---|---|
| Bedrock | Soil | |
| Bulk density | Soil | |
| Cation exchange capacity | Soil | |
| Soil texture fraction clay | Soil | |
| Coarse fragments volumetric | Soil | |
| Soil organic carbon stock | Soil | |
| Soil organic carbon content | Soil | |
| Soil texture fraction silt | Soil | |
| Soil texture fraction sand | Soil | |
| Snow/ice | Land cover | |
| Digital elevation model | Elevation | |
| Temperature seasonality | Climate | |
| Max temperature of warmest month | Climate | |
| Min temperature of coldest month | Climate | |
| Temperature annual range | Climate | |
| Mean temperature of wettest quarter | Climate | |
| Mean temperature of driest quarter | Climate | |
| Mean temperature of warmest quarter | Climate | |
| Mean temperature of coldest quarter | Climate | |
| Precipitation of driest month | Climate | |
| Precipitation of wettest quarter | Climate | |
| Precipitation of driest quarter | Climate | |
| Precipitation of coldest quarter | Climate | |
Variability (mean and standard devation) of species-specific AUC (area under the curve) scores, evaluated against the withheld test set of 30% of the presence records, for fourteen invasive weeds in 10 partition runs.
| Species | Number of occurrences | CLIM | RS | COMB |
|---|---|---|---|---|
| 360 | 0.81 ± 0.01 | 0.74 ± 0.02 | ||
| 19 | 0.51 ± 0.16 | 0.76 ± 0.07 | ||
| 110 | 0.85 ± 0.04 | 0.86 ± 0.04 | ||
| 167 | 0.88 ± 0.03 | 0.77 ± 0.03 | ||
| 81 | 0.65 ± 0.05 | 0.84 ± 0.06 | ||
| 162 | 0.77 ± 0.04 | 0.88 ± 0.02 | ||
| 192 | 0.85 ± 0.03 | 0.82 ± 0.02 | ||
| 13 | 0.50 ± 0.10 | 0.72 ± 0.07 | ||
| 96 | 0.72 ± 0.06 | 0.86 ± 0.03 | ||
| 171 | 0.92 ± 0.02 | 0.81 ± 0.04 | ||
| 54 | 0.78 ± 0.07 | 0.85 ± 0.05 | ||
| 19 | 0.66 ± 0.06 | 0.64 ± 0.09 | ||
| 76 | 0.85 ± 0.04 | 0.97 ± 0.01 | ||
| 417 | 0.83 ± 0.02 | 0.84 ± 0.03 | ||
| 0.75 ± 0.12 | 0.84 ± 0.08 | |||
Summary of the mean permutation importance (PI) of fourteen invasive plant species.
| COMB | CLIM | RS | |
|---|---|---|---|
| Mean ± | Mean ± | Mean ± | |
| GPP_CV | 2.1 ± 2.49 | ||
| GPP_Mean | 2.83 ± 3.21 | ||
| Soil pH | 1.32 ± 0.95 | 2.51 ± 5.34 | |
| Barren | 1.21 ± 1.2 | 2.63 ± 2.09 | |
| Cultivated vegetation | 3.83 ± 5.64 | ||
| Deciduous broad leaf trees | |||
| Evergreen broad leaf trees | |||
| Evergreen needle leaf trees | 4.42 ± 9.24 | 6.19 ± 9.4 | |
| Herbaceous vegetation | |||
| Mixed trees | 3.7 ± 4.99 | ||
| Open water | 0.79 ±0.8 | 1.2 ± 0.77 | |
| Regular flooded vegetation | 0.98 ± 1.6 | 2.53 ± 4.86 | |
| Shrubs | 1.77 ± 1.46 | 6.56 ± 9.19 | |
| Urban | 1.07 ± 1.19 | 1.6 ± 1.49 | |
| Annual mean temperature | 4.32 ± 6.57 | 13.27 ± 14.57 | |
| Mean diurnal temperature range | |||
| Isothermality | 12.46 ± 10.98 | ||
| Annual precipitation | 9.06 ± 13.86 | ||
| Precipitation of wettest month | 1.54 ± 1.94 | 3.26 ± 2.52 | |
| Precipitation seasonality | 3.67 ± 4.9 | 5.66 ± 6.56 | |
| Precipitation of warmest quarter | |||