Literature DB >> 28542522

A mutation in porcine pre-miR-15b alters the biogenesis of MiR-15b\16-1 cluster and strand selection of MiR-15b.

Wenyang Sun1,2, Jing Lan2, Lei Chen2, Jinjie Qiu2, Zonggang Luo2,3, Mingzhou Li4, Jinyong Wang2, Jiugang Zhao2, Tinghuan Zhang2, Xi Long2, Jie Chai2, Zunqiang Yan1,2, Zongyi Guo2, Shuangbao Gun1,5.   

Abstract

MicroRNAs (miRNAs) are small non-coding RNAs that are involved in translational regulation of the messenger RNA molecules. Sequence variations in the genes encoding miRNAs could influence their biogenesis and function. MiR-15b plays an important role in cellular proliferation, apoptosis and the cell cycle. Here, we report the identification of a C58T mutation in porcine pre-miR-15b. Through in vitro and in vivo experiments, we determined that this mutation blocks the transition from pri-miRNA to pre-miRNA, alters the strand selection between miR-15b-5p and miR-15b-3p, and obstructs biogenesis of the downstream miR-16-1. These results serve to highlight the importance of miRNA mutations and their impacts on miRNA biogenesis.

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Year:  2017        PMID: 28542522      PMCID: PMC5443575          DOI: 10.1371/journal.pone.0178045

Source DB:  PubMed          Journal:  PLoS One        ISSN: 1932-6203            Impact factor:   3.240


  45 in total

Review 1.  MicroRNAs: small RNAs with a big role in gene regulation.

Authors:  Lin He; Gregory J Hannon
Journal:  Nat Rev Genet       Date:  2004-07       Impact factor: 53.242

2.  A high-throughput method to monitor the expression of microRNA precursors.

Authors:  Thomas D Schmittgen; Jinmai Jiang; Qian Liu; Liuqing Yang
Journal:  Nucleic Acids Res       Date:  2004-02-25       Impact factor: 16.971

3.  Dicer functions in RNA interference and in synthesis of small RNA involved in developmental timing in C. elegans.

Authors:  R F Ketting; S E Fischer; E Bernstein; T Sijen; G J Hannon; R H Plasterk
Journal:  Genes Dev       Date:  2001-10-15       Impact factor: 11.361

4.  Abnormal microRNA-16 locus with synteny to human 13q14 linked to CLL in NZB mice.

Authors:  Elizabeth S Raveche; Erica Salerno; Brian J Scaglione; Vijaya Manohar; Fatima Abbasi; Yi-Chu Lin; Torgny Fredrickson; Pablo Landgraf; Sumant Ramachandra; Konrad Huppi; Jorge R Toro; Vincent E Zenger; Robert A Metcalf; Gerald E Marti
Journal:  Blood       Date:  2007-03-09       Impact factor: 22.113

5.  MicroRNA miR-199a* regulates the MET proto-oncogene and the downstream extracellular signal-regulated kinase 2 (ERK2).

Authors:  Seonhoe Kim; Ui Jin Lee; Mi Na Kim; Eun-Ju Lee; Ji Young Kim; Mi Young Lee; Sorim Choung; Young Joo Kim; Young-Chul Choi
Journal:  J Biol Chem       Date:  2008-05-02       Impact factor: 5.157

6.  The nuclear RNase III Drosha initiates microRNA processing.

Authors:  Yoontae Lee; Chiyoung Ahn; Jinju Han; Hyounjeong Choi; Jaekwang Kim; Jeongbin Yim; Junho Lee; Patrick Provost; Olof Rådmark; Sunyoung Kim; V Narry Kim
Journal:  Nature       Date:  2003-09-25       Impact factor: 49.962

7.  miR-15b and miR-16 modulate multidrug resistance by targeting BCL2 in human gastric cancer cells.

Authors:  Lin Xia; Dexin Zhang; Rui Du; Yanglin Pan; Lina Zhao; Shiren Sun; Liu Hong; Jie Liu; Daiming Fan
Journal:  Int J Cancer       Date:  2008-07-15       Impact factor: 7.396

8.  Mutations in the seed region of human miR-96 are responsible for nonsyndromic progressive hearing loss.

Authors:  Angeles Mencía; Silvia Modamio-Høybjør; Nick Redshaw; Matías Morín; Fernando Mayo-Merino; Leticia Olavarrieta; Luis A Aguirre; Ignacio del Castillo; Karen P Steel; Tamas Dalmay; Felipe Moreno; Miguel Angel Moreno-Pelayo
Journal:  Nat Genet       Date:  2009-04-12       Impact factor: 38.330

9.  MicroRNAs regulate T-cell production of interleukin-9 and identify hypoxia-inducible factor-2α as an important regulator of T helper 9 and regulatory T-cell differentiation.

Authors:  Yogesh Singh; Oliver A Garden; Florian Lang; Bradley S Cobb
Journal:  Immunology       Date:  2016-09       Impact factor: 7.397

10.  rs12976445 variant in the pri-miR-125a correlates with a lower level of hsa-miR-125a and ERBB2 overexpression in breast cancer patients.

Authors:  Tomasz P Lehmann; Konstanty Korski; Mathew Ibbs; Piotr Zawierucha; Sylwia Grodecka-Gazdecka; Paweł P Jagodziński
Journal:  Oncol Lett       Date:  2012-11-22       Impact factor: 2.967

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  5 in total

1.  Inhibition of microRNA-15b-5p Attenuates the Progression of Oral Squamous Cell Carcinoma via Modulating the PTPN4/STAT3 Axis.

Authors:  Xuerong Liu; Yuanyuan Dong; Dan Song
Journal:  Cancer Manag Res       Date:  2020-10-28       Impact factor: 3.989

Review 2.  Update on molecular biomarkers for diagnosis and prediction of prognosis and treatment responses in gastric cancer.

Authors:  Masahiro Sasahara; Mitsuro Kanda; Yasuhiro Kodera
Journal:  Histol Histopathol       Date:  2021-03-09       Impact factor: 2.303

3.  Determination of genetic associations between indels in 11 candidate genes and milk composition traits in Chinese Holstein population.

Authors:  Jianping Jiang; Lin Liu; Yahui Gao; Lijun Shi; Yanhua Li; Weijun Liang; Dongxiao Sun
Journal:  BMC Genet       Date:  2019-05-28       Impact factor: 2.797

4.  Exosomal transfer of miR-15b-3p enhances tumorigenesis and malignant transformation through the DYNLT1/Caspase-3/Caspase-9 signaling pathway in gastric cancer.

Authors:  Shuchun Wei; Lei Peng; Jiajia Yang; Huaiming Sang; Duochen Jin; Xuan Li; Meihong Chen; Weifeng Zhang; Yini Dang; Guoxin Zhang
Journal:  J Exp Clin Cancer Res       Date:  2020-02-10

5.  Application of the targeted sequencing approach reveals the single nucleotide polymorphism (SNP) repertoire in microRNA genes in the pig genome.

Authors:  Klaudia Pawlina-Tyszko; Ewelina Semik-Gurgul; Artur Gurgul; Maria Oczkowicz; Tomasz Szmatoła; Monika Bugno-Poniewierska
Journal:  Sci Rep       Date:  2021-05-10       Impact factor: 4.379

  5 in total

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